Guide to the Human Genome
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Name: CHEK2 Sequence: fasta or formatted (543aa) NCBI GI: 6005850
Description:

protein kinase CHK2 isoform a

Referenced in:

DNases, Recombination, and DNA Repair
p53 Pathway

Other entries for this name:
alt prot [514aa] protein kinase CHK2 isoform b
alt prot [586aa] protein kinase CHK2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         33           2
 C cysteine            2.4         13           1
 D aspartate           5.0         27           2
 E glutamate           9.0         49           2
 F phenylalanine       3.9         21           2
 G glycine             5.5         30           2
 H histidine           2.0         11           1
 I isoleucine          4.8         26           2
 K lysine              7.2         39           2
 L leucine             9.4         51           2
 M methionine          1.3          7           1
 N asparagine          3.7         20           3
 P proline             4.8         26           2
 Q glutamine           4.1         22           2
 R arginine            4.8         26           2
 S serine             10.1         55           4
 T threonine           5.5         30           2
 V valine              6.1         33           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase CHK2 isoform a 
CHEK2                 0.980   protein kinase CHK2 isoform c 
CHEK2                 0.931   protein kinase CHK2 isoform b 
CAMK1G                0.183   calcium/calmodulin-dependent protein kinase IG [Homo...
CAMK1                 0.182   calcium/calmodulin-dependent protein kinase I 
CAMK1D                0.178   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.178   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK4                 0.170   calcium/calmodulin-dependent protein kinase IV 
PNCK                  0.158   pregnancy upregulated non-ubiquitously expressed Ca...
PNCK                  0.158   pregnancy upregulated non-ubiquitously expressed Ca...
PRKD3                 0.156   protein kinase D3 
PRKD1                 0.156   protein kinase D1 
DCLK3                 0.153   doublecortin-like kinase 3 
PRKD2                 0.151   protein kinase D2 isoform B 
PRKD2                 0.151   protein kinase D2 isoform A 
PRKD2                 0.151   protein kinase D2 isoform A 
PRKD2                 0.151   protein kinase D2 isoform A 
CAMK2D                0.149   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.149   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.149   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.149   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.149   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.149   calcium/calmodulin-dependent protein kinase II delta...
DCLK2                 0.146   doublecortin-like kinase 2 isoform b 
DCLK2                 0.146   doublecortin-like kinase 2 isoform a 
PSKH1                 0.145   protein serine kinase H1 
DCLK1                 0.145   doublecortin-like kinase 1 
CAMK2G                0.144   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.144   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.144   calcium/calmodulin-dependent protein kinase II gamma...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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