CCDC47 9560

Name: CCDC47	Sequence: fasta or formatted (483aa)		NCBI GI: 171906582
Description: coiled-coil domain containing 47		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 25 2 C cysteine 1.0 5 2 D aspartate 8.7 42 2 E glutamate 11.6 56 2 F phenylalanine 4.3 21 1 G glycine 4.6 22 1 H histidine 1.7 8 1 I isoleucine 3.9 19 2 K lysine 8.5 41 2 L leucine 8.3 40 2 M methionine 4.6 22 2 N asparagine 4.6 22 1 P proline 3.1 15 1 Q glutamine 5.0 24 1 R arginine 5.0 24 2 S serine 5.4 26 3 T threonine 5.4 26 2 V valine 6.0 29 2 W tryptophan 0.6 3 1 Y tyrosine 2.7 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 47 CHAF1A 0.027 chromatin assembly factor 1, subunit A (p150) NCL 0.023 nucleolin MAP7D2 0.023 MAP7 domain containing 2 LOC100133599 0.022 PREDICTED: hypothetical protein MAP7 0.022 microtubule-associated protein 7 LOC100133599 0.021 PREDICTED: hypothetical protein LOC100294088 0.021 PREDICTED: hypothetical protein, partial ARGLU1 0.021 arginine and glutamate rich 1 GIGYF2 0.021 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.021 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.021 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.021 GRB10 interacting GYF protein 2 isoform b ACBD3 0.021 acyl-Coenzyme A binding domain containing 3 MYT1 0.020 myelin transcription factor 1 LOC645202 0.020 PREDICTED: hypothetical protein LOC645202 TCHH 0.020 trichohyalin UBTF 0.020 upstream binding transcription factor, RNA polymera... UBTF 0.020 upstream binding transcription factor, RNA polymera... UBTF 0.020 upstream binding transcription factor, RNA polymerase... SFRS17A 0.020 DNA segment on chromosome X and Y (unique) 155 expre... LOC283685 0.019 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC440243 0.019 PREDICTED: Putative golgin subfamily A member 6-lik... ANP32B 0.019 acidic (leucine-rich) nuclear phosphoprotein 32 famil... UPF2 0.019 UPF2 regulator of nonsense transcripts homolog [Homo... UPF2 0.019 UPF2 regulator of nonsense transcripts homolog [Homo... INCENP 0.019 inner centromere protein antigens 135/155kDa isofor... INCENP 0.019 inner centromere protein antigens 135/155kDa isofor... UPF3A 0.019 UPF3 regulator of nonsense transcripts homolog A iso... UPF3A 0.019 UPF3 regulator of nonsense transcripts homolog A iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.