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Search of human proteins with 169210141
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169210141 PREDICTED: hypothetical protein [Homo sapiens]
(112 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169210141 PREDICTED: hypothetical protein [Homo sapiens] 229 4e-61
gi|169209609 PREDICTED: hypothetical protein [Homo sapiens] 226 3e-60
gi|169210596 PREDICTED: hypothetical protein [Homo sapiens] 226 3e-60
gi|56606125 hypothetical protein LOC201725 [Homo sapiens] 202 5e-53
gi|19924103 synapsin II isoform IIa [Homo sapiens] 37 0.003
gi|19924101 synapsin II isoform IIb [Homo sapiens] 37 0.003
gi|145199237 transcription elongation factor B polypeptide 3 bin... 35 0.013
gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens] 35 0.017
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 35 0.017
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 35 0.017
gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo ... 35 0.017
gi|39812378 RAN binding protein 9 [Homo sapiens] 34 0.022
gi|110431370 espin [Homo sapiens] 34 0.022
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 34 0.022
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 33 0.037
gi|157168329 formin 1 [Homo sapiens] 33 0.049
gi|41281981 toll-like receptor adaptor molecule 1 [Homo sapiens] 33 0.049
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 33 0.049
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 33 0.064
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 33 0.064
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 33 0.064
gi|124378039 SEC16 homolog A [Homo sapiens] 32 0.083
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 32 0.083
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 32 0.083
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 32 0.083
gi|239743666 PREDICTED: hypothetical protein XP_002342940 isofor... 32 0.083
gi|239743664 PREDICTED: hypothetical protein XP_002342939 isofor... 32 0.083
gi|167466201 WAS protein family homolog 1 [Homo sapiens] 32 0.083
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens] 32 0.083
gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo sa... 32 0.083
>gi|169210141 PREDICTED: hypothetical protein [Homo sapiens]
Length = 112
Score = 229 bits (584), Expect = 4e-61
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 1 MADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVGLQIG 60
MADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVGLQIG
Sbjct: 1 MADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVGLQIG 60
Query: 61 DAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD 112
DAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD
Sbjct: 61 DAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD 112
>gi|169209609 PREDICTED: hypothetical protein [Homo sapiens]
Length = 112
Score = 226 bits (576), Expect = 3e-60
Identities = 111/112 (99%), Positives = 111/112 (99%)
Query: 1 MADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVGLQIG 60
MADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEV LQIG
Sbjct: 1 MADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVELQIG 60
Query: 61 DAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD 112
DAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD
Sbjct: 61 DAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD 112
>gi|169210596 PREDICTED: hypothetical protein [Homo sapiens]
Length = 112
Score = 226 bits (576), Expect = 3e-60
Identities = 111/112 (99%), Positives = 111/112 (99%)
Query: 1 MADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVGLQIG 60
MADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEV LQIG
Sbjct: 1 MADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVELQIG 60
Query: 61 DAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD 112
DAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD
Sbjct: 61 DAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD 112
>gi|56606125 hypothetical protein LOC201725 [Homo sapiens]
Length = 113
Score = 202 bits (514), Expect = 5e-53
Identities = 104/113 (92%), Positives = 105/113 (92%), Gaps = 1/113 (0%)
Query: 1 MADPEKLQVSSPPPPPPS-PSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVGLQI 59
MADPE+LQVSSPPPPPPS PSSSDASAAS PG PVSLGWPVPSRSSG TVD LEEV LQI
Sbjct: 1 MADPEELQVSSPPPPPPSSPSSSDASAASSPGGPVSLGWPVPSRSSGPTVDQLEEVELQI 60
Query: 60 GDAAFSLTKLLEATSAVSAQVEELAFKCTEKARFLKTWRDLWKEGYDSLKPDD 112
GDAAFSLTKLLEATSAVSAQVEELAFKCTE ARFLKTWRDL KEGYDSLKPDD
Sbjct: 61 GDAAFSLTKLLEATSAVSAQVEELAFKCTENARFLKTWRDLLKEGYDSLKPDD 113
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 12 PPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVGLQIGDAAFSLTKLLE 71
PPPPPP P ++ ASAA SP P P+ + P VG SL++ ++
Sbjct: 35 PPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFS---SLSQAVK 91
Query: 72 ATSAVSAQVE 81
T+A + V+
Sbjct: 92 QTAASAGLVD 101
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 11 SPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSS 45
S PP S SSS +SA PG P + G PS SS
Sbjct: 482 SLPPSSSSSSSSSSSAPQRPGGPTTHG-DAPSSSS 515
>gi|19924101 synapsin II isoform IIb [Homo sapiens]
Length = 478
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 12 PPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVGLQIGDAAFSLTKLLE 71
PPPPPP P ++ ASAA SP P P+ + P VG SL++ ++
Sbjct: 35 PPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFS---SLSQAVK 91
Query: 72 ATSAVSAQVE 81
T+A + V+
Sbjct: 92 QTAASAGLVD 101
>gi|145199237 transcription elongation factor B polypeptide 3
binding protein 1 [Homo sapiens]
Length = 1221
Score = 35.0 bits (79), Expect = 0.013
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 4 PEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEE 54
P++L+ S PP P PS SSS +S+ S G+ V + + DP+EE
Sbjct: 567 PKRLKASPPPSPAPSSSSSSSSSTSSAGADVD--YSALEKEVDFDSDPMEE 615
>gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens]
Length = 753
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 10 SSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEE 54
SSPPPP PSP + D + P S PVP SS E+
Sbjct: 654 SSPPPPEPSPQAPDGPSLQLPAQTFSSA-PVPGSSSSTLPSSCEQ 697
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 7 LQVSSPPPPPPSPSSSDASAASYPGSPVSLGWP 39
L S+P PPP+PS S + G+P +L P
Sbjct: 435 LPASAPSAPPPAPSLGPGSQQAAFGNPPALLQP 467
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 5 EKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSS 45
+++Q PPPP PS +S P S VS G P PS SS
Sbjct: 440 QQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSG-PAPSPSS 479
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 5 EKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSS 45
+++Q PPPP PS +S P S VS G P PS SS
Sbjct: 400 QQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSG-PAPSPSS 439
>gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo
sapiens]
Length = 1214
Score = 34.7 bits (78), Expect = 0.017
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 12 PPPPPPSPSSSDASAASYPGSPVSL 36
PPPPPP SSD+ + PGSP L
Sbjct: 15 PPPPPPPEESSDSEPEAEPGSPQKL 39
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 4 PEKLQVSSPPPPPPSPSSSDASAASYPGSPVSL--------GWPVPSRSSG 46
P PPPPPP P +S A+ AS P +P L G P P+ +G
Sbjct: 76 PPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGAPTPALVAG 126
Score = 30.0 bits (66), Expect = 0.41
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 4 PEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLG 37
P ++PPPPPP P ++AA G P G
Sbjct: 74 PPPPATAAPPPPPPPPPPPASAAAPASGPPAPPG 107
Score = 27.3 bits (59), Expect = 2.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 4 PEKLQVSSPPPPPPSPSSSDASAASYPGSP 33
P ++ PPPPP P ASAA+ P
Sbjct: 73 PPPPPATAAPPPPPPPPPPPASAAAPASGP 102
>gi|110431370 espin [Homo sapiens]
Length = 854
Score = 34.3 bits (77), Expect = 0.022
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 2 ADPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSL 36
ADP+ + PPPPPP P +A+++ P P+ L
Sbjct: 587 ADPKASRELPPPPPPPPPPLPEAASSPPPAPPLPL 621
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 34.3 bits (77), Expect = 0.022
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 11 SPPPPPPSP--------SSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVGLQIGDA 62
+PPPPPP P S SA + PGS +S P P S T P G G
Sbjct: 781 APPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEGAFPGGG 840
Query: 63 A 63
A
Sbjct: 841 A 841
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 33.5 bits (75), Expect = 0.037
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 12 PPPPPPSPSSSDASAASYPGSP---VSLGWPVPSRSSG 46
PPPPPP+P D S A +P S+ P P+ SG
Sbjct: 770 PPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSG 807
Score = 29.3 bits (64), Expect = 0.71
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
Query: 4 PEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWP--------VPSRSSGRTVDPLEEV 55
PE+ Q P PP + S A AA P +P + P P RS RT+ P
Sbjct: 525 PERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGY 584
Query: 56 GLQIG 60
Q G
Sbjct: 585 SSQSG 589
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 12 PPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPLEEVG 56
PPP PP+P A A+S PG L P S P E+VG
Sbjct: 835 PPPAPPAP----APASSAPGHVAKLPQKEPVGCSKGGGPPREDVG 875
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 33.1 bits (74), Expect = 0.049
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 10 SSPPPPPPSPSSSDASAASYPGSPVSLGWPVP 41
+S PPPPP PS + + + P PVS G P+P
Sbjct: 650 ASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLP 681
Score = 30.0 bits (66), Expect = 0.41
Identities = 14/35 (40%), Positives = 14/35 (40%)
Query: 12 PPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSG 46
PPPPPP P S A P P P P G
Sbjct: 684 PPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGG 718
Score = 30.0 bits (66), Expect = 0.41
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 10 SSPPPPPPSPSSSDASAASYPGSP 33
+ PPPPPP P ++ A PG P
Sbjct: 696 AGPPPPPPPPPLPNSPAPPNPGGP 719
Score = 27.3 bits (59), Expect = 2.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 12 PPPPPPSPSSSDASAASYPGSP 33
PPPPPP P S+A P P
Sbjct: 681 PPPPPPPPPLPPPSSAGPPPPP 702
Score = 27.3 bits (59), Expect = 2.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 12 PPPPPPSPSSSDASAASYPGSP 33
PPPPPP P +SA P P
Sbjct: 682 PPPPPPPPLPPPSSAGPPPPPP 703
>gi|41281981 toll-like receptor adaptor molecule 1 [Homo sapiens]
Length = 712
Score = 33.1 bits (74), Expect = 0.049
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 10 SSPPPPPPSPSSSDASAASYPGS 32
+SPPPPPP PSS+ SA P S
Sbjct: 358 TSPPPPPPPPSSTPCSAHLTPSS 380
Score = 27.7 bits (60), Expect = 2.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 8 QVSSPPPPPPSPSSSDASAASYPGSPV-SLGWPVPSRSSG 46
Q +PPPP P P++ S +P SP P P +S G
Sbjct: 637 QAGTPPPPSPQPAAFPQS-LPFPQSPAFPTASPAPPQSPG 675
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related
ADP-ribose polymerase [Homo sapiens]
Length = 1327
Score = 33.1 bits (74), Expect = 0.049
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 10 SSPPPPPPSPSSSDASAASYPGSPVSLG 37
S+PPPPPP P S + + P SP + G
Sbjct: 25 SAPPPPPPPPLSPGLAPGTTPASPTASG 52
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 32.7 bits (73), Expect = 0.064
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 7 LQVSSPPPPPPSPSSSDASAASYPGS 32
+++ S PPPPPSPS++ A AA GS
Sbjct: 22 VKLESVPPPPPSPSAAAAGAAGARGS 47
Score = 28.9 bits (63), Expect = 0.92
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Query: 11 SPPP----PPPSPSSSDASAASY---PGSPVSLGWPVPSRSSGR 47
SPPP P PSP+++ +A++ P P++L P P GR
Sbjct: 289 SPPPLTLPPTPSPATAVTAASAQPPGPAPPITLEPPAPGLKRGR 332
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 11 SPPPPPPSP----SSSDASAASYPGSPVSLGWP 39
+PPPP P P ++S A A G+ L WP
Sbjct: 181 APPPPAPKPCKTVTTSGAKAGGGKGAGSRLSWP 213
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Query: 6 KLQVSSPPPPPPSPSSSDASAA-----SYPGSP 33
KL+ PPPP PS +++ A+ A PGSP
Sbjct: 23 KLESVPPPPPSPSAAAAGAAGARGSETGDPGSP 55
Score = 25.8 bits (55), Expect = 7.8
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 10 SSPPPPPPSPSSSDASAASYPGSPVSLGW---PVPSRSSGRTVDP 51
+ PP P+P+S + PG +SL W P P S G + DP
Sbjct: 88 AEPPALSPAPASPARPVSPAPGRRLSL-WAVPPGPPLSGGLSPDP 131
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 32.7 bits (73), Expect = 0.064
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 10 SSPPPPPPSPSSSDASAASYPG-SPVSLGWPVPSRSSGRTVDPLEEVGLQIGDAAFSLTK 68
++PPPPPP P S PG VS + P SS + P+ + ++ S T
Sbjct: 456 TTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSS--SPPPIAPLARAESTSSISSTN 513
Query: 69 LLEATSAVSAQVEELAFKCTEKARFLKTW 97
L A + + + E+ + ++ +F T+
Sbjct: 514 SLSAATTPTVENEQPSLVWFDRGKFYLTF 542
Score = 27.7 bits (60), Expect = 2.1
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 8 QVSSPPPPPPSPSSSDASAASYPGSPVSLGWPVPSRSSGRTVDPL 52
Q ++PPPPPP P+ ++ PGS G + S R PL
Sbjct: 407 QRATPPPPPP-PTYRTVVSSPGPGSGPGPGTTSGASSPARPATPL 450
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 32.7 bits (73), Expect = 0.064
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 12 PPPPPPSPSSSDASAASYPG-SPVSLGWPVPSRSSG------RTVDPLEEVGLQIGDAAF 64
PPPPPP P+ S P P S PV S G R V + ++ + +G
Sbjct: 431 PPPPPPPPALPGPGPVSVPELKPESSQTPVVSTRKGKCRGVRRMVVKMAKIPVSLGRRNK 490
Query: 65 SLTKLLEATSAVSAQVEELAFK 86
+ K+ +S++S + +EL +
Sbjct: 491 TTYKVSSLSSSLSVEGKELGLR 512
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 2 ADPEKLQVSSPPPPPPSPSSSDASAASYPGSPV 34
AD E L+++ PP PP P+ A+AA Y G P+
Sbjct: 1514 ADKEPLEMARPPGPPRGPA---AAAAGY-GCPL 1542
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 32.3 bits (72), Expect = 0.083
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 3 DPEKLQVSSPPPPPPSPSSSDASAASYPGSPVSLGWPV---PSRSSG---RTVDPLEEVG 56
+PE+ + + PPPP P + A+ + PG P G PV R++G R VD L G
Sbjct: 2145 EPEEEKKAPPPPPTSMPKTVQAAPPALPGPP---GAPVNMYSRRAAGTRARYVDVLNPSG 2201
Query: 57 LQIGDAAFS 65
Q + A +
Sbjct: 2202 TQRSEPALA 2210
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 32.3 bits (72), Expect = 0.083
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 12 PPPPPPSPSSSDASAASYPGSPV 34
PPPPP +P + +S PGSPV
Sbjct: 836 PPPPPLAPQKASGGGSSSPGSPV 858
Score = 28.9 bits (63), Expect = 0.92
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 5 EKLQVSSPPPPPPSPSSSDASAASYPG--SPVSLGWPVPSRSSGRTVDPLEE 54
E+ + PPPPPP P A + G SP PS S D EE
Sbjct: 689 ERHHPAPPPPPPPPPPPPLAQHPHHRGLLSPGGTSCSYPSEDSSEDEDDEEE 740
Score = 26.2 bits (56), Expect = 6.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 4 PEKLQVSSPPPPPPSPSSSDASA 26
P L PPPPPP P + A A
Sbjct: 279 PHLLGAPPPPPPPPPPLAELAGA 301
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 32.3 bits (72), Expect = 0.083
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 12 PPPPPPSPSSSDASAASYPGSPV 34
PPPPP +P + +S PGSPV
Sbjct: 836 PPPPPLAPQKASGGGSSSPGSPV 858
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 5 EKLQVSSPPPPPPSPSSSDASAASYPG--SPVSLGWPVPSRSSGRTVDPLEE 54
E+ + PPPPPP P A + G SP PS S D EE
Sbjct: 689 ERHHPAPPPPPPPPPPPPLAQHPHHRGLLSPGGTSCCYPSEDSSEDEDDEEE 740
Score = 26.2 bits (56), Expect = 6.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 4 PEKLQVSSPPPPPPSPSSSDASA 26
P L PPPPPP P + A A
Sbjct: 279 PHLLGAPPPPPPPPPPLAELAGA 301
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 32.3 bits (72), Expect = 0.083
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 12 PPPPPPSPSSSDASAASYPGSPV 34
PPPPP +P + +S PGSPV
Sbjct: 836 PPPPPLAPQKASGGGSSSPGSPV 858
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 5 EKLQVSSPPPPPPSPSSSDASAASYPG--SPVSLGWPVPSRSSGRTVDPLEE 54
E+ + PPPPPP P A + G SP PS S D EE
Sbjct: 689 ERHHPAPPPPPPPPPPPPLAQHPHHRGLLSPGGTSCCYPSEDSSEDEDDEEE 740
Score = 26.2 bits (56), Expect = 6.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 4 PEKLQVSSPPPPPPSPSSSDASA 26
P L PPPPPP P + A A
Sbjct: 279 PHLLGAPPPPPPPPPPLAELAGA 301
>gi|239743666 PREDICTED: hypothetical protein XP_002342940 isoform 2
[Homo sapiens]
Length = 465
Score = 32.3 bits (72), Expect = 0.083
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 1 MADPEKLQ----VSSPPPPPPSPSSSDASAASYPGSPVSLGWPV 40
+A+P K+ V +PPPPPP P + AS P P S PV
Sbjct: 288 VAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPV 331
>gi|239743664 PREDICTED: hypothetical protein XP_002342939 isoform 1
[Homo sapiens]
Length = 482
Score = 32.3 bits (72), Expect = 0.083
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 1 MADPEKLQ----VSSPPPPPPSPSSSDASAASYPGSPVSLGWPV 40
+A+P K+ V +PPPPPP P + AS P P S PV
Sbjct: 305 VAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPV 348
>gi|167466201 WAS protein family homolog 1 [Homo sapiens]
Length = 465
Score = 32.3 bits (72), Expect = 0.083
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 1 MADPEKLQ----VSSPPPPPPSPSSSDASAASYPGSPVSLGWPV 40
+A+P K+ V +PPPPPP P + AS P P S PV
Sbjct: 288 VAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPV 331
>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
Length = 452
Score = 32.3 bits (72), Expect = 0.083
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 2 ADPEKLQVSSPPPPPPSPSSSDA--SAASYPGSPVSLGWPVPSRSSGRTVDPLEEV 55
A P L VSSP PPP P ++DA + + P+ P+ SG +P +
Sbjct: 386 AAPGALPVSSPEPPPALPPAADAPVTQIGFEAPPLQGQAAAPASGSGADSEPARHI 441
>gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo
sapiens]
Length = 783
Score = 32.3 bits (72), Expect = 0.083
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 10 SSPPPPPPSPSSSDASAASYPGSPVSLGWPVPS 42
S PPPPP P+S AS+P P PVPS
Sbjct: 391 SLPPPPPSHPASQPPLPASHPSQP-----PVPS 418
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.127 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,885,286
Number of Sequences: 37866
Number of extensions: 320892
Number of successful extensions: 9103
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 344
Number of HSP's that attempted gapping in prelim test: 5452
Number of HSP's gapped (non-prelim): 2966
length of query: 112
length of database: 18,247,518
effective HSP length: 82
effective length of query: 30
effective length of database: 15,142,506
effective search space: 454275180
effective search space used: 454275180
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.