Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169214604
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169214604 PREDICTED: hypothetical protein [Homo sapiens]
(583 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169214604 PREDICTED: hypothetical protein [Homo sapiens] 1164 0.0
gi|169214874 PREDICTED: hypothetical protein [Homo sapiens] 1151 0.0
gi|169215109 PREDICTED: hypothetical protein [Homo sapiens] 1151 0.0
gi|239757495 PREDICTED: hypothetical protein [Homo sapiens] 55 2e-07
gi|239752012 PREDICTED: hypothetical protein XP_002348067 [Homo ... 55 2e-07
gi|239746497 PREDICTED: hypothetical protein XP_002343747 [Homo ... 55 2e-07
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 43 0.001
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 41 0.003
gi|239754209 PREDICTED: hypothetical protein [Homo sapiens] 39 0.017
gi|239748740 PREDICTED: hypothetical protein [Homo sapiens] 39 0.017
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 37 0.065
gi|207452735 epiplakin 1 [Homo sapiens] 36 0.086
gi|60097902 filaggrin [Homo sapiens] 36 0.11
gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b ... 35 0.19
gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a ... 35 0.19
gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo sapi... 35 0.19
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap... 35 0.19
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 35 0.19
gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo sapi... 35 0.19
gi|62122917 filaggrin family member 2 [Homo sapiens] 35 0.25
gi|110611218 ribosome binding protein 1 [Homo sapiens] 35 0.25
gi|110611220 ribosome binding protein 1 [Homo sapiens] 35 0.25
gi|40255149 Rho guanine nucleotide exchange factor (GEF) 19 [Hom... 35 0.25
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 34 0.32
gi|91208420 bassoon protein [Homo sapiens] 34 0.42
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 34 0.42
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 33 0.55
gi|24308115 interferon regulatory factor 2 binding protein 1 [Ho... 33 0.55
gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo sap... 33 0.55
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 33 0.72
>gi|169214604 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 1164 bits (3010), Expect = 0.0
Identities = 583/583 (100%), Positives = 583/583 (100%)
Query: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL
Sbjct: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
Query: 61 ELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
ELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD
Sbjct: 61 ELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
Query: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ
Sbjct: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
Query: 181 DAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
DAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG
Sbjct: 181 DAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
Query: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQKLCPVPCW 300
RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQKLCPVPCW
Sbjct: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQKLCPVPCW 300
Query: 301 ASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
ASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH
Sbjct: 301 ASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
Query: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA
Sbjct: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
Query: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV
Sbjct: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
Query: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR
Sbjct: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
Query: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR
Sbjct: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
>gi|169214874 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 1151 bits (2977), Expect = 0.0
Identities = 579/583 (99%), Positives = 579/583 (99%)
Query: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL
Sbjct: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
Query: 61 ELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
ELQVGAGEGVEDGGDWEGHEQDAAQ AAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD
Sbjct: 61 ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
Query: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ
Sbjct: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
Query: 181 DAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
DAQRPQHAQHQPHLVQVAVARAGLATA GGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG
Sbjct: 181 DAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
Query: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQKLCPVPCW 300
RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKG QKLCPVPCW
Sbjct: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCW 300
Query: 301 ASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
ASQAEGPQAATW PYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH
Sbjct: 301 ASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
Query: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA
Sbjct: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
Query: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV
Sbjct: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
Query: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR
Sbjct: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
Query: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR
Sbjct: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
>gi|169215109 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 1151 bits (2977), Expect = 0.0
Identities = 579/583 (99%), Positives = 579/583 (99%)
Query: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL
Sbjct: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
Query: 61 ELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
ELQVGAGEGVEDGGDWEGHEQDAAQ AAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD
Sbjct: 61 ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
Query: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ
Sbjct: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
Query: 181 DAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
DAQRPQHAQHQPHLVQVAVARAGLATA GGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG
Sbjct: 181 DAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
Query: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQKLCPVPCW 300
RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKG QKLCPVPCW
Sbjct: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCW 300
Query: 301 ASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
ASQAEGPQAATW PYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH
Sbjct: 301 ASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
Query: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA
Sbjct: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
Query: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV
Sbjct: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
Query: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR
Sbjct: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
Query: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR
Sbjct: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
>gi|239757495 PREDICTED: hypothetical protein [Homo sapiens]
Length = 111
Score = 54.7 bits (130), Expect = 2e-07
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 172 VARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQR 231
+ARQ + +DA A+H HL QVA A L C + QQR++ GQ H VD+ +R
Sbjct: 1 MARQLEYAEDAHE---AEHLHHLAQVAELLAALVAQCHTS--QQREIEGQHRHNVDEVER 55
Query: 232 APQEGELAGRLNEPQEELQGEPAHAHRL 259
+E GR E + L+ EP A L
Sbjct: 56 VAEEVARTGRQQEARRHLEAEPGDAEVL 83
>gi|239752012 PREDICTED: hypothetical protein XP_002348067 [Homo
sapiens]
Length = 111
Score = 54.7 bits (130), Expect = 2e-07
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 172 VARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQR 231
+ARQ + +DA A+H HL QVA A L C + QQR++ GQ H VD+ +R
Sbjct: 1 MARQLEYAEDAHE---AEHLHHLAQVAELLAALVAQCHTS--QQREIEGQHRHNVDEVER 55
Query: 232 APQEGELAGRLNEPQEELQGEPAHAHRL 259
+E GR E + L+ EP A L
Sbjct: 56 VAEEVARTGRQQEARRHLEAEPGDAEVL 83
>gi|239746497 PREDICTED: hypothetical protein XP_002343747 [Homo
sapiens]
Length = 111
Score = 54.7 bits (130), Expect = 2e-07
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 172 VARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQR 231
+ARQ + +DA A+H HL QVA A L C + QQR++ GQ H VD+ +R
Sbjct: 1 MARQLEYAEDAHE---AEHLHHLAQVAELLAALVAQCHTS--QQREIEGQHRHNVDEVER 55
Query: 232 APQEGELAGRLNEPQEELQGEPAHAHRL 259
+E GR E + L+ EP A L
Sbjct: 56 VAEEVARTGRQQEARRHLEAEPGDAEVL 83
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 42.7 bits (99), Expect = 0.001
Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 15/186 (8%)
Query: 65 GAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHG---DDSPPVAGRDA 121
G GEG E+ G+WEG E++ + + G G+ G ++ G +
Sbjct: 944 GEGEGEEEEGEWEGEEEE-GEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEE 1002
Query: 122 GELGAVGHLVLDDVEQGR-------EEGDGHAEEEQQE---PELAGAAAGREPQRLQPQG 171
GE G ++ E+G EEG+G EEE+ E E G E +R + +
Sbjct: 1003 GEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEE 1062
Query: 172 VARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQR 231
+ + + + Q +V+ + G +Q++ V G+ +QR +
Sbjct: 1063 EEEEGKYQETGEEENERQDGEEYKKVSKIK-GSVKYGKHKTYQKKSVTNTQGNGKEQRSK 1121
Query: 232 APQEGE 237
P + +
Sbjct: 1122 MPVQSK 1127
Score = 37.4 bits (85), Expect = 0.038
Identities = 49/230 (21%), Positives = 82/230 (35%), Gaps = 19/230 (8%)
Query: 67 GEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGA 126
GEG E+ G+ E E + ++ +G G G+ G+ G GE
Sbjct: 833 GEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEE-EGEGEGEEEG 891
Query: 127 VGHLVLDDVE-QGREEGDGHAEEEQQE--PELAGAAAGREPQRLQPQGVARQAHHVQDAQ 183
G ++ E +G EEG+G EEE+ E E G E + + +G + +
Sbjct: 892 EGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEE 951
Query: 184 RPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGRLN 243
+ G G ++ + G++G + + EGE
Sbjct: 952 EGEW--------------EGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEE 997
Query: 244 EPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQK 293
E +EE +GE +E+ G V GE G G +G ++
Sbjct: 998 EGEEEGEGEEEGEGEGEEEEEGEVEGEVE-GEEGEGEGEEEEGEEEGEER 1046
Score = 36.6 bits (83), Expect = 0.065
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 61 ELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
E + G GEG E+ G+ EG + + + +G + G+ + G
Sbjct: 924 EGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGE--GEGEEEGEGEGEEGEGEG 981
Query: 121 AGELGAVGHLVLDDVEQGREEGDGHAE-----EEQQEPELAGAAAGRE 163
E G + E+G EEG+G E EE++E E+ G G E
Sbjct: 982 EEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEE 1029
Score = 33.5 bits (75), Expect = 0.55
Identities = 48/231 (20%), Positives = 84/231 (36%), Gaps = 26/231 (11%)
Query: 65 GAGEGVEDGGDWEGHE-QDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVA-GRDAG 122
G GE E+GG+ EG E ++ + + G + G++ G + G
Sbjct: 803 GRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEG 862
Query: 123 ELGAVGHLVLDDVEQGRE-EGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQD 181
E G + E+G E EG+G EE + E E G G E + + +G ++
Sbjct: 863 EEG-------EGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEG-EGEGEEEGEGEGEE 914
Query: 182 AQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGR 241
+ + + + G ++ + G+DG + + EGE
Sbjct: 915 EEGEGKGEEEGEEGE------------GEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEG 962
Query: 242 LNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQ 292
E +EE +GE +E+ G E G + G G + G+
Sbjct: 963 EGEGEEEGEGEGEEGEGEGEEEEGEGEGE---EEEGEEEGEEEGEGEEEGE 1010
Score = 31.6 bits (70), Expect = 2.1
Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 14/206 (6%)
Query: 61 ELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
E + G GEG E+ G+ EG E+ +G G+ ++ G +
Sbjct: 870 EGEEGEGEGEEEEGEGEGEEE------GEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEE 923
Query: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQE---PELAGAAAGREPQRLQPQGVARQAH 177
GE G G ++ E E+G+G EEE+ E E G G E + +G +
Sbjct: 924 EGEEGE-GEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEG--EGEGEEGEGE 980
Query: 178 HVQDAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGE 237
++ + + + G ++ +V G+ + + + +EGE
Sbjct: 981 GEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGE 1040
Query: 238 LAGRLNEPQEELQGEPAHAHRLHDED 263
G E ++E +GE +R +E+
Sbjct: 1041 EEG--EEREKEGEGEENRRNREEEEE 1064
Score = 30.0 bits (66), Expect = 6.1
Identities = 51/240 (21%), Positives = 86/240 (35%), Gaps = 35/240 (14%)
Query: 24 RGGTSEQDVTVLGHAQLRLGFDEELRPPEH-HPLLLLLELQVGA----GEGVEDGGDWEG 78
R G E+++ + R G ++E + E H E++ G GEG E+ GD E
Sbjct: 688 RPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREE 747
Query: 79 HEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQG 138
E+ + +G G+ V R ++ AG+ E+G
Sbjct: 748 EEEKEGEGKEEGE-------GEEVE--GEREKEEGERKKEERAGK-----------EEKG 787
Query: 139 REEGD-GHAEEEQ-----QEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQP 192
EEGD G EEE+ +E E G G E + +G + ++ + +
Sbjct: 788 EEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVE----EGKGEREEEEEEGEGEEEEGEGE 843
Query: 193 HLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGRLNEPQEELQGE 252
G + + G++G + + EGE G +EE +GE
Sbjct: 844 EEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGE 903
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 41.2 bits (95), Expect = 0.003
Identities = 77/349 (22%), Positives = 123/349 (35%), Gaps = 54/349 (15%)
Query: 67 GEGV----EDGGDWEGHEQDAAQDAAQGHYLARG-APGDHVAIAHRRHGDDSP------- 114
GEG+ E GG GHE + +AA G G + G A G+ P
Sbjct: 1794 GEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEA 1853
Query: 115 PVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQE---------PELAGAAAGREPQ 165
P A DA E +DVE EG+ E E E PE GA A +
Sbjct: 1854 PEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEK 1913
Query: 166 RLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQ 225
QP+ + +A + P+ + + A A G + +V+ + +
Sbjct: 1914 EAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEA------EGQTQPESEVI--ESQE 1965
Query: 226 VDQRQRAPQEGELAGRLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDA----G 281
++ + E A + +E +GE + EDV A + E +A
Sbjct: 1966 AEEEAQPESEDVEALEVEVETQEAEGEA----QPESEDVEAPEAEGEMQEAEEEAQPESD 2021
Query: 282 GVSGPSRKGGQKLCPVPCWASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLKYLAGQGA 341
GV + G++ V + EG D G+ + Q A
Sbjct: 2022 GVEAQPKSEGEEAQEVEGETQKTEG--------------DAQPESDGVEAPEAEEEAQEA 2067
Query: 342 DGEVDGGDGHEEHRQAGEHLARQP--RVRPLHHVAQSPHAAPQAALALG 388
+GEV +G E H ++ + A++ +P ++P A +A A G
Sbjct: 2068 EGEVQEAEG-EAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEG 2115
Score = 37.7 bits (86), Expect = 0.029
Identities = 53/238 (22%), Positives = 86/238 (36%), Gaps = 22/238 (9%)
Query: 71 EDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELG----- 125
ED + EG E A++AAQ A G + + ++ D L
Sbjct: 1930 EDEPESEGAEAQEAEEAAQE---AEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVET 1986
Query: 126 --AVGHLV--LDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ- 180
A G +DVE EG+ EE+ +PE G A + + + Q V + +
Sbjct: 1987 QEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEG 2046
Query: 181 DAQRPQHAQHQPHLVQVAVARAGLATACGGAVH-QQRDVVGQDGHQVDQRQ----RAPQ- 234
DAQ P + A G G H + DV Q+ Q + AP+
Sbjct: 2047 DAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEA 2106
Query: 235 --EGELAGRLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKG 290
E + A + P+ E + +P + + + + G +DA G + P +G
Sbjct: 2107 EGEAQKAEGIEAPETEGEAQP-ESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEG 2163
Score = 37.0 bits (84), Expect = 0.050
Identities = 41/191 (21%), Positives = 66/191 (34%), Gaps = 7/191 (3%)
Query: 64 VGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGE 123
V A E D + EG Q ++D P + P G +A E
Sbjct: 1851 VEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPE 1910
Query: 124 LGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQ 183
+ VE EG+ E E E + A AA + QP+ ++ ++
Sbjct: 1911 AEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEA 1970
Query: 184 RPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGRLN 243
+P+ + V+V A G A + DV + + Q A +E +
Sbjct: 1971 QPESEDVEALEVEVETQEAE-----GEAQPESEDVEAPEAE--GEMQEAEEEAQPESDGV 2023
Query: 244 EPQEELQGEPA 254
E Q + +GE A
Sbjct: 2024 EAQPKSEGEEA 2034
Score = 32.0 bits (71), Expect = 1.6
Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 10/128 (7%)
Query: 68 EGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAV 127
EG+E + EG Q ++ P A G+ P G +A E
Sbjct: 2114 EGIE-APETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEE 2172
Query: 128 GHLVLDDVEQGREEGDGHAEEE---------QQEPELAGAAAGREPQRLQPQGVARQAHH 178
L+ VE EG+ E E + +PEL G A + QP+ +
Sbjct: 2173 AQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPE 2232
Query: 179 VQDAQRPQ 186
+ +P+
Sbjct: 2233 AEGEAQPE 2240
Score = 31.6 bits (70), Expect = 2.1
Identities = 31/136 (22%), Positives = 47/136 (34%), Gaps = 5/136 (3%)
Query: 52 EHHPLLLLLELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGD 111
E HP ++ Q GE + E E + A+G AP G
Sbjct: 2077 EAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIE----APETEGEAQPESEGI 2132
Query: 112 DSPPVAGRDAGELGAVGHLVLDDVEQGREEG-DGHAEEEQQEPELAGAAAGREPQRLQPQ 170
++P G E V + Q EG + EE+ +PEL G A QP+
Sbjct: 2133 EAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPE 2192
Query: 171 GVARQAHHVQDAQRPQ 186
+A + +P+
Sbjct: 2193 SEGIEAPEAEGEAQPE 2208
>gi|239754209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 38.5 bits (88), Expect = 0.017
Identities = 59/198 (29%), Positives = 71/198 (35%), Gaps = 32/198 (16%)
Query: 35 LGHAQLRLGFDEELRPPEHHPLLLLLELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLA 94
L HA R+ E L P LL Q+ G V D G H Q A +D A G
Sbjct: 50 LVHALARVPVQEGLAPEHGRELLGDALEQLLDGRAVADEGG--RHLQAAGRDVAHGRLHV 107
Query: 95 RGAPGDHVA----------IAHRRHGDDSPPVAG-RDAGELGAV--GHLVLDDVEQGREE 141
G P VA + H HG +P R + V GH VL E
Sbjct: 108 VGDPLHEVAAVLVLHVEHLLVHLLHGHAAPEDGSHRQVAAVARVAGGHHVLGVEHLLGEL 167
Query: 142 GDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVAVAR 201
G ++ P L A AG+ + + AR+ HHV H Q L QV V
Sbjct: 168 G------HRERPVLLAAPAGQGREAGHEEVQAREGHHV-------HRQ----LAQVCVQL 210
Query: 202 AGLATACGGAVHQQRDVV 219
A A A G H R V
Sbjct: 211 AREAQAGGDPAHGGRHQV 228
>gi|239748740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 38.5 bits (88), Expect = 0.017
Identities = 59/198 (29%), Positives = 71/198 (35%), Gaps = 32/198 (16%)
Query: 35 LGHAQLRLGFDEELRPPEHHPLLLLLELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLA 94
L HA R+ E L P LL Q+ G V D G H Q A +D A G
Sbjct: 50 LVHALARVPVQEGLAPEHGRELLGDALEQLLDGRAVADEGG--RHLQAAGRDVAHGRLHV 107
Query: 95 RGAPGDHVA----------IAHRRHGDDSPPVAG-RDAGELGAV--GHLVLDDVEQGREE 141
G P VA + H HG +P R + V GH VL E
Sbjct: 108 VGDPLHEVAAVLVLHVEHLLVHLLHGHAAPEDGSHRQVAAVARVAGGHHVLGVEHLLGEL 167
Query: 142 GDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVAVAR 201
G ++ P L A AG+ + + AR+ HHV H Q L QV V
Sbjct: 168 G------HRERPVLLAAPAGQGREAGHEEVQAREGHHV-------HRQ----LAQVCVQL 210
Query: 202 AGLATACGGAVHQQRDVV 219
A A A G H R V
Sbjct: 211 AREAQAGGDPAHGGRHQV 228
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 36.6 bits (83), Expect = 0.065
Identities = 43/138 (31%), Positives = 57/138 (41%), Gaps = 23/138 (16%)
Query: 144 GHAEEEQQEPELAGAAAG------REPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQV 197
G + + + P G AAG R+P+R P+ AQ +H P + V
Sbjct: 629 GASRAQARLPHSGGPAAGGGRQLKRDPER--PESAKAFGREGSGAQGEAEVRHPPVGIAV 686
Query: 198 AVARAGLATACG----GAVHQQR-----DVVGQ---DGHQVDQRQRAPQEGELAGRLNEP 245
AVAR + G G V Q+R +V G D VD R R +E L RL+
Sbjct: 687 AVARQKDSGGSGRLGPGLVDQERSLSLSNVKGHGRADEDCVDDRARHREERLLGARLDRD 746
Query: 246 QEEL---QGEPAHAHRLH 260
QE+L E A RLH
Sbjct: 747 QEKLLRESKELADLARLH 764
>gi|207452735 epiplakin 1 [Homo sapiens]
Length = 5090
Score = 36.2 bits (82), Expect = 0.086
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + R G P AGR G+ GR + +G E E QE
Sbjct: 2578 AEEAPGARPQLQDARRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 2624
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 2625 AAAAAAARRQEQTLR 2639
Score = 33.1 bits (74), Expect = 0.72
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + G P AGR G+ GR + +G E E QE
Sbjct: 3112 AEEAPGARPQLQDAWRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 3158
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 3159 AAAAAAARRQEQTLR 3173
Score = 33.1 bits (74), Expect = 0.72
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + G P AGR G+ GR + +G E E QE
Sbjct: 3646 AEEAPGARPQLQDAWRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 3692
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 3693 AAAAAAARRQEQTLR 3707
Score = 33.1 bits (74), Expect = 0.72
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + G P AGR G+ GR + +G E E QE
Sbjct: 4714 AEEAPGARPQLQDAWRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 4760
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 4761 AAAAAAARRQEQTLR 4775
Score = 32.3 bits (72), Expect = 1.2
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + G P AGR G+ GR + +G E E QE
Sbjct: 4180 AEEAPGARPQLQDAWRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 4226
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 4227 AAATAAARRQEQTLR 4241
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 35.8 bits (81), Expect = 0.11
Identities = 70/342 (20%), Positives = 110/342 (32%), Gaps = 56/342 (16%)
Query: 80 EQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDS---------PPVAGRDAGELGAVGHL 130
E + AA H AR +PG+ H++ D S A RD+G G+ G
Sbjct: 1011 ETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSGIPRRQASSAVRDSGHWGSSGSQ 1070
Query: 131 VLDDVEQGREEGD-----GHAEE-------EQQEPELAGAAAGREPQRLQPQGVARQA-- 176
D E EE D GH ++ ++ + +G +GR + Q+
Sbjct: 1071 ASDS-EGHSEESDTQSVSGHGQDGPHQQSHQESARDWSGGRSGRSGSFIYQVSTHEQSES 1129
Query: 177 ---------------HHVQDAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQ 221
HH Q +H+ Q + G+ H+Q V +
Sbjct: 1130 AHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRAHPGSRRGGRQGSHHEQS--VDR 1187
Query: 222 DGHQVDQRQRAPQEGELAGRLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAG 281
GH +G Q A R +D + G+ G R +A
Sbjct: 1188 SGHSGSHHSHTTSQGR------SDASHGQSGSRSASRQTRKDKQSGDGSRHSGSRHHEAA 1241
Query: 282 GVSGPSRKG--GQKLCPVPCWASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLKYLAGQ 339
+ SR GQ+ S+ Q ++ + + + D + GS + G
Sbjct: 1242 SWADSSRHSQVGQEQSS----GSRTSRHQGSSVSQDSDSERHSDDSERLSGSASRNHHGS 1297
Query: 340 GADGEVDGGDG---HEEHRQAGEHLARQPRVRPLHHVAQSPH 378
+ DG H+E R + H A R HH S H
Sbjct: 1298 SREQSRDGSRHPGFHQEDRASHGHSADSSRQSGTHHTESSSH 1339
Score = 35.8 bits (81), Expect = 0.11
Identities = 45/222 (20%), Positives = 79/222 (35%), Gaps = 38/222 (17%)
Query: 66 AGEGVEDGGDW----------EGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPP 115
A V D G W EGH +++ + GH G G H + H + +
Sbjct: 1054 ASSAVRDSGHWGSSGSQASDSEGHSEESDTQSVSGH----GQDGPH----QQSHQESARD 1105
Query: 116 VAGRDAGELGAVGHLVLDDVEQ-----------GREEGDGHAEEEQQEPELAGAAAGREP 164
+G +G G+ + V + GR +G H E+ + + + G++
Sbjct: 1106 WSGGRSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQG-SHHEQARDSSRHSASQEGQDT 1164
Query: 165 QRLQP---QGVARQAHHVQDAQRPQHA-QHQPHLVQVAVARA--GLATACGGAVHQQRDV 218
R P +G + +HH Q R H+ H H + A G + + + ++D
Sbjct: 1165 IRAHPGSRRGGRQGSHHEQSVDRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRKDK 1224
Query: 219 VGQDG--HQVDQRQRAPQEGELAGRLNEPQEELQGEPAHAHR 258
DG H + A + + QE+ G H+
Sbjct: 1225 QSGDGSRHSGSRHHEAASWADSSRHSQVGQEQSSGSRTSRHQ 1266
Score = 35.4 bits (80), Expect = 0.15
Identities = 61/257 (23%), Positives = 86/257 (33%), Gaps = 52/257 (20%)
Query: 67 GEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD-AGELG 125
G V D EGH +D+ + + RG+ A RHG P D AG
Sbjct: 943 GSSVSQDSDSEGHSEDSERWSGSASRNHRGS-----AQEQSRHGSRHPRSHHEDRAGH-- 995
Query: 126 AVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRP 185
GH + R+ G HAE G AA Q G + H Q A
Sbjct: 996 --GH----SADSSRQSGTPHAETSS-----GGQAASSHEQARSSPGERHGSRHQQSADSS 1044
Query: 186 QHAQHQPHLVQVAVARAGLATACGGAV-----HQQRDVV------GQDG-HQVDQRQRAP 233
+H+ AV +G + G H + GQDG HQ ++ A
Sbjct: 1045 RHSGIPRRQASSAVRDSGHWGSSGSQASDSEGHSEESDTQSVSGHGQDGPHQQSHQESAR 1104
Query: 234 Q-EGELAGR----LNEPQEELQGEPAH------------AHRLHDEDVVAHLGTVALGER 276
G +GR + + Q E AH +H D H + +
Sbjct: 1105 DWSGGRSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRH----SASQE 1160
Query: 277 GRDAGGVSGPSRKGGQK 293
G+D SR+GG++
Sbjct: 1161 GQDTIRAHPGSRRGGRQ 1177
Score = 33.5 bits (75), Expect = 0.55
Identities = 61/257 (23%), Positives = 86/257 (33%), Gaps = 53/257 (20%)
Query: 67 GEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD-AGELG 125
G V D EGH +D+ + + RG+ + RHG P D AG
Sbjct: 3212 GSSVSQDSDSEGHSEDSERWSGSASRNHRGSVQE-----QSRHGSRHPRSHHEDRAGH-- 3264
Query: 126 AVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRP 185
GH ++ R+ G HAE G AA Q G + H Q A
Sbjct: 3265 --GH----SADRSRQSGTRHAETSS-----GGQAASSHEQARSSPGERHGSRHQQSADSS 3313
Query: 186 QHAQHQPHLVQVAV------ARAGLATACGGAVHQQRDVVGQDGH-QVDQRQRAPQE--- 235
+H+ AV +G + ++ D GH Q Q++ QE
Sbjct: 3314 RHSGIPRGQASSAVRDSRHWGSSGSQASDSEGHSEESDTQSVSGHGQAGPHQQSHQESAR 3373
Query: 236 ---GELAGR----LNEPQEELQGEPAH------------AHRLHDEDVVAHLGTVALGER 276
G +GR L + Q E AH +H D H + +
Sbjct: 3374 DRSGGRSGRSGSFLYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRH----SASQE 3429
Query: 277 GRDA-GGVSGPSRKGGQ 292
G+D G G SR+G Q
Sbjct: 3430 GQDTIRGHPGSSRRGRQ 3446
Score = 32.3 bits (72), Expect = 1.2
Identities = 32/137 (23%), Positives = 47/137 (34%), Gaps = 14/137 (10%)
Query: 67 GEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGA 126
G D EGH +++ + GH A H R G+ S GR L
Sbjct: 416 GSSGSQASDSEGHSENSDTQSVSGHGKAGLRQQSHQESTRGRSGERS----GRSGSSLYQ 471
Query: 127 VGHLVLDDVEQGRE------EGDGHAEEEQQEPELAGAAAGREPQRLQP---QGVARQAH 177
V D GR H E+ + + + G++ R P +G + +H
Sbjct: 472 VSTHEQPDSAHGRTGTSTGGRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSH 531
Query: 178 HVQDAQRPQHA-QHQPH 193
H Q R H+ H H
Sbjct: 532 HEQSVNRSGHSGSHHSH 548
>gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b
[Homo sapiens]
Length = 806
Score = 35.0 bits (79), Expect = 0.19
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 68 EGVE--DGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELG 125
EG+ DG E E++ A AA G + A + +GDD G D ELG
Sbjct: 94 EGISALDGDQMELGEENGAAGAADS-----GPMEEEEAASEDENGDDQGFQEGED--ELG 146
Query: 126 AVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQA 176
D E+G + +GH E++ Q P A ++ Q Q +G A++A
Sbjct: 147 --------DEEEGAGDENGHGEQQPQPP------ATQQQQPQQQRGAAKEA 183
>gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a
[Homo sapiens]
Length = 825
Score = 35.0 bits (79), Expect = 0.19
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 68 EGVE--DGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELG 125
EG+ DG E E++ A AA G + A + +GDD G D ELG
Sbjct: 94 EGISALDGDQMELGEENGAAGAADS-----GPMEEEEAASEDENGDDQGFQEGED--ELG 146
Query: 126 AVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQA 176
D E+G + +GH E++ Q P A ++ Q Q +G A++A
Sbjct: 147 --------DEEEGAGDENGHGEQQPQPP------ATQQQQPQQQRGAAKEA 183
>gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo
sapiens]
Length = 283
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 66 AGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGD 111
AG+GV GGD++GH + H + GAP A +HGD
Sbjct: 178 AGDGVAAGGDYKGHSKFLVTAQNPAHEPSPGAPAPQELGAAHKHGD 223
>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
sapiens]
Length = 430
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 66 AGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGD 111
AG+GV GGD++GH + H + GAP A +HGD
Sbjct: 325 AGDGVAAGGDYKGHSKFLVTAQNPAHEPSPGAPAPQELGAAHKHGD 370
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 35.0 bits (79), Expect = 0.19
Identities = 79/341 (23%), Positives = 119/341 (34%), Gaps = 66/341 (19%)
Query: 67 GEGVEDGGDWEGHE-QDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELG 125
GE GG+ EG E + A++A +G + A G G D P A G G
Sbjct: 29 GEPGAAGGEAEGPEGSEGAEEAPRGAAAVKEAGGG---------GPDRGPEA-EARGTRG 78
Query: 126 AVGHLVLDD-------VEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVA-RQAH 177
A G ++ V QG EE G + E GA+ GR Q +P+G A R+
Sbjct: 79 AHGETEAEEGAPEGAEVPQGGEETSGAQQVE-------GASPGRGAQG-EPRGEAQREPE 130
Query: 178 HVQDAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGE 237
+R + A+ +P + + + G D G G ++ A E
Sbjct: 131 DSAAPERQEEAEQRPEVPE---------GSASGEAGDSVDAEGPLGDNIEAEGPAGDSVE 181
Query: 238 LAGRLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQKLCPV 297
GR+ + + A D LG E G V R G
Sbjct: 182 AEGRVGDSVD------AEGPAGDSVDAEGPLGDNIQAE-GPAGDSVDAEGRVGD------ 228
Query: 298 PCWASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLKY--LAGQGADGEVDGGDGHEEHR 355
+ AEGP D +D + +G ++ AG G + V GD E
Sbjct: 229 ---SVDAEGPAG-----------DSVDAEGRVGDSVEAGDPAGDGVEAGVPAGDSVEAEG 274
Query: 356 QAGEHLARQPRVRPLHHVAQSPHAAPQAALA-LGRALAVAA 395
AG+ + + V+ P + +L+ A+ VAA
Sbjct: 275 PAGDSMDAEGPAGRARRVSGEPQQSGDGSLSPQAEAIEVAA 315
>gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo
sapiens]
Length = 434
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 66 AGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGD 111
AG+GV GGD++GH + H + GAP A +HGD
Sbjct: 329 AGDGVAAGGDYKGHSKFLVTAQNPAHEPSPGAPAPQELGAAHKHGD 374
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 34.7 bits (78), Expect = 0.25
Identities = 71/319 (22%), Positives = 104/319 (32%), Gaps = 51/319 (15%)
Query: 67 GEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHG------DDSPPVAGRD 120
G G + D EG+ + + H AR G+ +I H RHG D+ A
Sbjct: 1725 GSGHSEYSDSEGYSGVSHTHSGHTHGQARSQHGESESIVHERHGTIHGQTGDTTRHAHSG 1784
Query: 121 AGELGAVGHLVLDDVEQGREE---GDGHAEEEQQEPELAGAAAGRE-PQRLQPQGVARQA 176
G+ G G E +GH+ Q+ P G G+ Q + + + +
Sbjct: 1785 HGQSTQTGSRTTGRRSSGHSEYSDSEGHSGFSQR-PHSRGHTHGQAGSQHGESESIVDER 1843
Query: 177 H---HVQDAQRPQHAQH------QPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVD 227
H H Q H+Q Q R+G + + VH GH
Sbjct: 1844 HGTTHGQTGDTSGHSQSGHGQSTQSGSSTTGRRRSGHSESSDSEVHSGGSHT-HSGH--T 1900
Query: 228 QRQRAPQEGELAGRLNEPQEELQGEPA----HAHRLHDEDVVAHLGTVALGERGRDAGGV 283
Q Q GE +++ + G+ H H H + + G+ G RG
Sbjct: 1901 HSQARSQHGESESTVHKRHQTTHGQTGDTTEHGHPSHGQTI--QTGSRTTGRRG------ 1952
Query: 284 SGPSRKGGQKLCPVPCWASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLK----YLAGQ 339
SG S S +EGP + T H + GS + GQ
Sbjct: 1953 SGHSE------------YSDSEGPSGVSHTHSGHTHGQAGSHYPESGSSVHERHGTTHGQ 2000
Query: 340 GADGEVDGGDGHEEHRQAG 358
AD G GH + Q G
Sbjct: 2001 TADTTRHGHSGHGQSTQRG 2019
>gi|110611218 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 34.7 bits (78), Expect = 0.25
Identities = 82/373 (21%), Positives = 135/373 (36%), Gaps = 52/373 (13%)
Query: 140 EEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVAV 199
E+ + ++EQQ L AA E Q LQ Q R++ ++A + + + L
Sbjct: 407 EKSEAVRQDEQQRKALEAKAAAFEKQVLQLQASHRES---EEALQKRLDEVSRELCHTQS 463
Query: 200 ARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGRLNEPQEELQGEPAHAHRL 259
+ A L A QQ+ Q EL +L + E++ + L
Sbjct: 464 SHASLRADAEKAQEQQQ-----------------QMAELHSKLQSSEAEVRSKCEELSGL 506
Query: 260 HDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQKLCPVPCWASQAEGPQAATWTPYFHAY 319
H + A L ER R + + GQ ASQAE Q T
Sbjct: 507 HGQLQEARAENSQLTERIRSIEALL----EAGQARDAQDVQASQAEADQQQT------RL 556
Query: 320 KDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEHLA--RQPRVRPLHHVAQSP 377
K+ GL L +V D E++ +A E LA Q LH + Q+
Sbjct: 557 KELESQVSGLEKEAIELREAVEQQKVKNNDLREKNWKAMEALATAEQACKEKLHSLTQAK 616
Query: 378 HAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQV------------AALAAA 425
+ + + A LA+ + L + E L L+ A ++
Sbjct: 617 EESEKQLCLIEAQTMEALLALLPELSVLAQQNYTEWLQDLKEKGPTLLKHPPAPAEPSSD 676
Query: 426 VQVVLRDAPVQQLLLEGQ----RAHLAQQP----QLARAQEGQDSAEGPRVAVEEELVAG 477
+ LR+A Q L+ + R+ LA+ L ++ E ++ +V EE +
Sbjct: 677 LASKLREAEETQSTLQAECDQYRSILAETEGMLRDLQKSVEEEEQVWRAKVGAAEEELQK 736
Query: 478 DVVVIAHVEDVVE 490
V + H+E++VE
Sbjct: 737 SRVTVKHLEEIVE 749
>gi|110611220 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 34.7 bits (78), Expect = 0.25
Identities = 82/373 (21%), Positives = 135/373 (36%), Gaps = 52/373 (13%)
Query: 140 EEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVAV 199
E+ + ++EQQ L AA E Q LQ Q R++ ++A + + + L
Sbjct: 407 EKSEAVRQDEQQRKALEAKAAAFEKQVLQLQASHRES---EEALQKRLDEVSRELCHTQS 463
Query: 200 ARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGRLNEPQEELQGEPAHAHRL 259
+ A L A QQ+ Q EL +L + E++ + L
Sbjct: 464 SHASLRADAEKAQEQQQ-----------------QMAELHSKLQSSEAEVRSKCEELSGL 506
Query: 260 HDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQKLCPVPCWASQAEGPQAATWTPYFHAY 319
H + A L ER R + + GQ ASQAE Q T
Sbjct: 507 HGQLQEARAENSQLTERIRSIEALL----EAGQARDAQDVQASQAEADQQQT------RL 556
Query: 320 KDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEHLA--RQPRVRPLHHVAQSP 377
K+ GL L +V D E++ +A E LA Q LH + Q+
Sbjct: 557 KELESQVSGLEKEAIELREAVEQQKVKNNDLREKNWKAMEALATAEQACKEKLHSLTQAK 616
Query: 378 HAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQV------------AALAAA 425
+ + + A LA+ + L + E L L+ A ++
Sbjct: 617 EESEKQLCLIEAQTMEALLALLPELSVLAQQNYTEWLQDLKEKGPTLLKHPPAPAEPSSD 676
Query: 426 VQVVLRDAPVQQLLLEGQ----RAHLAQQP----QLARAQEGQDSAEGPRVAVEEELVAG 477
+ LR+A Q L+ + R+ LA+ L ++ E ++ +V EE +
Sbjct: 677 LASKLREAEETQSTLQAECDQYRSILAETEGMLRDLQKSVEEEEQVWRAKVGAAEEELQK 736
Query: 478 DVVVIAHVEDVVE 490
V + H+E++VE
Sbjct: 737 SRVTVKHLEEIVE 749
>gi|40255149 Rho guanine nucleotide exchange factor (GEF) 19 [Homo
sapiens]
Length = 802
Score = 34.7 bits (78), Expect = 0.25
Identities = 41/146 (28%), Positives = 52/146 (35%), Gaps = 35/146 (23%)
Query: 37 HAQLRLGFDEELRPPEHHPLLLLLELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARG 96
H+ LRLG + R L G+G G G G E + + G ++R
Sbjct: 206 HSSLRLGRNSAARA-----------LISGSGTGAAREGKASGMEARSVE--MSGDRVSRP 252
Query: 97 APGDHVAIAHRRHGD---------DSPPVAGRDAGE-------LGAVGHLVLDDVEQGRE 140
APGD R GD + PP+ R E L +V + DV RE
Sbjct: 253 APGDS------REGDWSEPRLDTQEEPPLGSRSTNERRQSRFLLNSVLYQEYSDVASARE 306
Query: 141 EGDGHAEEEQQEPELAGAAAGREPQR 166
EEE E GA G P R
Sbjct: 307 LRRQQREEEGPGDEAEGAEEGPGPPR 332
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 34.3 bits (77), Expect = 0.32
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 11/111 (9%)
Query: 63 QVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAG 122
Q AG+G +D G +G Q Q QG +G P + G PP GR G
Sbjct: 57 QPSAGDGNQDDGPQQGPPQQGGQQ-QQGPPPPQGKPQ-----GPPQQGGHPPPPQGRPQG 110
Query: 123 ELGAVGHLVLDDVEQGREEGDGHAEEEQQ--EPELAGAAAGREPQRLQPQG 171
GH +GR +G QQ P G G PQ +PQG
Sbjct: 111 PPQQGGH---PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQG 158
Score = 31.6 bits (70), Expect = 2.1
Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 70 VEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGH 129
+ DGGD E + Q G ++ + GD + DD P G G
Sbjct: 32 ISDGGDSEQFLDEERQGPPLGGQQSQPSAGDG-------NQDDGPQQGPPQQGGQQQQGP 84
Query: 130 LVLDDVEQGREEGDGHAEEEQQEPELAGAAAGR-EPQRLQPQGVARQAHHVQDAQRPQHA 188
QG + GH Q P+ G P R +PQG +Q H Q P
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPG 144
Query: 189 QHQ 191
+ Q
Sbjct: 145 KPQ 147
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 33.9 bits (76), Expect = 0.42
Identities = 38/141 (26%), Positives = 52/141 (36%), Gaps = 23/141 (16%)
Query: 96 GAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEE---EQQE 152
G PG H + RHGD +GR GE E GR HA + +
Sbjct: 3634 GGPGRHASAKEHRHGDHGRH-SGRHTGE------------EPGRRAAKPHARDLGRHEAR 3680
Query: 153 PELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATACGGAV 212
P ++A P++ QP G A + Q + R A H + ++ G A G
Sbjct: 3681 PHSQPSSAPAMPKKGQP-GYPSSAEYSQPS-RASSAYH-----HASDSKKGSRQAHSGPA 3733
Query: 213 HQQRDVVGQDGHQVDQRQRAP 233
Q Q Q+ RQ AP
Sbjct: 3734 ALQSKAEPQAQPQLQGRQAAP 3754
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 33.9 bits (76), Expect = 0.42
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 237 ELAGRLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQK 293
EL R E +EEL+ E A R+ + A L ER +AGG S R+G +K
Sbjct: 1159 ELQARAEELEEELEAERAARARVEKQRAEAARELEELSERLEEAGGASAGQREGCRK 1215
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 33.5 bits (75), Expect = 0.55
Identities = 34/146 (23%), Positives = 44/146 (30%), Gaps = 19/146 (13%)
Query: 65 GAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRH---------GDDSPP 115
G G G+ GG HE + PG + HR H G P
Sbjct: 740 GPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRP 799
Query: 116 VAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGRE--------PQRL 167
G G G GH + G G GH E + G+ R P
Sbjct: 800 HEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGH 859
Query: 168 QPQGVARQAHHVQDAQRPQHAQHQPH 193
+P V H D + P +H+ H
Sbjct: 860 RPHDV--PGHRGHDHRGPPPHEHRGH 883
>gi|24308115 interferon regulatory factor 2 binding protein 1 [Homo
sapiens]
Length = 584
Score = 33.5 bits (75), Expect = 0.55
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 228 QRQRAPQ-EGELAGRLNEPQEELQ-----GEPAHAHRLHDEDVVAHLGTVA--LGERGRD 279
+R+ +P+ EGE AG++ +++ + G P A +A L VA LG +D
Sbjct: 380 RRKASPEPEGEAAGKMTTEEQQQRHWVAPGGPYSAETPGVPSPIAALKNVAEALGHSPKD 439
Query: 280 AGGVSGPSRKGGQKLCPVPCWASQAEGP 307
GG GP R GG P +S A+ P
Sbjct: 440 PGGGGGPVRAGGAS----PAASSTAQPP 463
>gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo
sapiens]
Length = 1101
Score = 33.5 bits (75), Expect = 0.55
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 61 ELQVGAGEGVEDGGD--------WEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDD 112
E QV AG +E G WE ++ A+ + + G H A + G+D
Sbjct: 760 EAQVEAGRDLEQGAQEDQVAEEKWEVVQKQEAEGVREDEDKGQREKGYHEARKDQGDGED 819
Query: 113 SPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQ 151
S G G +V + RE GDG AE +Q+
Sbjct: 820 SRSPEAATEGGAG--------EVSKERESGDGEAEGDQR 850
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 33.1 bits (74), Expect = 0.72
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 93 LARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGR--------EEGDG 144
LA G G+H R G+ + G+ + H VL ++QG +
Sbjct: 399 LAPGEFGNHRPKGALRPGNGPEILLGQGPPQQPPQQHRVLQQLQQGDWRLQQLHLQHRHP 458
Query: 145 HAEEEQQEPELAGAAAGREPQRLQPQGVARQAHH---VQDA--QRPQHAQHQPHLVQ 196
H +++QQ+ + ++ Q+ Q Q HH +QDA Q+ QHA Q ++Q
Sbjct: 459 HQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQ 515
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,928,291
Number of Sequences: 37866
Number of extensions: 1294453
Number of successful extensions: 5058
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 4836
Number of HSP's gapped (non-prelim): 264
length of query: 583
length of database: 18,247,518
effective HSP length: 108
effective length of query: 475
effective length of database: 14,157,990
effective search space: 6725045250
effective search space used: 6725045250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.