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Search of human proteins with 111955063
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|111955063 GTP-binding protein 10 isoform 1 [Homo sapiens]
(308 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|111955063 GTP-binding protein 10 isoform 1 [Homo sapiens] 621 e-178
gi|111955139 GTP-binding protein 10 isoform 2 [Homo sapiens] 496 e-140
gi|24308117 GTP binding protein 5 [Homo sapiens] 148 7e-36
gi|4758796 developmentally regulated GTP binding protein 1 [Homo... 59 4e-09
gi|4557537 developmentally regulated GTP binding protein 2 [Homo... 51 1e-06
gi|58761500 Obg-like ATPase 1 isoform 1 [Homo sapiens] 49 4e-06
gi|55953087 G protein-binding protein CRFG [Homo sapiens] 40 0.003
gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... 32 0.71
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [... 32 0.71
gi|153791839 sodium channel associated protein 1 [Homo sapiens] 32 0.71
gi|9506611 guanine nucleotide binding protein-like 3 (nucleolar)... 32 0.71
gi|238776833 THO complex 4 [Homo sapiens] 32 0.93
gi|188528616 testis specific, 10 [Homo sapiens] 32 0.93
gi|13376858 testis specific, 10 [Homo sapiens] 32 0.93
gi|31542537 cell division cycle associated 7-like isoform 1 [Hom... 32 0.93
gi|13376574 ADP-ribosylation factor-like 14 [Homo sapiens] 32 0.93
gi|6912588 pseudoautosomal GTP-binding protein-like protein [Hom... 30 2.1
gi|93277113 GTP_binding protein [Homo sapiens] 30 2.1
gi|15431310 keratin 14 [Homo sapiens] 30 2.7
gi|208022637 hypothetical protein LOC130162 isoform 1 [Homo sapi... 30 2.7
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 30 2.7
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 30 2.7
gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens] 29 4.6
gi|66912176 leucine rich repeat containing 66 [Homo sapiens] 29 4.6
gi|126116565 MYC binding protein 2 [Homo sapiens] 29 6.0
gi|56549685 GTP-binding protein 8 isoform 1 [Homo sapiens] 29 6.0
gi|119943086 Tax1 (human T-cell leukemia virus type I) binding p... 28 7.9
gi|21361682 Tax1 (human T-cell leukemia virus type I) binding pr... 28 7.9
gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens] 28 7.9
>gi|111955063 GTP-binding protein 10 isoform 1 [Homo sapiens]
Length = 308
Score = 621 bits (1601), Expect = e-178
Identities = 308/308 (100%), Positives = 308/308 (100%)
Query: 1 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKD 60
MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKD
Sbjct: 1 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKD 60
Query: 61 RYPRKRFVAGVGANSKFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQIS 120
RYPRKRFVAGVGANSKFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQIS
Sbjct: 61 RYPRKRFVAGVGANSKFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQIS 120
Query: 121 VADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTK 180
VADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTK
Sbjct: 121 VADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTK 180
Query: 181 ELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQ 240
ELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQ
Sbjct: 181 ELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQ 240
Query: 241 HIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEPPSKHAV 300
HIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEPPSKHAV
Sbjct: 241 HIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEPPSKHAV 300
Query: 301 TTSKMDII 308
TTSKMDII
Sbjct: 301 TTSKMDII 308
>gi|111955139 GTP-binding protein 10 isoform 2 [Homo sapiens]
Length = 387
Score = 496 bits (1277), Expect = e-140
Identities = 278/388 (71%), Positives = 284/388 (73%), Gaps = 81/388 (20%)
Query: 1 MVHCSCVLFRKYGNFIDKLRLFTRG-----------GSGGMG------------------ 31
MVHCSCVLFRKYGNFIDKLRLFTRG G GG G
Sbjct: 1 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKD 60
Query: 32 -YPR----------------------------------------LGGEGGKGGDVWVVAQ 50
YPR + GE K D +VAQ
Sbjct: 61 RYPRKRFVAGVGANSKISALKGSKGKDCEIPVPVGISVTDENGKIIGELNKENDRILVAQ 120
Query: 51 NRMTLKQLKDRYPRK----------RFVAGVGANSKFPNAGKSSLLSCVSHAKPAIADYA 100
+ K L + P K + +A VG FPNAGKSSLLSCVSHAKPAIADYA
Sbjct: 121 GGLGGKLLTNFLPLKGQKRIIHLDLKLIADVGLVG-FPNAGKSSLLSCVSHAKPAIADYA 179
Query: 101 FTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGF 160
FTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGF
Sbjct: 180 FTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGF 239
Query: 161 QLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNP 220
QLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNP
Sbjct: 240 QLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNP 299
Query: 221 KDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQL 280
KDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQL
Sbjct: 300 KDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQL 359
Query: 281 LNLWISDTMSSTEPPSKHAVTTSKMDII 308
LNLWISDTMSSTEPPSKHAVTTSKMDII
Sbjct: 360 LNLWISDTMSSTEPPSKHAVTTSKMDII 387
>gi|24308117 GTP binding protein 5 [Homo sapiens]
Length = 406
Score = 148 bits (373), Expect = 7e-36
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 38/244 (15%)
Query: 35 LGGEGGKGGDVWVVAQNRMTLK-------QLKDRYPRKRFVAGVGANSKFPNAGKSSLLS 87
LGG GGKG ++ NR + Q + + + VA G FPNAGKSSLL
Sbjct: 184 LGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVG-FPNAGKSSLLR 242
Query: 88 CVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIER 147
+S+A+PA+A Y FTTLKP +G + Y QI+VAD+PG+I GAH N+G+G FL+HIER
Sbjct: 243 AISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIER 302
Query: 148 TRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQ 207
R LLFVVD+S Q TQ + L ELE+Y++ L +P + NK+DLP+AQ
Sbjct: 303 CRFLLFVVDLS--QPEPWTQ-------VDDLKYELEMYEKGLSARPHAIVANKIDLPEAQ 353
Query: 208 DKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQ 267
+L L Q +I +SA+TGE +E+L ++ D
Sbjct: 354 ANLSQLRDHLG---------------------QEVIVLSALTGENLEQLLLHLKVLYDAY 392
Query: 268 ANQE 271
A E
Sbjct: 393 AEAE 396
Score = 29.3 bits (64), Expect = 4.6
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 13/61 (21%)
Query: 15 FIDKLRLFTRGGSGGMG------YPRL------GGEGGKGGDVWV-VAQNRMTLKQLKDR 61
F+D R+ GG+GG G PR GG+GG GG V + V Q +L + R
Sbjct: 72 FVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSR 131
Query: 62 Y 62
Y
Sbjct: 132 Y 132
>gi|4758796 developmentally regulated GTP binding protein 1 [Homo
sapiens]
Length = 367
Score = 59.3 bits (142), Expect = 4e-09
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 77 FPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKG 136
FP+ GKS+LLS ++ +A Y FTTL G I Y K I + DLPG+IEGA KG
Sbjct: 72 FPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAK-IQLLDLPGIIEGAKDGKG 130
Query: 137 MGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALL 196
G + + +L V+D+ + H + ++ ELE + L +KP +
Sbjct: 131 RGRQVIAVARTCNLILIVLDV--LKPLGHKK---------IIENELEGFGIRLNSKPPNI 179
Query: 197 AVNKMD 202
K D
Sbjct: 180 GFKKKD 185
>gi|4557537 developmentally regulated GTP binding protein 2 [Homo
sapiens]
Length = 364
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 77 FPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKG 136
FP+ GKS+ LS ++ A Y FTTL G I Y I + DLPG+IEGA KG
Sbjct: 70 FPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKG-ANIQLLDLPGIIEGAAQGKG 128
Query: 137 MGHKFLKHIERTRQLLFVV 155
G + + + RT ++ ++
Sbjct: 129 RGRQVIA-VARTADVIIMM 146
>gi|58761500 Obg-like ATPase 1 isoform 1 [Homo sapiens]
Length = 396
Score = 49.3 bits (116), Expect = 4e-06
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 22/131 (16%)
Query: 78 PNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQ----------------ISV 121
PN GKS+ + +++++ + ++ F T+ P ++ D + ++V
Sbjct: 31 PNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKIPAFLNV 90
Query: 122 ADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKE 181
D+ GL++GAH +G+G+ FL HI + + F+ T + + I ++
Sbjct: 91 VDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLT--RAFEDDDITHVEGSVDPI----RD 144
Query: 182 LELYKEELQTK 192
+E+ EELQ K
Sbjct: 145 IEIIHEELQLK 155
>gi|55953087 G protein-binding protein CRFG [Homo sapiens]
Length = 634
Score = 39.7 bits (91), Expect = 0.003
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 34/181 (18%)
Query: 50 QNRMTLKQLKDRYPRKRFVAGVGANSKFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELG 109
Q R L +L P R + G +PN GKSS ++ V+ A + YAFTT +G
Sbjct: 153 QVRQHLSRLPTIDPNTRTLLLCG----YPNVGKSSFINKVTRADVDVQPYAFTTKSLFVG 208
Query: 110 KIMYSDFKQISVADLPGL----IEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSH 165
+ Y + + V D PG+ +E + + L H+ +L+V+D+S + H
Sbjct: 209 HMDYK-YLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAA--VLYVMDLS--EQCGH 263
Query: 166 TQYRTAFETIILLTKELELY---KEELQTKPALLAVNKMDL-------PDAQDKFHELMS 215
L ++LEL+ + KP ++ NK D+ D Q F +L S
Sbjct: 264 G-----------LREQLELFQNIRPLFINKPLIVVANKCDVKRIAELSEDDQKIFTDLQS 312
Query: 216 Q 216
+
Sbjct: 313 E 313
>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
Length = 338
Score = 32.0 bits (71), Expect = 0.71
Identities = 40/195 (20%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 37 GEGGK----GGDVWVVAQNRMTLKQLKDRYPRKRFVAGVGANSKFPNAGKSSLLSCVSHA 92
G GGK GGD+ V+++ +++ + R+ ++ +++ SC
Sbjct: 88 GAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLN------------NAVGSC---Q 132
Query: 93 KPAIADYAFTTLKPELGKIMYSDFKQIS---VADLPGLIEGAHMNKGMGHKFLKHIERTR 149
KP +A T+ +G ++ F+ + + +P G + G G+ FL ++
Sbjct: 133 KPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGY-FLPRLQG-- 189
Query: 150 QLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDK 209
+L + + ++GF+L YR T + +++L + +E+L AL + +K ++ +
Sbjct: 190 KLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLL---ALKSPSKENIASVLEN 246
Query: 210 FHELMSQLQNPKDFL 224
+H S++ K F+
Sbjct: 247 YH-TESKIDRDKSFI 260
>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
[Homo sapiens]
Length = 386
Score = 32.0 bits (71), Expect = 0.71
Identities = 40/195 (20%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 37 GEGGK----GGDVWVVAQNRMTLKQLKDRYPRKRFVAGVGANSKFPNAGKSSLLSCVSHA 92
G GGK GGD+ V+++ +++ + R+ ++ +++ SC
Sbjct: 88 GAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLN------------NAVGSC---Q 132
Query: 93 KPAIADYAFTTLKPELGKIMYSDFKQIS---VADLPGLIEGAHMNKGMGHKFLKHIERTR 149
KP +A T+ +G ++ F+ + + +P G + G G+ FL ++
Sbjct: 133 KPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGY-FLPRLQG-- 189
Query: 150 QLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDK 209
+L + + ++GF+L YR T + +++L + +E+L AL + +K ++ +
Sbjct: 190 KLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLL---ALKSPSKENIASVLEN 246
Query: 210 FHELMSQLQNPKDFL 224
+H S++ K F+
Sbjct: 247 YH-TESKIDRDKSFI 260
>gi|153791839 sodium channel associated protein 1 [Homo sapiens]
Length = 688
Score = 32.0 bits (71), Expect = 0.71
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 173 ETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMI 232
ET+ L ++L+L +E L +L + E M++ Q +H+FE
Sbjct: 128 ETVRNLQEQLQLANQEKTQAVELWQTVSQELDRLHKLYQEHMTEAQ-----IHVFESQKQ 182
Query: 233 PERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQA 268
++ +FQ + VT E +E K++ EQ+
Sbjct: 183 KDQLFDFQQLTKQLHVTNENMEVTNQQFLKTVTEQS 218
>gi|9506611 guanine nucleotide binding protein-like 3
(nucleolar)-like [Homo sapiens]
Length = 582
Score = 32.0 bits (71), Expect = 0.71
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 78 PNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDF--KQISVADLPGLIEGAHMNK 135
PN GKSSL++ + ++ P + K M + K I + D PG++ G +
Sbjct: 261 PNVGKSSLINSLKRSRACSVGAV-----PGITKFMQEVYLDKFIRLLDAPGIVPGPNSEV 315
Query: 136 GMGHKFLKHIERTRQLLFVVD----------------ISGFQLSSHTQYRTAFETIILLT 179
G + H+++ + V+ +SGFQ + H + TA +
Sbjct: 316 GTILRNCVHVQKLADPVTPVETILQRCNLEEISNYYGVSGFQTTEH--FLTAVAHRLGKK 373
Query: 180 KELELYKEELQTKPAL 195
K+ LY +E K L
Sbjct: 374 KKGGLYSQEQAAKAVL 389
>gi|238776833 THO complex 4 [Homo sapiens]
Length = 264
Score = 31.6 bits (70), Expect = 0.93
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 16 IDKLRLFTRGG-SGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPRKRFVAGVGAN 74
I KL RGG GG G R G +GG+GG A+ +++R R AG G
Sbjct: 19 IIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPAIARGAAGGGGR 78
Query: 75 SK 76
++
Sbjct: 79 NR 80
>gi|188528616 testis specific, 10 [Homo sapiens]
Length = 698
Score = 31.6 bits (70), Expect = 0.93
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 6/135 (4%)
Query: 139 HKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAV 198
HK + +E Q + +S S T+ E I L EL +L K + +
Sbjct: 484 HKSVVKMEEELQKVQFEKVSALADLSSTR-----ELCIKLDSSKELLNRQLVAKDQEIEM 538
Query: 199 NKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKN 258
+ +L A + L SQ+ N + + E ++ R E+Q I + E I+ LK
Sbjct: 539 RENELDSAHSEIELLRSQMANERISMQNLEALLVANRDKEYQSQIALQEKESE-IQLLKE 597
Query: 259 CIRKSLDEQANQEND 273
+ + ++ A Q D
Sbjct: 598 HLCLAENKMAIQSRD 612
>gi|13376858 testis specific, 10 [Homo sapiens]
Length = 698
Score = 31.6 bits (70), Expect = 0.93
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 6/135 (4%)
Query: 139 HKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAV 198
HK + +E Q + +S S T+ E I L EL +L K + +
Sbjct: 484 HKSVVKMEEELQKVQFEKVSALADLSSTR-----ELCIKLDSSKELLNRQLVAKDQEIEM 538
Query: 199 NKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKN 258
+ +L A + L SQ+ N + + E ++ R E+Q I + E I+ LK
Sbjct: 539 RENELDSAHSEIELLRSQMANERISMQNLEALLVANRDKEYQSQIALQEKESE-IQLLKE 597
Query: 259 CIRKSLDEQANQEND 273
+ + ++ A Q D
Sbjct: 598 HLCLAENKMAIQSRD 612
>gi|31542537 cell division cycle associated 7-like isoform 1 [Homo
sapiens]
Length = 454
Score = 31.6 bits (70), Expect = 0.93
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 212 ELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQE 271
EL ++ Q PK+ +F E V F+ +P+ ++ E ++C E Q+
Sbjct: 2 ELATRYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSSE-----ESCDSFDSLESGKQQ 56
Query: 272 NDALHKK----QLLNLWISDTMSSTE 293
+ H K +L ++I DT S TE
Sbjct: 57 DVRFHSKYFTEELRRIFIEDTDSETE 82
>gi|13376574 ADP-ribosylation factor-like 14 [Homo sapiens]
Length = 192
Score = 31.6 bits (70), Expect = 0.93
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 25/113 (22%)
Query: 144 HIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDL 203
+ E T L++VVD + Q +Q + FE I L E ++ P +L NK D+
Sbjct: 78 YCENTDGLVYVVDSTDKQRLEESQRQ--FEHI--------LKNEHIKNVPVVLLANKQDM 127
Query: 204 PDAQDKFHELMSQLQNPKDFLHLFE-KNMIPERTVEFQHIIPISAVTGEGIEE 255
P A +D +F+ K + +R ++ P A+TGEG+ +
Sbjct: 128 PGA-----------LTAEDITRMFKVKKLCSDRN---WYVQPCCALTGEGLAQ 166
>gi|6912588 pseudoautosomal GTP-binding protein-like protein [Homo
sapiens]
Length = 403
Score = 30.4 bits (67), Expect = 2.1
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 20/119 (16%)
Query: 148 TRQLLFVVDISGF---------QLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAV 198
+R + VD GF + S T A +IL +++ + ELQ L +
Sbjct: 228 SRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTL 287
Query: 199 NKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELK 257
+ LP + M ++ N D ++P + +++P+SA+ G G++ELK
Sbjct: 288 RGLQLPAP---LLDSMVEVHNKVD--------LVPGYSPTEPNVVPVSALRGHGLQELK 335
>gi|93277113 GTP_binding protein [Homo sapiens]
Length = 334
Score = 30.4 bits (67), Expect = 2.1
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 184 LYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQHII 243
L++E L KP LL +NKMDL D ++ ++M L+ + ++ N + + V + II
Sbjct: 68 LFQETLGLKPHLLVLNKMDLADLTEQ-QKIMQHLEG-EGLKNVIFTNCVKDENV--KQII 123
Query: 244 PI 245
P+
Sbjct: 124 PM 125
>gi|15431310 keratin 14 [Homo sapiens]
Length = 472
Score = 30.0 bits (66), Expect = 2.7
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 22 FTRGGSGGMGYPRLGGEGG--KGGDVWVVAQNRMTLKQLKDR 61
F G GG+G GG GG GGD +V ++T++ L DR
Sbjct: 84 FGGGYGGGLGAGLGGGFGGGFAGGDGLLVGSEKVTMQNLNDR 125
>gi|208022637 hypothetical protein LOC130162 isoform 1 [Homo
sapiens]
Length = 586
Score = 30.0 bits (66), Expect = 2.7
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 62 YPRKRFVAGVGANSKFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISV 121
Y RKR + + A + + S + S + H K A+Y + ++ Y F +
Sbjct: 111 YYRKRTIQ-LEAKMRIIESNSSKIQSQIDHIKQCRAEY-------DTKEVKYCTFSKDPS 162
Query: 122 ADLPGLIEGAHMNKGMGHKFLKHIE 146
+PG+ MN K++KH+E
Sbjct: 163 KPIPGMTLQESMNLDALTKYMKHLE 187
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 30.0 bits (66), Expect = 2.7
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 20 RLFTRGGSGGMGYPRLGGEGGKGG 43
R +RGG GG G+ R GG GG+GG
Sbjct: 5 RFRSRGGGGG-GFHRRGGGGGRGG 27
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin
(with transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 30.0 bits (66), Expect = 2.7
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 46/188 (24%)
Query: 100 AFTTLKPELGKIMYSDFKQIS-VADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDIS 158
AFT L E +++ S K++S V +L ++ MN L ER R+L +
Sbjct: 738 AFTALSEERDQLL-SQVKELSMVTELRAQVKQLEMN-------LAEAERQRRLDY----- 784
Query: 159 GFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHE------ 212
+ +TA + LLT+++ E ++K + V + +L D Q +F E
Sbjct: 785 --------ESQTAHDN--LLTEQIHSLSIEAKSKDVKIEVLQNELDDVQLQFSEQSTLIR 834
Query: 213 -LMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQE 271
L SQLQN +++ + E +HI +EEL + + E +
Sbjct: 835 SLQSQLQN--------KESEVLEGAERVRHI-------SSKVEELSQALSQKELEITKMD 879
Query: 272 NDALHKKQ 279
L KK+
Sbjct: 880 QLLLEKKR 887
>gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens]
Length = 182
Score = 29.3 bits (64), Expect = 4.6
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 41/190 (21%)
Query: 79 NAGKSSLLSCVSHAKPAIADYAFTTLKPELG---KIMYSDFKQISVADLPGLIEGAHMNK 135
NAGK++LL +A + + P G K + S +++V D+ G +
Sbjct: 27 NAGKTTLLK-------QLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGG-------QR 72
Query: 136 GMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPAL 195
+ + + E T L++V+D + R FE EL L +E+L P L
Sbjct: 73 KIRPYWKNYFENTDILIYVIDSAD---------RKRFEETGQELAEL-LEEEKLSCVPVL 122
Query: 196 LAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEE 255
+ NK DL A E+ L LH I +R + Q SA+TGEG+++
Sbjct: 123 IFANKQDLLTAAPA-SEIAEGLN-----LHT-----IRDRVWQIQSC---SALTGEGVQD 168
Query: 256 LKNCIRKSLD 265
N + K+++
Sbjct: 169 GMNWVCKNVN 178
>gi|66912176 leucine rich repeat containing 66 [Homo sapiens]
Length = 880
Score = 29.3 bits (64), Expect = 4.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 266 EQANQENDALHKKQLLNLWISDTMSSTEPPSKHAVTTSKM 305
E + D +H+ +L W +T++ EP S H+V S +
Sbjct: 519 ELMSAAQDHIHRNDILGEWTYETVAQEEPLSAHSVGVSSV 558
>gi|126116565 MYC binding protein 2 [Homo sapiens]
Length = 4640
Score = 28.9 bits (63), Expect = 6.0
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 10/50 (20%)
Query: 27 SGGMGYPRLG----------GEGGKGGDVWVVAQNRMTLKQLKDRYPRKR 66
+GG GY +G G+GG GG W + +R K L+++ R
Sbjct: 3229 AGGQGYNSIGHFCGGWAGNCGDGGIGGSTWYLVCDRCREKYLREKQAAAR 3278
>gi|56549685 GTP-binding protein 8 isoform 1 [Homo sapiens]
Length = 284
Score = 28.9 bits (63), Expect = 6.0
Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 33/183 (18%)
Query: 79 NAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIM--YSDFKQISVADLPGL-IEGAHMNK 135
N GKSSL+ + P + + KP K M + K +V D+PG
Sbjct: 120 NVGKSSLIKALFSLAPEVE--VRVSKKPGHTKKMNFFKVGKHFTVVDMPGYGFRAPEDFV 177
Query: 136 GMGHKFLKHIERTRQLLFVVD-ISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPA 194
M +LK ++ +VD + G Q + + I + +E L P
Sbjct: 178 DMVETYLKERRNLKRTFLLVDSVVGIQKTDNIA--------IEMCEEFAL--------PY 221
Query: 195 LLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIE 254
++ + K+D K H L LQ K F+++ + P+ + P+SAVT GI
Sbjct: 222 VIVLTKID---KSSKGHLLKQVLQIQK-FVNMKTQGCFPQ-------LFPVSAVTFSGIH 270
Query: 255 ELK 257
L+
Sbjct: 271 LLR 273
>gi|119943086 Tax1 (human T-cell leukemia virus type I) binding
protein 1 isoform b [Homo sapiens]
Length = 747
Score = 28.5 bits (62), Expect = 7.9
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 183 ELYKEELQTKPAL-LAVN-KMDLPDAQDKFHELMSQLQNPKD 222
EL K EL+ K + +A N K++L + QD + EL L+NP +
Sbjct: 558 ELAKMELKWKEQVKIAENVKLELAEVQDNYKELKRSLENPAE 599
>gi|21361682 Tax1 (human T-cell leukemia virus type I) binding
protein 1 isoform a [Homo sapiens]
Length = 789
Score = 28.5 bits (62), Expect = 7.9
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 183 ELYKEELQTKPAL-LAVN-KMDLPDAQDKFHELMSQLQNPKD 222
EL K EL+ K + +A N K++L + QD + EL L+NP +
Sbjct: 558 ELAKMELKWKEQVKIAENVKLELAEVQDNYKELKRSLENPAE 599
>gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens]
Length = 757
Score = 28.5 bits (62), Expect = 7.9
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 253 IEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMS 290
I+ LK ++E + NDALH+KQLL L + + ++
Sbjct: 74 IDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDNQLA 111
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,816,129
Number of Sequences: 37866
Number of extensions: 521272
Number of successful extensions: 2296
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2266
Number of HSP's gapped (non-prelim): 38
length of query: 308
length of database: 18,247,518
effective HSP length: 102
effective length of query: 206
effective length of database: 14,385,186
effective search space: 2963348316
effective search space used: 2963348316
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.