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Search of human proteins with 170650705
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|170650705 transforming growth factor beta regulator 1 [Homo
sapiens]
(411 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|170650705 transforming growth factor beta regulator 1 [Homo s... 829 0.0
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 71 2e-12
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 66 7e-11
gi|27734727 INO80 complex subunit E [Homo sapiens] 41 0.002
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 40 0.005
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 37 0.033
gi|22748973 protein interacting with cyclin A1 [Homo sapiens] 36 0.056
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 35 0.095
gi|19923497 echinoderm microtubule associated protein like 4 iso... 35 0.12
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 34 0.21
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 33 0.36
gi|38787970 tensin like C1 domain containing phosphatase isoform... 33 0.36
gi|38787957 tensin like C1 domain containing phosphatase isoform... 33 0.36
gi|38787941 tensin like C1 domain containing phosphatase isoform... 33 0.36
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 33 0.61
gi|25777615 proteasome 26S non-ATPase subunit 7 [Homo sapiens] 33 0.61
gi|32483374 nucleolar protein 5A [Homo sapiens] 32 0.80
gi|27262622 neuron navigator 1 [Homo sapiens] 32 1.0
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ... 32 1.4
gi|45505178 cancer antigen 1 [Homo sapiens] 31 1.8
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 31 1.8
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 31 1.8
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 31 1.8
gi|187936946 hypothetical protein LOC84140 [Homo sapiens] 31 1.8
gi|93277115 ataxin 7-like 2 [Homo sapiens] 31 1.8
gi|96975038 coiled-coil domain containing 100 [Homo sapiens] 31 2.3
gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens] 31 2.3
gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens] 31 2.3
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 30 3.0
gi|58530840 desmoplakin isoform I [Homo sapiens] 30 4.0
>gi|170650705 transforming growth factor beta regulator 1 [Homo
sapiens]
Length = 411
Score = 829 bits (2142), Expect = 0.0
Identities = 411/411 (100%), Positives = 411/411 (100%)
Query: 1 MSLLDGLASSPRAPLQSSKARMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIA 60
MSLLDGLASSPRAPLQSSKARMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIA
Sbjct: 1 MSLLDGLASSPRAPLQSSKARMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIA 60
Query: 61 RLEEKFLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVASSVGTIQGAGP 120
RLEEKFLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVASSVGTIQGAGP
Sbjct: 61 RLEEKFLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVASSVGTIQGAGP 120
Query: 121 ISGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARKLVQPIALDPSGR 180
ISGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARKLVQPIALDPSGR
Sbjct: 121 ISGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARKLVQPIALDPSGR 180
Query: 181 PVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKD 240
PVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKD
Sbjct: 181 PVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKD 240
Query: 241 GGVQPQFEIVPEDDPQNAIVSSSADACHAELLRTISTTMGKLMPNLLPAGADFFGFSHPA 300
GGVQPQFEIVPEDDPQNAIVSSSADACHAELLRTISTTMGKLMPNLLPAGADFFGFSHPA
Sbjct: 241 GGVQPQFEIVPEDDPQNAIVSSSADACHAELLRTISTTMGKLMPNLLPAGADFFGFSHPA 300
Query: 301 IHNLIQSCPGARKCINYQWVKFDVCKPGDGQLPEGLPENDAAMSFEAFQRQIFDEDQNDP 360
IHNLIQSCPGARKCINYQWVKFDVCKPGDGQLPEGLPENDAAMSFEAFQRQIFDEDQNDP
Sbjct: 301 IHNLIQSCPGARKCINYQWVKFDVCKPGDGQLPEGLPENDAAMSFEAFQRQIFDEDQNDP 360
Query: 361 LLPGSLDLPELQPAAFVSSYQPMYLTHEPLVDTHLQHLKSPSQGSPIQSSD 411
LLPGSLDLPELQPAAFVSSYQPMYLTHEPLVDTHLQHLKSPSQGSPIQSSD
Sbjct: 361 LLPGSLDLPELQPAAFVSSYQPMYLTHEPLVDTHLQHLKSPSQGSPIQSSD 411
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 71.2 bits (173), Expect = 2e-12
Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 187 LGGLTVYSLGEIITDRPG-FHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKDGGVQP 245
+GGL +++G+++ + FH +A+YPVGY +TRIY S++ +++C Y C I + +P
Sbjct: 5180 VGGLVFHAIGQLLPHQMADFHSATALYPVGYEATRIYWSLRTNNRRCCYRCSIGENNGRP 5239
Query: 246 QF--EIVPEDDPQNAIVSSSADACHAELLRTIS-----TTMGKLMPNLLPAGADFFGFSH 298
+F +++ + +S A ++ ++ M +L P L G + FG +
Sbjct: 5240 EFVIKVIEQGLEDLVFTDASPQAVWNRIIEPVAAMRKEADMLRLFPEYL-KGEELFGLTV 5298
Query: 299 PAIHNLIQSCPGARKCINY 317
A+ + +S PG C NY
Sbjct: 5299 HAVLRIAESLPGVESCQNY 5317
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 65.9 bits (159), Expect = 7e-11
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)
Query: 187 LGGLTVYSLGEIITDR-PGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKDGGVQP 245
+G L +++G+++ + FH A++PVGY ++R+Y S + +++C Y C I++ +P
Sbjct: 4550 VGSLIFHTIGQLLPQQMQAFHSPKALFPVGYEASRLYWSTRYANRRCRYLCSIEEKDGRP 4609
Query: 246 QFEI-VPEDDPQNAIVSS-SADACHAELLRTISTTMGKL-MPNLLPA---GADFFGFSHP 299
F I + E ++ ++S S ++L ++ K M L PA G D FG +
Sbjct: 4610 VFVIRIVEQGHEDLVLSDISPKGVWDKILEPVACVRKKSEMLQLFPAYLKGEDLFGLTVS 4669
Query: 300 AIHNLIQSCPGARKCINY 317
A+ + +S PG C NY
Sbjct: 4670 AVARIAESLPGVEACENY 4687
>gi|27734727 INO80 complex subunit E [Homo sapiens]
Length = 244
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 34 YRLKYLRLRKAAKATVFENAAICDEIARLEEKFLKAKEERRYLLKKLLQLQALTEGEVQA 93
Y+ KY L++ K ++E+ +E+ + + K LK ++ +LL +LLQ + + E +
Sbjct: 11 YKKKYRNLKRKLKFLIYEHECFQEELRKAQRKLLKVSRDKSFLLDRLLQYENVDEDSSDS 70
Query: 94 AAPSHSSSLPLTYGVASSVGTIQGAGPISGPSTGAEEP 131
A + SS T G T S P GA P
Sbjct: 71 DATA-SSDNSETEGTPKLSDTPAPKRKRSPPLGGAPSP 107
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 39.7 bits (91), Expect = 0.005
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 187 LGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQI---KDGGV 243
+G +T+ LG I+ D D+ ++P+GY +R+Y S ++C+YTC+I + V
Sbjct: 2023 IGSMTIDCLG-ILNDLSDCEDK--LFPIGYQCSRVYWSTTDARKRCVYTCKIVECRPPVV 2079
Query: 244 QPQFEIVPEDDPQNAIVSS 262
+P E D I S
Sbjct: 2080 EPDINSTVEHDENRTIAHS 2098
Score = 28.9 bits (63), Expect = 8.9
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 290 GADFFGFSHPAIHNLIQSCPGARKCINYQWVKFDVCKPGDGQLPEGLPENDA 341
G G H A+ LI+ GA+ C NY KF KP + P P A
Sbjct: 3716 GLRMLGILHDAVVFLIEQLSGAKHCRNY---KFRFHKPEEANEPPLNPHGSA 3764
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 37.0 bits (84), Expect = 0.033
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 95 APSHSSSLPLTYGVASSVGTIQGAGPI-SGPSTGAEEPFGKKTKKEKKEKGKENNKLEVL 153
+P S S + A V + P S P +E GKK KK+K +K K++ K +
Sbjct: 769 SPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKH 828
Query: 154 KKTCKKKKMAGGARKLVQPIAL 175
KK K+K +A A V P A+
Sbjct: 829 KKHKKEKAVAAAAAAAVTPAAI 850
>gi|22748973 protein interacting with cyclin A1 [Homo sapiens]
Length = 336
Score = 36.2 bits (82), Expect = 0.056
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 107 GVASSVGTIQGAGPISGPSTGAEEPFGKKT-----KKEKKEKGKENNKLEVLKKT-CKKK 160
G + + GT PI+ +E P GK KK KK+K KE +K E+ +K KKK
Sbjct: 173 GTSMATGTPDSTAPIT--IWRSESPTGKGQGSKVIKKVKKKKEKEKDKEEMDEKAKLKKK 230
Query: 161 KMAGGARKLVQPIALDPS 178
G K P+ L+PS
Sbjct: 231 AKKGQLTKKKSPVKLEPS 248
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 35.4 bits (80), Expect = 0.095
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Query: 239 KDGGVQPQFEIVPEDDPQNAIVSSSADACHAELLRTISTTMGKLMPNLLP----AGADFF 294
K G +FEI ED ++ + S + L+ + G L +GA
Sbjct: 2408 KRTGPHLRFEISSEDG--FSVEAESLEGAWRTLIEKVQEARGHARLRHLSFSGMSGARLL 2465
Query: 295 GFSHPAIHNLIQSCPGARKCINYQWVKFDVCKPGDGQLPEGLPENDAAMSFEAFQRQIFD 354
G H A+ L + PGA++C +Y KF + G+GQ L + AA + ++ FD
Sbjct: 2466 GIHHDAVIFLAEQLPGAQRCQHY---KFRYHQQGEGQEEPPLNPHGAARAEVYLRKCTFD 2522
Score = 30.0 bits (66), Expect = 4.0
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 187 LGGLTVYSLGEI--ITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQI 238
+G + + SLG + ++D G ++P+GY +R+Y S ++C Y C+I
Sbjct: 1732 IGSIRIDSLGTLSDLSDCEG-----RLFPIGYQCSRLYWSTVDARRRCWYRCRI 1780
>gi|19923497 echinoderm microtubule associated protein like 4
isoform a [Homo sapiens]
Length = 981
Score = 35.0 bits (79), Expect = 0.12
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 2 SLLDGLASSPRAPLQSSKARMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIAR 61
SL D ++++ + +Q R+ L + Q ++ + L KAA A V AI ++
Sbjct: 7 SLDDSISAASTSDVQD---RLSALESRVQQQEDEITVL---KAALADVLRRLAISEDHVA 60
Query: 62 LEEKFLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVASSVGTIQGAGPI 121
+K + +K + + ++ + +T G PSH+S++ + + T+ A
Sbjct: 61 SVKKSVSSKGQPSP--RAVIPMSCITNGSGANRKPSHTSAVSI-----AGKETLSSAAK- 112
Query: 122 SGPSTGAEEPFGKKTKKEKKEKGKENNKL 150
SG E+P G++ KKE+ ++ ++
Sbjct: 113 SGTEKKKEKPQGQREKKEESHSNDQSPQI 141
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 34.3 bits (77), Expect = 0.21
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 115 IQGAGPISGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKK 160
++ AGP G E K KK+KK+KGKE + KK+ KK
Sbjct: 632 LEEAGPKESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKK 677
Score = 28.9 bits (63), Expect = 8.9
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 86 LTEGEVQAAAPSHSSSLPLTYGVASSVGTIQGAG-PISGPSTGAEEPFGKKTKKEKKEKG 144
+T+ + A P LPL + + G G +GP +EE KT ++K+K
Sbjct: 598 VTDEDEGPAEPPPPPKLPLPAFRLKNDSDLFGLGLEEAGPKESSEEGKEGKTPSKEKKKK 657
Query: 145 KENNKLEVLKKTCKKKK 161
K+ K E K KK K
Sbjct: 658 KKKGKEEEEKAAKKKSK 674
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 33.5 bits (75), Expect = 0.36
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 129 EEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARK------LVQPIALDPSGRPV 182
E+ KK KK+KKEK KE + E K+ +++K K V+P+AL PS PV
Sbjct: 700 EKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEKHKHEKIKVEPVALAPS--PV 757
Query: 183 FP 184
P
Sbjct: 758 IP 759
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 33.5 bits (75), Expect = 0.36
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 357 QNDPLLPGSLDLPELQPAAFVSSYQPMYLTHEPLVDTHLQHLKSPSQGSP 406
+NDP + S+D +PA SY+ HE VD L H + P GSP
Sbjct: 311 RNDPSV--SVDYNTTEPAVRWDSYENFNQHHEDSVDGSLTHTRGPLDGSP 358
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 33.5 bits (75), Expect = 0.36
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 357 QNDPLLPGSLDLPELQPAAFVSSYQPMYLTHEPLVDTHLQHLKSPSQGSP 406
+NDP + S+D +PA SY+ HE VD L H + P GSP
Sbjct: 435 RNDPSV--SVDYNTTEPAVRWDSYENFNQHHEDSVDGSLTHTRGPLDGSP 482
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 33.5 bits (75), Expect = 0.36
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 357 QNDPLLPGSLDLPELQPAAFVSSYQPMYLTHEPLVDTHLQHLKSPSQGSP 406
+NDP + S+D +PA SY+ HE VD L H + P GSP
Sbjct: 445 RNDPSV--SVDYNTTEPAVRWDSYENFNQHHEDSVDGSLTHTRGPLDGSP 492
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 32.7 bits (73), Expect = 0.61
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 50 FENAAICDEIARLEEKFLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVA 109
F+ + + A +E+ K ++E + L+KL + + L G+ + S V
Sbjct: 223 FKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVK 282
Query: 110 SSVGTIQGAGPISGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARKL 169
S V G P S AE P + E +K K+ K + K+ +K+K G ++
Sbjct: 283 SKVTVDTGVIPASEEK--AETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKAT 340
Query: 170 VQ 171
V+
Sbjct: 341 VK 342
Score = 31.2 bits (69), Expect = 1.8
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 8 ASSPRAPLQSSKA-RMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIARLEEKF 66
A +P A ++ + KK KK + EK + + + +KATV A+ + +A+L+E+
Sbjct: 299 AETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATV---KAMQEALAKLKEEE 355
Query: 67 LKAKEERRYLLKKLLQLQALTEGE 90
+ K E +K+L +L+A + E
Sbjct: 356 ERQKREEEERIKRLEELEAKRKEE 379
Score = 30.4 bits (67), Expect = 3.0
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 124 PSTGAEEPFGKKTKKEKKEKGK-----ENNKLEVLKKTCKKKKMA 163
P+ EE F K KK+K +KGK +N+ E+ K K KK A
Sbjct: 83 PTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTA 127
>gi|25777615 proteasome 26S non-ATPase subunit 7 [Homo sapiens]
Length = 324
Score = 32.7 bits (73), Expect = 0.61
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 127 GAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKK 161
G E+ KK +KE KEK K+ K +V K+ K+KK
Sbjct: 290 GQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
>gi|32483374 nucleolar protein 5A [Homo sapiens]
Length = 594
Score = 32.3 bits (72), Expect = 0.80
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 16/163 (9%)
Query: 13 APLQSSKARMKKLPKKSQNEKYRLKYLRLRKAAKATVF-ENAAICDEIARLEEKFLKAKE 71
A +Q+ +A + K + EK RLK + R AA A EN++ E EE K K+
Sbjct: 424 AMVQAEEAAAEITRKLEKQEKKRLKKEKKRLAALALASSENSSSTPE--ECEEMSEKPKK 481
Query: 72 ERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVASSVGTIQGAGPI---------- 121
+++ +++ Q + + + + P S ++S + G+ I
Sbjct: 482 KKKQKPQEVPQENGMEDPSISFSKPKKKKSFSKEELMSSDLEETAGSTSIPKRKKSTPKE 541
Query: 122 ---SGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKK 161
+ P KK +K KE+ + E + K+ KKK
Sbjct: 542 ETVNDPEEAGHRSGSKKKRKFSKEEPVSSGPEEAVGKSSSKKK 584
>gi|27262622 neuron navigator 1 [Homo sapiens]
Length = 1874
Score = 32.0 bits (71), Expect = 1.0
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 21/190 (11%)
Query: 7 LASSPRAPLQSSKARM-----KKLPKKSQNEKYRLKYLRLRKAAKATV---FENAAICDE 58
LASS + S++ RM +KL ++ ++ + ++ L + +A A + FE + + +
Sbjct: 1063 LASSASSTYSSAEERMQSEQIRKLRRELESSQEKVATLTSQLSANANLVAAFEQSLV-NM 1121
Query: 59 IARL-------EEK---FLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGV 108
+RL EEK L +E +L KK + QA+ +G + A+ +
Sbjct: 1122 TSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEAQAVIQGALNASETTPKELRIKRQNS 1181
Query: 109 ASSVGTIQGAGPISGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARK 168
+ S+ ++ S S G+ + K KK+K NK +KK K +
Sbjct: 1182 SDSISSLNSI--TSHSSIGSSKDADAKKKKKKSWLRSSFNKAFSIKKGPKSASSYSDIEE 1239
Query: 169 LVQPIALDPS 178
+ P + PS
Sbjct: 1240 IATPDSSAPS 1249
>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
sapiens]
Length = 532
Score = 31.6 bits (70), Expect = 1.4
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Query: 56 CDEIARLEEKFLKAKEERRYLLKKLLQLQALTEG--EVQAAAPSHSSSLPLTYGVASSVG 113
C + E+ LK +R Y L+KLL + A +G V H P + S
Sbjct: 346 CHTLKGTEQPTLKKNNDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTA 405
Query: 114 TIQGAGPISGPSTGAEEPFGKKTKKEKKEKGKENNK 149
PI EE + + EK KG E +
Sbjct: 406 AHTAYKPIGSTGAAGEEEL-RVIQPEKWFKGTETGQ 440
>gi|45505178 cancer antigen 1 [Homo sapiens]
Length = 641
Score = 31.2 bits (69), Expect = 1.8
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 16 QSSKARMKKLPKKSQN-----EKYRLKYLRLRKAAKATVFENAAICDEIARLEEKFLKAK 70
Q K+R++KL + +N E R K ++L++ ENA + ++AR EE+ K
Sbjct: 367 QKLKSRLEKLLTQVRNLQFMSENERTKNIKLQQQINEVKNENAKLKQQVARSEEQNYVPK 426
Query: 71 EERRYLLKKLLQLQALTEGEVQAAAPSHSSSLP 103
E L +L ++ L + +HS+ LP
Sbjct: 427 FETAQLKDQLEEV--LKSDITKDTKTTHSNLLP 457
>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
Length = 651
Score = 31.2 bits (69), Expect = 1.8
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Query: 56 CDEIARLEEKFLKAKEERRYLLKKLLQLQALTEG--EVQAAAPSHSSSLPLTYGVASSVG 113
C + E+ LK +R Y L+KLL + A +G V H P + S
Sbjct: 346 CHTLKGTEQPTLKKNNDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTA 405
Query: 114 TIQGAGPISGPSTGAEEPFGKKTKKEKKEKGKENNK 149
PI EE + + EK KG E +
Sbjct: 406 AHTAYKPIGSTGAAGEEEL-QVIQPEKWFKGTETGQ 440
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 31.2 bits (69), Expect = 1.8
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 134 KKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARK 168
KK KK+KK+K K+ K + KK KKKK RK
Sbjct: 112 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRK 146
Score = 30.8 bits (68), Expect = 2.3
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 120 PISGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKK 161
P+ G E+ +K KK+KK+K K+ K + KK KKKK
Sbjct: 95 PLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKK 136
Score = 30.8 bits (68), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 134 KKTKKEKKEKGKENNKLEVLKKTCKKKKMAG 164
KK KK+KK K K K + KK KKKK G
Sbjct: 133 KKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
Score = 30.0 bits (66), Expect = 4.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 134 KKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARK 168
KK KK+KK+K K+ K + KK KKK+ RK
Sbjct: 114 KKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRK 148
Score = 29.6 bits (65), Expect = 5.2
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 129 EEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARK 168
EE K+ +K+KK+K K+ K + KK KKKK RK
Sbjct: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRK 142
Score = 28.9 bits (63), Expect = 8.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 134 KKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARK 168
KK KK+KK+K K+ K + KK K+K+ RK
Sbjct: 116 KKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
Score = 28.9 bits (63), Expect = 8.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 134 KKTKKEKKEKGKENNKLEVLKKTCKKKKMAGGARK 168
KK KK+KK+K K+ K + KK K+K+ RK
Sbjct: 118 KKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK 152
>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
Length = 651
Score = 31.2 bits (69), Expect = 1.8
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Query: 56 CDEIARLEEKFLKAKEERRYLLKKLLQLQALTEG--EVQAAAPSHSSSLPLTYGVASSVG 113
C + E+ LK +R Y L+KLL + A +G V H P + S
Sbjct: 346 CHTLKGTEQPTLKKNNDRSYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTA 405
Query: 114 TIQGAGPISGPSTGAEEPFGKKTKKEKKEKGKENNK 149
PI EE + + EK KG E +
Sbjct: 406 AHTAYKPIGSTGAAGEEEL-QVIQPEKWFKGTETGQ 440
>gi|187936946 hypothetical protein LOC84140 [Homo sapiens]
Length = 660
Score = 31.2 bits (69), Expect = 1.8
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 51 ENAAICDEIARLEEKFLKAKEERRYLLKKLLQLQALTEGEVQAAAPSHSSSLPLTYGVAS 110
E A E R+ E + +E L K+ L + + + + AA H S+ G++
Sbjct: 524 EQAVRKSEKERMREYQRELEEREEKLKKRPLLFERVAQKNARMAAEKHYSNTLKALGISD 583
Query: 111 SVGTIQG-AGPI--------SGPSTGAEEPFGKKTKKEKKEKGKENNKLEVLKKTCKKKK 161
+ +G +G + + T +E F ++ K E++E G+EN ++ + K+K
Sbjct: 584 EFVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEKIEERENGEENYFIDTNSQDSYKEK 643
>gi|93277115 ataxin 7-like 2 [Homo sapiens]
Length = 722
Score = 31.2 bits (69), Expect = 1.8
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 96 PSHSSSLPLTYGVASSVGTIQGAGPISGP--STGAEEPFGK--KTKKEKKEKGKENNKLE 151
PS+ + P S + G+ I+ P + F K +K K KGK+ ++E
Sbjct: 507 PSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKDGVEVE 566
Query: 152 VLKKTCKKKKMAGGARKLVQPIALDPSGRPVFPIGLGGLT 191
+K+K++ G L + L+P+G+ P G GL+
Sbjct: 567 A---PSRKRKLSPGPTTLKRTCILEPTGKGK-PSGCRGLS 602
>gi|96975038 coiled-coil domain containing 100 [Homo sapiens]
Length = 986
Score = 30.8 bits (68), Expect = 2.3
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 8 ASSPRAPLQSSKARMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIARLE---E 64
+S P AP S ++ P+++ K L+ L + K + +FEN E+A ++ E
Sbjct: 630 SSLPPAPCPSE---IQTEPRETLEYKAALE-LEMWKEMQEDIFENQLKQKELAHMQALAE 685
Query: 65 KFLKAKEERRYLLKKLLQLQALTEGEVQ 92
++ K ER L+KK + + EG++Q
Sbjct: 686 EWKKRDRERESLVKKKVAEYTILEGKLQ 713
>gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]
Length = 621
Score = 30.8 bits (68), Expect = 2.3
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 27 KKSQNEKYRLKYLRLRKAAKATVFENAAICDEIARLE-EKFLKAKEERRYLLKKLLQLQA 85
++ Q ++ L L L++ ++ I + I+ LE K L+ +E+RR Q
Sbjct: 508 QQDQIDQDYLMALSLQQEQQSQEINWEQIPEGISDLELAKKLQEEEDRR-------ASQY 560
Query: 86 LTEGEVQAAAPSHSSSLPLTYGVASSVGTIQGAGPISGPSTGAEEPFGKKTKKEKKEKGK 145
E E AAA + +S+ + G A P SG +G E K+ +++ KEK K
Sbjct: 561 YQEQEQAAAAAAAAST-------QAQQGQPAQASPSSGRQSGNSERKRKEPREKDKEKEK 613
Query: 146 ENNKLEVL 153
E N +L
Sbjct: 614 EKNSCVIL 621
>gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]
Length = 620
Score = 30.8 bits (68), Expect = 2.3
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 27 KKSQNEKYRLKYLRLRKAAKATVFENAAICDEIARLE-EKFLKAKEERRYLLKKLLQLQA 85
++ Q ++ L L L++ ++ I + I+ LE K L+ +E+RR Q
Sbjct: 508 QQDQIDQDYLMALSLQQEQQSQEINWEQIPEGISDLELAKKLQEEEDRR-------ASQY 560
Query: 86 LTEGEVQAAAPSHSSSLPLTYGVASSVGTIQGAGPISGPSTGAEEPFGKKTKKEKKEKGK 145
E E AAA + +S+ + G A P SG +G E K+ +++ KEK K
Sbjct: 561 YQEQEQAAAAAAAAST--------QAQGQPAQASPSSGRQSGNSERKRKEPREKDKEKEK 612
Query: 146 ENNKLEVL 153
E N +L
Sbjct: 613 EKNSCVIL 620
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 30.4 bits (67), Expect = 3.0
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 80 LLQLQALTEGEVQAAAPSHSSSLPLTYGVASS----VGTIQGAGPISGPSTGAEEPFG-- 133
LL L L +AA + S P+ A V T +G P TG P G
Sbjct: 659 LLSLPGLKSRGSRAAGGAPSPPPPVRRASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSS 718
Query: 134 KKTKKEKKEKGKENNKLEVLKKTCKKKK 161
K+T+K++KE+ K+ + + +K +K++
Sbjct: 719 KETRKQEKERQKQEKERQKQEKEREKER 746
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 30.0 bits (66), Expect = 4.0
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 4 LDGLASSPRAPLQSSKARMKKLPKKSQNEKYRLKYLRLRKAAKATVFENAAICDEIARLE 63
+ L + + +K +K++ + +++ L+ +L + ++ EN + DEI RL
Sbjct: 1203 MSNLRNKYETEINITKTTIKEISMQKEDDSKNLRN-QLDRLSR----ENRDLKDEIVRLN 1257
Query: 64 EKFLKAKEERRYLLKKLLQLQA 85
+ L+A E+RR + LQ +A
Sbjct: 1258 DSILQATEQRRRAEENALQQKA 1279
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,313,408
Number of Sequences: 37866
Number of extensions: 873049
Number of successful extensions: 3197
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 2992
Number of HSP's gapped (non-prelim): 213
length of query: 411
length of database: 18,247,518
effective HSP length: 105
effective length of query: 306
effective length of database: 14,271,588
effective search space: 4367105928
effective search space used: 4367105928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.