VPS18 9666

Name: VPS18	Sequence: fasta or formatted (973aa)		NCBI GI: 17978485
Description: vacuolar protein sorting 18		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 98 2 C cysteine 2.5 24 1 D aspartate 4.8 47 2 E glutamate 8.9 87 3 F phenylalanine 4.3 42 2 G glycine 5.8 56 2 H histidine 3.3 32 2 I isoleucine 3.2 31 1 K lysine 3.7 36 2 L leucine 12.5 122 4 M methionine 1.5 15 2 N asparagine 1.6 16 1 P proline 5.2 51 3 Q glutamine 4.7 46 2 R arginine 7.4 72 2 S serine 5.5 54 2 T threonine 3.8 37 2 V valine 5.9 57 2 W tryptophan 1.1 11 1 Y tyrosine 4.0 39 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vacuolar protein sorting 18 VPS11 0.019 vacuolar protein sorting 11 VPS41 0.010 vacuolar protein sorting 41 isoform 2 VPS41 0.010 vacuolar protein sorting 41 isoform 1 RNF32 0.006 ring finger protein 32 MYH10 0.005 myosin, heavy polypeptide 10, non-muscle SYNC 0.004 syncoilin, intermediate filament 1 isoform 2 SYNC 0.004 syncoilin, intermediate filament 1 isoform 1 LOC390561 0.004 PREDICTED: similar to hect domain and RLD 2 LOC653720 0.004 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.004 PREDICTED: Golgin subfamily A member 8-like protein... CCDC88C 0.004 DVL-binding protein DAPLE TRIM77 0.004 PREDICTED: tripartite motif-containing 77 TRIM77 0.004 PREDICTED: tripartite motif-containing 77 LOC100289112 0.004 PREDICTED: hypothetical protein XP_002343148 TRIM77 0.004 tripartite motif-containing 77 PDZRN3 0.004 PDZ domain containing ring finger 3 LOC653125 0.004 PREDICTED: similar to Golgin subfamily A member 8-l... PCNT 0.004 pericentrin ZNF521 0.004 zinc finger protein 521 MYH13 0.004 myosin, heavy polypeptide 13, skeletal muscle [Homo... GAS7 0.004 growth arrest-specific 7 isoform d GAS7 0.004 growth arrest-specific 7 isoform c GAS7 0.004 growth arrest-specific 7 isoform b GAS7 0.004 growth arrest-specific 7 isoform a EFCAB4B 0.004 EF-hand calcium binding domain 4B isoform c EFCAB4B 0.004 EF-hand calcium binding domain 4B isoform b EFCAB4B 0.004 EF-hand calcium binding domain 4B isoform a CAPN7 0.004 calpain 7 AKAP9 0.003 A-kinase anchor protein 9 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.