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Search of human proteins with 169216229
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169216229 PREDICTED: hypothetical protein [Homo sapiens]
(163 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169216229 PREDICTED: hypothetical protein [Homo sapiens] 337 2e-93
gi|169216933 PREDICTED: hypothetical protein [Homo sapiens] 337 2e-93
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 37 0.008
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 37 0.008
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 37 0.008
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 37 0.008
gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens] 34 0.064
gi|163965366 nascent polypeptide-associated complex alpha subuni... 33 0.084
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom... 33 0.11
gi|226498192 atonal homolog 8 [Homo sapiens] 32 0.24
gi|154426272 hypothetical protein LOC54540 [Homo sapiens] 32 0.24
gi|66346685 SERPINE1 mRNA binding protein 1 isoform 4 [Homo sapi... 32 0.32
gi|66346683 SERPINE1 mRNA binding protein 1 isoform 3 [Homo sapi... 32 0.32
gi|66346681 SERPINE1 mRNA binding protein 1 isoform 2 [Homo sapi... 32 0.32
gi|66346679 SERPINE1 mRNA binding protein 1 isoform 1 [Homo sapi... 32 0.32
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 31 0.41
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 31 0.54
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 30 0.71
gi|169167808 PREDICTED: hypothetical protein [Homo sapiens] 30 0.92
gi|113417039 PREDICTED: hypothetical protein [Homo sapiens] 30 0.92
gi|113416520 PREDICTED: hypothetical protein [Homo sapiens] 30 0.92
gi|150170699 kinesin family member 26A [Homo sapiens] 30 0.92
gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting ... 30 0.92
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 30 1.2
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 30 1.2
gi|239749709 PREDICTED: hypothetical protein [Homo sapiens] 30 1.2
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 30 1.2
gi|195539337 S-adenosylhomocysteine hydrolase-like 2 isoform b [... 29 1.6
gi|24308043 S-adenosylhomocysteine hydrolase-like 2 isoform a [H... 29 1.6
>gi|169216229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 163
Score = 337 bits (865), Expect = 2e-93
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MTLQPASEVSFYKQSCCAVLAMVVSTSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGS 60
MTLQPASEVSFYKQSCCAVLAMVVSTSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGS
Sbjct: 1 MTLQPASEVSFYKQSCCAVLAMVVSTSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGS 60
Query: 61 SRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGATLALPP 120
SRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGATLALPP
Sbjct: 61 SRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGATLALPP 120
Query: 121 SCWLGAALRGCSGSLLSPPLGCDRCGFKHHTVEAEMAPRAPLK 163
SCWLGAALRGCSGSLLSPPLGCDRCGFKHHTVEAEMAPRAPLK
Sbjct: 121 SCWLGAALRGCSGSLLSPPLGCDRCGFKHHTVEAEMAPRAPLK 163
>gi|169216933 PREDICTED: hypothetical protein [Homo sapiens]
Length = 163
Score = 337 bits (865), Expect = 2e-93
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MTLQPASEVSFYKQSCCAVLAMVVSTSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGS 60
MTLQPASEVSFYKQSCCAVLAMVVSTSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGS
Sbjct: 1 MTLQPASEVSFYKQSCCAVLAMVVSTSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGS 60
Query: 61 SRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGATLALPP 120
SRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGATLALPP
Sbjct: 61 SRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGATLALPP 120
Query: 121 SCWLGAALRGCSGSLLSPPLGCDRCGFKHHTVEAEMAPRAPLK 163
SCWLGAALRGCSGSLLSPPLGCDRCGFKHHTVEAEMAPRAPLK
Sbjct: 121 SCWLGAALRGCSGSLLSPPLGCDRCGFKHHTVEAEMAPRAPLK 163
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 37.4 bits (85), Expect = 0.006
Identities = 48/163 (29%), Positives = 59/163 (36%), Gaps = 38/163 (23%)
Query: 18 AVLAMVVSTSDQLAKEGSAIRHYFSAPSHHGQGSTELP-------------GAEGSSRFP 64
+VLA V T + G R FSAPS H G+ LP G+ +R
Sbjct: 249 SVLAGCVGT--RARGHGGVQRQRFSAPSSHSTGARTLPTPSRARPGKPAPRGSAPPARLR 306
Query: 65 KAQGRSRCSQQIGMGRG-------GLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGATLA 117
G S +Q +G GRG G A A R+ S A P +RG F+P
Sbjct: 307 GGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSR-APRPVGVLRGVPHFRPLSSPAPQ 365
Query: 118 LPPSCWLGAALRGCSGSLLSPPLGCDRCGFKHHTVEAEMAPRA 160
PP R S P LG R + APRA
Sbjct: 366 SPP--------RSPSVRAFGPRLGAGR-------LSCPQAPRA 393
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 37.0 bits (84), Expect = 0.008
Identities = 37/119 (31%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 44 PSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGM-GRGGLAAR-------APRQDSNSA 95
P G+ + +PG G+ FP +G S +IG+ G GL PR D
Sbjct: 738 PGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQP 797
Query: 96 EAPSPQVRGGKDFQPPRGATLALPPSCWLGA--ALRGCSGSLLSPPL-GCDRCGFKHHT 151
P Q G+ + PRGA LP L RG +G P + G DR GF T
Sbjct: 798 GPPGEQGPPGRCIEGPRGAQ-GLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGET 855
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 37.0 bits (84), Expect = 0.008
Identities = 37/119 (31%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 44 PSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGM-GRGGLAAR-------APRQDSNSA 95
P G+ + +PG G+ FP +G S +IG+ G GL PR D
Sbjct: 738 PGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQP 797
Query: 96 EAPSPQVRGGKDFQPPRGATLALPPSCWLGA--ALRGCSGSLLSPPL-GCDRCGFKHHT 151
P Q G+ + PRGA LP L RG +G P + G DR GF T
Sbjct: 798 GPPGEQGPPGRCIEGPRGAQ-GLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGET 855
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 37.0 bits (84), Expect = 0.008
Identities = 37/119 (31%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 44 PSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGM-GRGGLAAR-------APRQDSNSA 95
P G+ + +PG G+ FP +G S +IG+ G GL PR D
Sbjct: 738 PGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQP 797
Query: 96 EAPSPQVRGGKDFQPPRGATLALPPSCWLGA--ALRGCSGSLLSPPL-GCDRCGFKHHT 151
P Q G+ + PRGA LP L RG +G P + G DR GF T
Sbjct: 798 GPPGEQGPPGRCIEGPRGAQ-GLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGET 855
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 37.0 bits (84), Expect = 0.008
Identities = 37/119 (31%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 44 PSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGM-GRGGLAAR-------APRQDSNSA 95
P G+ + +PG G+ FP +G S +IG+ G GL PR D
Sbjct: 738 PGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQP 797
Query: 96 EAPSPQVRGGKDFQPPRGATLALPPSCWLGA--ALRGCSGSLLSPPL-GCDRCGFKHHT 151
P Q G+ + PRGA LP L RG +G P + G DR GF T
Sbjct: 798 GPPGEQGPPGRCIEGPRGAQ-GLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGET 855
>gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]
Length = 2240
Score = 33.9 bits (76), Expect = 0.064
Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 79 GRGGLAARAPRQDSNSAEAPSPQVR---GGKDFQPPRGATLALPPSCWLGAALRGCSGSL 135
G GG+A RQ ++S A Q G+ P G P CW+ L
Sbjct: 33 GAGGVAGSGDRQSTSSPPARGVQTLPRLDGRPLYPQTGGRRLTPTWCWVWGLLHEGEQIT 92
Query: 136 LSPPLGCDRCGFKHHTVEAEMAP 158
S P G RC F + AP
Sbjct: 93 ASAPHGRRRCLFSAPSTHRLQAP 115
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 33.5 bits (75), Expect = 0.084
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 20/94 (21%)
Query: 49 QGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDF 108
+G P +G+ P A S +GGLA +P+ + A P +GG
Sbjct: 1206 KGGLATPSPKGAPTTPAATPPSP--------KGGLATPSPKGAPTTPAATPPSPKGGPAT 1257
Query: 109 QPPRGA---TLALPPSCWLGAALRGCSGSLLSPP 139
PP+GA A PPS G L +PP
Sbjct: 1258 PPPKGAPTPPAATPPS---------LKGGLATPP 1282
Score = 32.0 bits (71), Expect = 0.24
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 80 RGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGA---TLALPPSCWLGAALRGCSGSLL 136
+GGLA P+ + A P +GG PP+GA A PPS G A G+
Sbjct: 1137 KGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPT 1196
Query: 137 SP 138
+P
Sbjct: 1197 TP 1198
Score = 29.6 bits (65), Expect = 1.2
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 80 RGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGA---TLALPPSCWLGAALRGCSGSLL 136
+GGLA +P+ + A P +GG P+GA A PPS G A G+
Sbjct: 1183 KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT 1242
Query: 137 SP 138
+P
Sbjct: 1243 TP 1244
Score = 29.3 bits (64), Expect = 1.6
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 80 RGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGA---TLALPPS 121
+GGLA + N A P +GG PP+GA A PPS
Sbjct: 1275 KGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPS 1319
Score = 27.7 bits (60), Expect = 4.6
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 80 RGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGA---TLALPPSCWLGAALRGCSGSLL 136
+GGLA + + A P +GG PP+GA A PPS G A G+
Sbjct: 1114 KGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPT 1173
Query: 137 SP 138
+P
Sbjct: 1174 TP 1175
>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
sapiens]
Length = 1551
Score = 33.1 bits (74), Expect = 0.11
Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 13/115 (11%)
Query: 51 STELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQP 110
S + PG G + + R + + G + RAP ++ S E P G +P
Sbjct: 825 SAKDPGISGEATRHGGEPDLRPEGRRSLRMGAVFPRAPTANTASTEG-LPAKPGSHTLRP 883
Query: 111 ---PRGATLALPPSCWLGAALRGCSGSLLSPPLGCDRCGFKHHTVEAEMAPRAPL 162
P S LG +G LGCD CG+ HT A AP P+
Sbjct: 884 RSFPSPTKCLRCTSLMLGLGRQG---------LGCDACGYFCHTTCAPQAPPCPV 929
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 32.0 bits (71), Expect = 0.24
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 43 APSHHGQGSTELPGAEGSSRFPK-AQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQ 101
AP+ +G T+ G G SR P+ + R RC G + P AP Q
Sbjct: 81 APAVPPRGGTDTAGERGGSRAPEVSDARKRC-----FALGAVGPGLPTPPPPPPPAPQSQ 135
Query: 102 VRGGKDFQPPR 112
GG + QP R
Sbjct: 136 APGGPEAQPFR 146
>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
Length = 789
Score = 32.0 bits (71), Expect = 0.24
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 5 PASEVSFYKQ--SCCAVLAMVVSTSDQLAK---EGSAIRHYFSAPSHHGQGSTELPGAEG 59
P+SE K+ SC L VS+ + K +GS + ++P+ S E+P A+G
Sbjct: 574 PSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKG 633
Query: 60 SSRFPKAQGRSRCSQQIG-MGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGATLAL 118
PK GR ++G G +R R A +P + G ++ G A
Sbjct: 634 QVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKAR 693
Query: 119 P 119
P
Sbjct: 694 P 694
>gi|66346685 SERPINE1 mRNA binding protein 1 isoform 4 [Homo
sapiens]
Length = 387
Score = 31.6 bits (70), Expect = 0.32
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 25 STSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLA 84
S S++ E S + H+F P++ E+ + GR + G GRGG
Sbjct: 307 SKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGR-----PGRGGRGGRGGRGRGGRP 361
Query: 85 ARAPRQDSNSAEAP 98
R R D +SA AP
Sbjct: 362 NRGSRTDKSSASAP 375
>gi|66346683 SERPINE1 mRNA binding protein 1 isoform 3 [Homo
sapiens]
Length = 393
Score = 31.6 bits (70), Expect = 0.32
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 25 STSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLA 84
S S++ E S + H+F P++ E+ + GR + G GRGG
Sbjct: 313 SKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGR-----PGRGGRGGRGGRGRGGRP 367
Query: 85 ARAPRQDSNSAEAP 98
R R D +SA AP
Sbjct: 368 NRGSRTDKSSASAP 381
>gi|66346681 SERPINE1 mRNA binding protein 1 isoform 2 [Homo
sapiens]
Length = 402
Score = 31.6 bits (70), Expect = 0.32
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 25 STSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLA 84
S S++ E S + H+F P++ E+ + GR + G GRGG
Sbjct: 322 SKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGR-----PGRGGRGGRGGRGRGGRP 376
Query: 85 ARAPRQDSNSAEAP 98
R R D +SA AP
Sbjct: 377 NRGSRTDKSSASAP 390
>gi|66346679 SERPINE1 mRNA binding protein 1 isoform 1 [Homo
sapiens]
Length = 408
Score = 31.6 bits (70), Expect = 0.32
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 25 STSDQLAKEGSAIRHYFSAPSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLA 84
S S++ E S + H+F P++ E+ + GR + G GRGG
Sbjct: 328 SKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGR-----PGRGGRGGRGGRGRGGRP 382
Query: 85 ARAPRQDSNSAEAP 98
R R D +SA AP
Sbjct: 383 NRGSRTDKSSASAP 396
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 31.2 bits (69), Expect = 0.41
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Query: 48 GQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKD 107
G+G+ PG G++ P QG RGGL + P+ D P GKD
Sbjct: 706 GKGAAGPPGPPGAAGTPGLQGMPG-------ERGGLGSPGPKGDKGEPGGPGADGVPGKD 758
Query: 108 FQPPRGATLALPP 120
PRG T + P
Sbjct: 759 --GPRGPTGPIGP 769
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 30.8 bits (68), Expect = 0.54
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 51 STELPGAEGSSRFPKAQGRSRCS-QQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQ 109
S++ PG E +R P G++ S G G GG R + PSP+ R +
Sbjct: 1386 SSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEE 1445
Query: 110 PPRGATLALPP 120
P G L PP
Sbjct: 1446 RPPGLPLPPPP 1456
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 30.4 bits (67), Expect = 0.71
Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Query: 44 PSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEA----PS 99
P+H G PG P A G + ++ +G L R P S + PS
Sbjct: 1028 PAHSGALPFPSPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPS 1087
Query: 100 PQVRGGKDFQPPRGATLALPPSCWLGAA 127
P G PPR PP GAA
Sbjct: 1088 PAPSPGPGPVPPRPPAAEPPPCLRRGAA 1115
>gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 30.0 bits (66), Expect = 0.92
Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)
Query: 44 PSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVR 103
P+ HG +E P R + QG SR G GG PR +++ A S R
Sbjct: 10 PAQHGARPSEKP-----PRAAQRQGASRA------GTGGSGVLTPRAKGSTSRAESSAAR 58
Query: 104 G--------------GKDFQPPRGATLALPPSCWLGAALRGCSGSLLSPPLGCDRCG 146
G G+ ++ G +L P G R G S P C R G
Sbjct: 59 GARVRAPGRTCRGGPGRGYESAAGNSLPSVP----GGGGRDPGGGAASQPGLCGRAG 111
>gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 30.0 bits (66), Expect = 0.92
Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)
Query: 44 PSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVR 103
P+ HG +E P R + QG SR G GG PR +++ A S R
Sbjct: 10 PAQHGARPSEKP-----PRAAQRQGASRA------GTGGSGVLTPRAKGSTSRAESSAAR 58
Query: 104 G--------------GKDFQPPRGATLALPPSCWLGAALRGCSGSLLSPPLGCDRCG 146
G G+ ++ G +L P G R G S P C R G
Sbjct: 59 GARVRAPGRTCRGGPGRGYESAAGNSLPSVP----GGGGRDPGGGAASQPGLCGRAG 111
>gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 30.0 bits (66), Expect = 0.92
Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)
Query: 44 PSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVR 103
P+ HG +E P R + QG SR G GG PR +++ A S R
Sbjct: 10 PAQHGARPSEKP-----PRAAQRQGASRA------GTGGSGVLTPRAKGSTSRAESSAAR 58
Query: 104 G--------------GKDFQPPRGATLALPPSCWLGAALRGCSGSLLSPPLGCDRCG 146
G G+ ++ G +L P G R G S P C R G
Sbjct: 59 GARVRAPGRTCRGGPGRGYESAAGNSLPSVP----GGGGRDPGGGAASQPGLCGRAG 111
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 30.0 bits (66), Expect = 0.92
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 59 GSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGKDFQPPRGAT--- 115
GS R P+AQ C+Q++ G +AARA R+ A P + RGAT
Sbjct: 1266 GSPRLPEAQVMLACAQRVVDG-CEVAARAARRPEAVARIPPLR----------RGATTLG 1314
Query: 116 LALPPSCWLGAALR--GCSGSLLSPP 139
+ P W A CSGSL + P
Sbjct: 1315 VTTPAVSWGDAPTEVVACSGSLKASP 1340
>gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting
protein [Homo sapiens]
Length = 1209
Score = 30.0 bits (66), Expect = 0.92
Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 36 AIRHYFSAPS---HHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDS 92
AI+ Y A S G G + PGA SR A G SRC + G A P+
Sbjct: 136 AIQEYLKAKSGAAQPGAGGAQ-PGAAQPSR--AAGGGSRCKPEPAHGSAPTALCPPKLVP 192
Query: 93 NSAEAPSPQVRGGKD 107
S P QV KD
Sbjct: 193 GSGGGPGSQVGSSKD 207
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 29.6 bits (65), Expect = 1.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 42 SAPSHHGQGSTELPGAEGSSRFPKA-QGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSP 100
+AP HG+G+ + A G A G R +Q +G G A A + + A A
Sbjct: 143 AAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEH 202
Query: 101 QVRGGKDFQP 110
GG+ P
Sbjct: 203 PAVGGRGHGP 212
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 29.6 bits (65), Expect = 1.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 42 SAPSHHGQGSTELPGAEGSSRFPKA-QGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSP 100
+AP HG+G+ + A G A G R +Q +G G A A + + A A
Sbjct: 292 AAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEH 351
Query: 101 QVRGGKDFQP 110
GG+ P
Sbjct: 352 PAVGGRGHGP 361
>gi|239749709 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 29.6 bits (65), Expect = 1.2
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 42 SAPSHHGQGSTELPGAEGSSRFPKAQGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQ 101
SAP G+ G GS P+ +GR +G+G G R+ R + AEA + +
Sbjct: 6 SAPGGRGRS-----GLGGSGGAPRVRGRGTA---VGVGIGVRVWRSRRAEGGGAEAAAAR 57
Query: 102 VRGGK 106
GG+
Sbjct: 58 TAGGE 62
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 29.6 bits (65), Expect = 1.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 42 SAPSHHGQGSTELPGAEGSSRFPKA-QGRSRCSQQIGMGRGGLAARAPRQDSNSAEAPSP 100
+AP HG+G+ + A G A G R +Q +G G A A + + A A
Sbjct: 292 AAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEH 351
Query: 101 QVRGGKDFQP 110
GG+ P
Sbjct: 352 PAVGGRGHGP 361
>gi|195539337 S-adenosylhomocysteine hydrolase-like 2 isoform b
[Homo sapiens]
Length = 610
Score = 29.3 bits (64), Expect = 1.6
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 51 STELPGAEGSSRFPKAQGR----SRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGK 106
S ++ A +++ P+ + + S Q+G+ + A AP EAP+P
Sbjct: 2 SVQVVSAAAAAKVPEVELKDLSPSEAESQLGLSTAAVGAMAPPAGGGDPEAPAPAAERPP 61
Query: 107 DFQPPRGATLALPPS 121
P G AL P+
Sbjct: 62 VPGPGSGPAAALSPA 76
>gi|24308043 S-adenosylhomocysteine hydrolase-like 2 isoform a [Homo
sapiens]
Length = 611
Score = 29.3 bits (64), Expect = 1.6
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 51 STELPGAEGSSRFPKAQGR----SRCSQQIGMGRGGLAARAPRQDSNSAEAPSPQVRGGK 106
S ++ A +++ P+ + + S Q+G+ + A AP EAP+P
Sbjct: 2 SVQVVSAAAAAKVPEVELKDLSPSEAESQLGLSTAAVGAMAPPAGGGDPEAPAPAAERPP 61
Query: 107 DFQPPRGATLALPPS 121
P G AL P+
Sbjct: 62 VPGPGSGPAAALSPA 76
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,504,306
Number of Sequences: 37866
Number of extensions: 390444
Number of successful extensions: 1865
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 1755
Number of HSP's gapped (non-prelim): 207
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.