Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 169213164

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169213164 PREDICTED: similar to zinc finger protein 195
[Homo sapiens]
         (55 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169212991 PREDICTED: similar to zinc finger protein 195 [Homo...   115   6e-27
gi|169213164 PREDICTED: similar to zinc finger protein 195 [Homo...   115   6e-27
gi|169212793 PREDICTED: similar to zinc finger protein 195 [Homo...   115   6e-27
gi|116014332 zinc finger protein 195 isoform 3 [Homo sapiens]          72   7e-14
gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]           72   1e-13
gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]           72   1e-13
gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]           72   1e-13
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]          70   4e-13
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]          70   4e-13
gi|226958478 zinc finger protein 727 [Homo sapiens]                    68   2e-12
gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo...    68   2e-12
gi|224586910 zinc finger protein 679 [Homo sapiens]                    67   3e-12
gi|169171772 PREDICTED: similar to hCG40110 [Homo sapiens]             67   4e-12
gi|169172289 PREDICTED: similar to hCG40110 [Homo sapiens]             67   4e-12
gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo sap...    67   4e-12
gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens]             67   4e-12
gi|116284402 zinc finger protein 682 isoform 2 [Homo sapiens]          67   4e-12
gi|15150801 zinc finger protein 682 isoform 1 [Homo sapiens]           67   4e-12
gi|226529227 zinc finger protein 716 [Homo sapiens]                    62   7e-11
gi|239754572 PREDICTED: zinc finger protein 716 [Homo sapiens]         62   7e-11
gi|239743176 PREDICTED: zinc finger protein 716 [Homo sapiens]         62   7e-11
gi|239508840 PREDICTED: zinc finger protein 716 [Homo sapiens]         62   7e-11
gi|226958483 zinc finger protein 735 [Homo sapiens]                    62   1e-10
gi|195963403 zinc finger protein 720 [Homo sapiens]                    61   2e-10
gi|169790765 zinc finger protein 85 [Homo sapiens]                     61   2e-10
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]         60   3e-10
gi|148806865 zinc finger protein 492 [Homo sapiens]                    60   5e-10
gi|148806912 zinc finger protein 98 [Homo sapiens]                     60   5e-10
gi|239754999 PREDICTED: Zinc finger protein ENSP00000351689 [Hom...    59   6e-10
gi|239749565 PREDICTED: Zinc finger protein ENSP00000351689 [Hom...    59   6e-10

>gi|169212991 PREDICTED: similar to zinc finger protein 195 [Homo
          sapiens]
          Length = 55

 Score =  115 bits (289), Expect = 6e-27
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQAGIQ 55
          MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQAGIQ
Sbjct: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQAGIQ 55


>gi|169213164 PREDICTED: similar to zinc finger protein 195 [Homo
          sapiens]
          Length = 55

 Score =  115 bits (289), Expect = 6e-27
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQAGIQ 55
          MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQAGIQ
Sbjct: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQAGIQ 55


>gi|169212793 PREDICTED: similar to zinc finger protein 195 [Homo
          sapiens]
          Length = 55

 Score =  115 bits (289), Expect = 6e-27
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQAGIQ 55
          MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQAGIQ
Sbjct: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQAGIQ 55


>gi|116014332 zinc finger protein 195 isoform 3 [Homo sapiens]
          Length = 557

 Score = 72.4 bits (176), Expect = 7e-14
 Identities = 35/51 (68%), Positives = 36/51 (70%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQ 51
          MLENY NLFS+GLTV KPGLITCLEQR EPWNV R E    H   S   TQ
Sbjct: 33 MLENYRNLFSVGLTVCKPGLITCLEQRKEPWNVKRQEAADGHPAMSSHFTQ 83


>gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]
          Length = 583

 Score = 71.6 bits (174), Expect = 1e-13
 Identities = 32/48 (66%), Positives = 37/48 (77%)

Query: 1   MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCS 48
           MLENY NL S+G+ VSKP LITCLEQR EPWNV +HETV +H   + S
Sbjct: 194 MLENYRNLVSLGIAVSKPDLITCLEQRNEPWNVKKHETVARHPVSAVS 241


>gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]
          Length = 583

 Score = 71.6 bits (174), Expect = 1e-13
 Identities = 32/48 (66%), Positives = 37/48 (77%)

Query: 1   MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCS 48
           MLENY NL S+G+ VSKP LITCLEQR EPWNV +HETV +H   + S
Sbjct: 194 MLENYRNLVSLGIAVSKPDLITCLEQRNEPWNVKKHETVARHPVSAVS 241


>gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]
          Length = 583

 Score = 71.6 bits (174), Expect = 1e-13
 Identities = 32/48 (66%), Positives = 37/48 (77%)

Query: 1   MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCS 48
           MLENY NL S+G+ VSKP LITCLEQR EPWNV +HETV +H   + S
Sbjct: 194 MLENYRNLVSLGIAVSKPDLITCLEQRNEPWNVKKHETVARHPVSAVS 241


>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
          Length = 606

 Score = 70.1 bits (170), Expect = 4e-13
 Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 7/54 (12%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETV-------VKHSTESC 47
          MLENY NLFS+GLTV KPGLITCLEQR EPWNV R E           H+T++C
Sbjct: 33 MLENYRNLFSVGLTVCKPGLITCLEQRKEPWNVKRQEAADGHPEMGFHHATQAC 86


>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
          Length = 629

 Score = 70.1 bits (170), Expect = 4e-13
 Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 7/54 (12%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETV-------VKHSTESC 47
          MLENY NLFS+GLTV KPGLITCLEQR EPWNV R E           H+T++C
Sbjct: 33 MLENYRNLFSVGLTVCKPGLITCLEQRKEPWNVKRQEAADGHPEMGFHHATQAC 86


>gi|226958478 zinc finger protein 727 [Homo sapiens]
          Length = 499

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 32/50 (64%), Positives = 35/50 (70%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSIT 50
          MLENYGNLFS+GL + KP LIT LEQR EPWN  R +TV KH   S   T
Sbjct: 33 MLENYGNLFSLGLAIFKPDLITYLEQRKEPWNARRQKTVAKHPAGSLHFT 82


>gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1102

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 32/50 (64%), Positives = 35/50 (70%)

Query: 1   MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSIT 50
           MLENYGNLFS+GL + KP LIT LEQR EPWN  R +TV KH   S   T
Sbjct: 472 MLENYGNLFSLGLAIFKPDLITYLEQRKEPWNARRQKTVAKHPAGSLHFT 521



 Score = 61.6 bits (148), Expect = 1e-10
 Identities = 29/51 (56%), Positives = 33/51 (64%)

Query: 1   MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQ 51
           MLENY NL S+G+  SKP LITCLEQ  E WN+ R+E V KH       TQ
Sbjct: 88  MLENYRNLVSLGIADSKPDLITCLEQNKEAWNIKRNEMVAKHPVTCSHFTQ 138



 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 19/31 (61%), Positives = 21/31 (67%)

Query: 12 GLTVSKPGLITCLEQRIEPWNVTRHETVVKH 42
          G+ VSKP LI CL Q  EPWN  R+E V KH
Sbjct: 7  GIAVSKPDLINCLGQNKEPWNTKRNEMVAKH 37


>gi|224586910 zinc finger protein 679 [Homo sapiens]
          Length = 411

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 31/51 (60%), Positives = 35/51 (68%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQ 51
          MLENY NL S+G+ VSKP LITCLEQ  EPWN+ R+E V KH       TQ
Sbjct: 45 MLENYRNLVSLGIAVSKPDLITCLEQNKEPWNIKRNEMVTKHPVMCSHFTQ 95


>gi|169171772 PREDICTED: similar to hCG40110 [Homo sapiens]
          Length = 427

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 31/50 (62%), Positives = 34/50 (68%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSIT 50
          MLENYGNL S+GL + KP L+TCLEQR EPW V R E V KH   S   T
Sbjct: 33 MLENYGNLVSLGLAIFKPDLMTCLEQRKEPWKVKRQEAVAKHPAGSFHFT 82


>gi|169172289 PREDICTED: similar to hCG40110 [Homo sapiens]
          Length = 427

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 31/50 (62%), Positives = 34/50 (68%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSIT 50
          MLENYGNL S+GL + KP L+TCLEQR EPW V R E V KH   S   T
Sbjct: 33 MLENYGNLVSLGLAIFKPDLMTCLEQRKEPWKVKRQEAVAKHPAGSFHFT 82


>gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo
          sapiens]
          Length = 427

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 31/50 (62%), Positives = 34/50 (68%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSIT 50
          MLENYGNL S+GL + KP L+TCLEQR EPW V R E V KH   S   T
Sbjct: 33 MLENYGNLVSLGLAIFKPDLMTCLEQRKEPWKVKRQEAVAKHPAGSFHFT 82


>gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens]
          Length = 427

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 31/50 (62%), Positives = 34/50 (68%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSIT 50
          MLENYGNL S+GL + KP L+TCLEQR EPW V R E V KH   S   T
Sbjct: 33 MLENYGNLVSLGLAIFKPDLMTCLEQRKEPWKVKRQEAVAKHPAGSFHFT 82


>gi|116284402 zinc finger protein 682 isoform 2 [Homo sapiens]
          Length = 466

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 33/51 (64%), Positives = 37/51 (72%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQ 51
          MLENY NL S+GLTVSKP LI+ LEQR EPWNV RHET+ K    S   T+
Sbjct: 1  MLENYRNLVSLGLTVSKPELISRLEQRQEPWNVKRHETIAKPPAMSSHYTE 51


>gi|15150801 zinc finger protein 682 isoform 1 [Homo sapiens]
          Length = 498

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 33/51 (64%), Positives = 37/51 (72%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQ 51
          MLENY NL S+GLTVSKP LI+ LEQR EPWNV RHET+ K    S   T+
Sbjct: 33 MLENYRNLVSLGLTVSKPELISRLEQRQEPWNVKRHETIAKPPAMSSHYTE 83


>gi|226529227 zinc finger protein 716 [Homo sapiens]
          Length = 495

 Score = 62.4 bits (150), Expect = 7e-11
 Identities = 30/51 (58%), Positives = 34/51 (66%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQ 51
          MLENY NL S+G+ VSKP LITCLEQ  EP N+ R+E V KH       TQ
Sbjct: 45 MLENYRNLVSLGIAVSKPDLITCLEQNKEPQNIKRNEMVAKHPVTCSHFTQ 95


>gi|239754572 PREDICTED: zinc finger protein 716 [Homo sapiens]
          Length = 412

 Score = 62.4 bits (150), Expect = 7e-11
 Identities = 30/51 (58%), Positives = 34/51 (66%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQ 51
          MLENY NL S+G+ VSKP LITCLEQ  EP N+ R+E V KH       TQ
Sbjct: 45 MLENYRNLVSLGIAVSKPDLITCLEQNKEPQNIKRNEMVAKHPVTCSHFTQ 95


>gi|239743176 PREDICTED: zinc finger protein 716 [Homo sapiens]
          Length = 412

 Score = 62.4 bits (150), Expect = 7e-11
 Identities = 30/51 (58%), Positives = 34/51 (66%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQ 51
          MLENY NL S+G+ VSKP LITCLEQ  EP N+ R+E V KH       TQ
Sbjct: 45 MLENYRNLVSLGIAVSKPDLITCLEQNKEPQNIKRNEMVAKHPVTCSHFTQ 95


>gi|239508840 PREDICTED: zinc finger protein 716 [Homo sapiens]
          Length = 412

 Score = 62.4 bits (150), Expect = 7e-11
 Identities = 30/51 (58%), Positives = 34/51 (66%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCSITQ 51
          MLENY NL S+G+ VSKP LITCLEQ  EP N+ R+E V KH       TQ
Sbjct: 45 MLENYRNLVSLGIAVSKPDLITCLEQNKEPQNIKRNEMVAKHPVTCSHFTQ 95


>gi|226958483 zinc finger protein 735 [Homo sapiens]
          Length = 412

 Score = 62.0 bits (149), Expect = 1e-10
 Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCS 48
          MLENY NLFS+G+TVSKP LI CLEQ  EP N+ R+E   KH   +CS
Sbjct: 45 MLENYRNLFSLGMTVSKPDLIACLEQNKEPQNIKRNEMAAKHPV-TCS 91


>gi|195963403 zinc finger protein 720 [Homo sapiens]
          Length = 126

 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 30/39 (76%), Positives = 31/39 (79%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETV 39
          MLENYGNL S+GL VSKP LIT LEQR EPWNV   ETV
Sbjct: 33 MLENYGNLVSLGLAVSKPDLITFLEQRKEPWNVKSAETV 71


>gi|169790765 zinc finger protein 85 [Homo sapiens]
          Length = 595

 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 29/48 (60%), Positives = 34/48 (70%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKHSTESCS 48
          MLENY NL  +G+TVSKP LITCLEQ  E W++ RHE +V   T  CS
Sbjct: 33 MLENYRNLVFLGITVSKPDLITCLEQGKEAWSMKRHEIMVAKPTVMCS 80


>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
          Length = 1215

 Score = 60.5 bits (145), Expect = 3e-10
 Identities = 28/42 (66%), Positives = 32/42 (76%)

Query: 1   MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVKH 42
           MLENY NL S+G+ VSKP LITCLEQ  EP N+ R+E V KH
Sbjct: 856 MLENYRNLVSLGIAVSKPDLITCLEQNKEPQNIKRNEMVAKH 897


>gi|148806865 zinc finger protein 492 [Homo sapiens]
          Length = 531

 Score = 59.7 bits (143), Expect = 5e-10
 Identities = 27/41 (65%), Positives = 30/41 (73%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVK 41
          MLENY NL  +G+  SKP LITCLEQ  EPWNV RHE V +
Sbjct: 1  MLENYRNLVFVGIAASKPDLITCLEQGKEPWNVKRHEMVAE 41


>gi|148806912 zinc finger protein 98 [Homo sapiens]
          Length = 572

 Score = 59.7 bits (143), Expect = 5e-10
 Identities = 27/41 (65%), Positives = 30/41 (73%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVK 41
          MLENY NL  +G+  SKP LITCLEQ  EPWNV RHE V +
Sbjct: 42 MLENYRNLVFVGIAASKPDLITCLEQGKEPWNVKRHEMVTE 82


>gi|239754999 PREDICTED: Zinc finger protein ENSP00000351689 [Homo
          sapiens]
          Length = 551

 Score = 59.3 bits (142), Expect = 6e-10
 Identities = 27/41 (65%), Positives = 30/41 (73%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVK 41
          MLENY NL  +G+  SKP LITCLEQ  EPWNV RHE V +
Sbjct: 33 MLENYRNLVFLGIAASKPDLITCLEQGKEPWNVKRHEMVAE 73


>gi|239749565 PREDICTED: Zinc finger protein ENSP00000351689 [Homo
          sapiens]
          Length = 551

 Score = 59.3 bits (142), Expect = 6e-10
 Identities = 27/41 (65%), Positives = 30/41 (73%)

Query: 1  MLENYGNLFSIGLTVSKPGLITCLEQRIEPWNVTRHETVVK 41
          MLENY NL  +G+  SKP LITCLEQ  EPWNV RHE V +
Sbjct: 33 MLENYRNLVFLGIAASKPDLITCLEQGKEPWNVKRHEMVAE 73


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.131    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,068,664
Number of Sequences: 37866
Number of extensions: 56531
Number of successful extensions: 532
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 208
Number of HSP's gapped (non-prelim): 329
length of query: 55
length of database: 18,247,518
effective HSP length: 29
effective length of query: 26
effective length of database: 17,149,404
effective search space: 445884504
effective search space used: 445884504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press