Guide to the Human Genome
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Name: SCYL3 Sequence: fasta or formatted (742aa) NCBI GI: 170784850
Description:

SCY1-like 3 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {688aa} SCY1-like 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         36           3
 C cysteine            2.2         16           1
 D aspartate           5.0         37           2
 E glutamate           9.4         70           3
 F phenylalanine       5.0         37           2
 G glycine             4.0         30           3
 H histidine           2.7         20           2
 I isoleucine          4.6         34           1
 K lysine              6.1         45           3
 L leucine            11.9         88           3
 M methionine          1.3         10           1
 N asparagine          3.1         23           2
 P proline             7.7         57           2
 Q glutamine           3.8         28           2
 R arginine            3.1         23           1
 S serine             10.0         74           3
 T threonine           5.5         41           2
 V valine              7.4         55           3
 W tryptophan          1.3         10           1
 Y tyrosine            1.1          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SCY1-like 3 isoform 2 
SCYL3                 0.896   SCY1-like 3 isoform 1 
SCYL1                 0.069   SCY1-like 1 isoform B 
SCYL1                 0.069   SCY1-like 1 isoform A 
SCYL2                 0.031   SCY1-like 2 protein 
PLK3                  0.020   polo-like kinase 3 
PKMYT1                0.017   protein kinase Myt1 isoform 2 
PKMYT1                0.017   protein kinase Myt1 isoform 1 
PLK2                  0.014   polo-like kinase 2 
PLK4                  0.012   polo-like kinase 4 
CHEK2                 0.012   protein kinase CHK2 isoform c 
CHEK2                 0.012   protein kinase CHK2 isoform a 
TAOK2                 0.011   TAO kinase 2 isoform 1 
TAOK2                 0.011   TAO kinase 2 isoform 2 
ACRC                  0.009   ACRC protein 
PRKCH                 0.009   protein kinase C, eta 
PLK1                  0.007   polo-like kinase 1 
TESK2                 0.007   testis-specific protein kinase 2 
FRK                   0.007   fyn-related kinase 
CAMKK2                0.007   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.007   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.007   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.007   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.007   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.007   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.007   calcium/calmodulin-dependent protein kinase kinase 2...
LOC100134138          0.007   PREDICTED: similar to mucin, partial 
NEK11                 0.007   NIMA-related kinase 11 isoform 2 
NEK11                 0.007   NIMA-related kinase 11 isoform 3 
NEK11                 0.007   NIMA-related kinase 11 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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