Guide to the Human Genome
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Name: SOCS4 Sequence: fasta or formatted (440aa) NCBI GI: 18254466
Description:

suppressor of cytokine signaling 4

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt mRNA [440aa] suppressor of cytokine signaling 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         16           2
 C cysteine            3.9         17           1
 D aspartate           7.5         33           2
 E glutamate           6.1         27           2
 F phenylalanine       3.6         16           2
 G glycine             3.4         15           1
 H histidine           3.9         17           1
 I isoleucine          5.2         23           1
 K lysine              6.6         29           2
 L leucine             9.1         40           2
 M methionine          2.0          9           1
 N asparagine          5.2         23           3
 P proline             5.5         24           2
 Q glutamine           3.4         15           2
 R arginine            6.4         28           2
 S serine             10.9         48           2
 T threonine           4.8         21           2
 V valine              4.3         19           1
 W tryptophan          1.6          7           1
 Y tyrosine            3.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of cytokine signaling 4 
SOCS4                 1.000   suppressor of cytokine signaling 4 
SOCS5                 0.457   suppressor of cytokine signaling 5 
SOCS5                 0.457   suppressor of cytokine signaling 5 
SOCS6                 0.079   suppressor of cytokine signaling 6 
SOCS7                 0.060   suppressor of cytokine signaling 7 
CISH                  0.055   cytokine-inducible SH2-containing protein isoform 1...
CISH                  0.055   cytokine-inducible SH2-containing protein isoform 2 ...
SOCS2                 0.053   suppressor of cytokine signaling-2 
SOCS1                 0.030   suppressor of cytokine signaling 1 
SOCS3                 0.027   suppressor of cytokine signaling 3 
PIK3R3                0.018   phosphoinositide-3-kinase, regulatory subunit 3 (p5...
PIK3R3                0.018   phosphoinositide-3-kinase, regulatory subunit 3 (p5...
NCK1                  0.017   NCK adaptor protein 1 
CRK                   0.016   v-crk sarcoma virus CT10 oncogene homolog isoform a ...
CRK                   0.016   v-crk sarcoma virus CT10 oncogene homolog isoform b ...
DAPP1                 0.016   dual adaptor of phosphotyrosine and 3-phosphoinosit...
PIK3R2                0.016   phosphoinositide-3-kinase, regulatory subunit 2 (beta...
NCK2                  0.016   NCK adaptor protein 2 isoform A 
NCK2                  0.016   NCK adaptor protein 2 isoform A 
PLCG1                 0.013   phospholipase C, gamma 1 isoform a 
PLCG1                 0.013   phospholipase C, gamma 1 isoform b 
RAB40C                0.013   RAB40C, member RAS oncogene family 
PIK3R1                0.011   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.011   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.011   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
CHN2                  0.011   beta chimerin isoform 2 
RAB40A                0.011   RAB40A, member RAS oncogene family 
PLCG2                 0.011   phospholipase C, gamma 2 
ABL2                  0.009   arg tyrosine kinase isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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