Guide to the Human Genome
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Name: KRTAP2-1 Sequence: fasta or formatted (128aa) NCBI GI: 183396797
Description:

keratin associated protein KRTAP2.1A

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.6          2           1
 C cysteine           27.3         35           3
 D aspartate           1.6          2           1
 E glutamate           1.6          2           1
 F phenylalanine       0.8          1           1
 G glycine             5.5          7           3
 H histidine           0.0          0           0
 I isoleucine          1.6          2           1
 K lysine              0.0          0           0
 L leucine             1.6          2           1
 M methionine          0.8          1           1
 N asparagine          0.0          0           0
 P proline            14.1         18           2
 Q glutamine           4.7          6           1
 R arginine            8.6         11           2
 S serine             10.2         13           2
 T threonine          11.7         15           2
 V valine              7.0          9           2
 W tryptophan          0.8          1           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein KRTAP2.1A 
KRTAP2-4              0.990   keratin associated protein 2-4 
LOC730755             0.990   PREDICTED: similar to keratin associated protein 2-...
KRTAP2-2              0.928   keratin associated protein 2-2 
KRTAP4-3              0.352   keratin associated protein 4-3 
KRTAP4-2              0.348   keratin associated protein 4-2 
KRTAP4-9              0.345   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-12             0.345   keratin associated protein 4-12 
KRTAP4-5              0.341   keratin associated protein 4-5 
KRTAP4-4              0.334   keratin associated protein 4.4 
KRTAP4-11             0.334   keratin associated protein 4-11 
KRTAP4-9              0.331   keratin associated protein 4-9 
KRTAP4-9              0.331   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.328   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.324   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.324   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-7              0.321   keratin associated protein 4-7 
KRTAP4-7              0.321   PREDICTED: keratin associated protein 4-7 
KRTAP4-8              0.310   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.310   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.307   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.307   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.307   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.307   keratin associated protein 4.8 
KRTAP4-1              0.290   keratin associated protein 4-1 
LOC728318             0.276   PREDICTED: hypothetical protein 
LOC728318             0.276   PREDICTED: hypothetical protein 
LOC728318             0.276   PREDICTED: hypothetical protein 
LOC728341             0.269   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-2              0.266   keratin associated protein 9.2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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