Search of human proteins with 11128043

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11128043 protocadherin gamma subfamily A, 9 isoform 1
precursor [Homo sapiens]
         (932 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...  1843   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...  1589   0.0  
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs...  1477   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...  1450   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...  1349   0.0  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...  1349   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...  1343   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...  1342   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...  1333   0.0  
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs...  1333   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...  1325   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...  1305   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...  1300   0.0  
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso...  1230   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...  1196   0.0  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...  1100   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...  1095   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...  1093   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...  1091   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...  1085   0.0  
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs...  1081   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...  1078   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...  1056   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...  1053   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...   926   0.0  
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs...   922   0.0  
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs...   920   0.0  
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs...   911   0.0  
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs...   908   0.0  
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs...   906   0.0  

>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1843 bits (4775), Expect = 0.0
 Identities = 932/932 (100%), Positives = 932/932 (100%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
           PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
           SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
           SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840

Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900

Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score = 1589 bits (4115), Expect = 0.0
 Identities = 808/808 (100%), Positives = 808/808 (100%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
           PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
           SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVP 808
           SQQSCEKNEPLCVSVDSKFPIEDTPLVP
Sbjct: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVP 808


>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1477 bits (3824), Expect = 0.0
 Identities = 751/932 (80%), Positives = 807/932 (86%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MAAP     RG L+LLC+LLG LWE    QIRYSVPEET+KG  VGNISKDL L+PR+LA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           +  VRIVSRGRTQLF+LNPRSG+L+TAGRIDREELCAQSPRCL+N   LVED+ KL+G+E
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           IE+ DIND+ PKFQ E LEVKINEIAVPGARYPLPEA+DPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +VQTGDNGAINPELVLERALDREE  AHHLVLTASDGG+P RSSTVRIHVTVLDTNDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           VF   IYRVKVLEN+PPGT LLT TASD DEGINGKVAYKF KINEKQ+ LFQLNENTGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           IS AKSLDYEECSFYEMEIQAED G L G TK+LISVEDVNDNRPEV ITSLFSPV E++
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
             GTVI   + HD+DSGKNGQVVC  ++NL F LE S  +YYRL+T + LDRE  S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           TV A+D GTPPLSTE  I L V DINDNPP F  ASYS Y+ ENN RG SIFS+ A+DPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           S EN++V YS+ EDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSN+SL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+ADSIP++L +LGSL+   D   S LTLYLVVAVA +SCVFL FV  LL LRLR WH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL+ +   L GVP SHFVGV+ V+AFLQTYSQE SLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
           SQ+ CEKN+ L  SVD      +     QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840

Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900

Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score = 1450 bits (3753), Expect = 0.0
 Identities = 737/920 (80%), Positives = 790/920 (85%)

Query: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
           LVLLC   G+ WEA A QI YS+PEE EKG  VGNISKDL L PRELAER VRIVSRGRT
Sbjct: 17  LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76

Query: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
           QLFSLNPRSG+L+TAGRIDREELCAQS RC+V+F +LVEDRVKL+GIEIEVTDIND+APK
Sbjct: 77  QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136

Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
           FQAE+L+VKINE    G R+PLPEAIDPDVGVNSLQSYQLSPN HFSL VQ+  NG   P
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196

Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
           ELVLE +LDREE   HHLVLTASDGG+P RS TV + VTV D NDNAPVF    YRV V 
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256

Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
           EN+P GT LLT TA+D DEG NG+V Y F K+ + Q L FQLN+ TGEI  +++LDYEE 
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316

Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
            FYE+EIQAEDGG      KVLI+VEDVNDN PE+TITSLFSPV ED+P GTV+ L N H
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376

Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
           D DS +NGQV CSI   L F LE S + YYRL+  + LDRE+ S YNITVTATD G+PPL
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436

Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
           STE H  LQV DINDNPP FSQ SY  Y+PENNARG SIFSV A DPDS EN+++IYSLA
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496

Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
           EDTIQG PLS+Y+SINSDTGVLYAL SFDYEQF +LQMQVTASDSG PPLSSNVSL LFV
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
           EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676

Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
           ADLGS + PA+ E SDLTLYLVVAVA VSCVFL FVI LLA RLR WH S LL+A+  GL
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736

Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
            GV  SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEKN+PL 
Sbjct: 737 TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLS 796

Query: 793 VSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
           +  DSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 797 LLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 856

Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
           LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 857 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 916

Query: 913 GKAPAGGNGNKKKSGKKEKK 932
           GKAPAGGNGNKKKSGKKEKK
Sbjct: 917 GKAPAGGNGNKKKSGKKEKK 936


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1349 bits (3491), Expect = 0.0
 Identities = 685/920 (74%), Positives = 767/920 (83%)

Query: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
           LVLL  LLG LWE   +QIRYSVPEE EKG  VG+IS+DL LEPRELAER VRI+ RGRT
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
           QLF+LNPRSG+LVTAGRIDREELC  + +C +N  +L+ED+VK+YG+E+EV DIND+AP 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
           F+   LE+KI+E A    R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+  P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
           ELVL+RALDREE  AHHLVLTASDGG+P R+ T RI V VLD NDNAP FAQ  YR  V 
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
           EN+  GT LL   A+D DEG+N +V Y F  +++K + +F+L+ N+G IST   LD+EE 
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
            FY+ME+QA D  G     KVLI+V DVNDN PEV +TSL S V E++P+GT+I L N +
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
           D+DS +NGQV+C IQ NL F LE S  +YY L+T  +LDRE+   YNITVTATDRGTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
           STE HI+L V D NDNPP F QASYS Y+PENN RG S+ SV A+DPD  EN+++ YSLA
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
           E+TIQG+ LS+YVSINSDTGVLYAL SFDYEQFRDLQ++V A D+G PPLSSNVSL LFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
           ADLGSL+ PA+ E SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+  GL
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
            G P SHFVGVDGV+AFLQTYS E SLT DSRKSHLIFPQPNYAD L+SQ+S EK+EPL 
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792

Query: 793 VSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
           +S DS F  +   L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852

Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
           LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912

Query: 913 GKAPAGGNGNKKKSGKKEKK 932
           GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1349 bits (3491), Expect = 0.0
 Identities = 685/932 (73%), Positives = 768/932 (82%), Gaps = 1/932 (0%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MAAP       RL+ +C LLG+L E RA QI YSV EE E+G +VGNI+KDL L PRELA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           ER VRIVSRGRTQLF+LNPRSGTLVTAGRIDREELC +SP C+ N ++L+ED VK+  +E
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           +E+ D+ND+ P F  E  E+K+ E   PGAR+PLPEA DPDVGVNSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +VQ+G +G   PELVLERALDREE   HHLVLTA DGG+P RS T RI + ++DTNDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           VF Q  Y V V ENVP GT LLT  A+D DEG NG V Y F K+ +K S LFQLN  +G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           I+    LDYE+  FY+++++A DG GL+  +KVL++V D NDN PEVT+TSL S V+E +
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
             GTVI LFN HD DSG NG V CSI +NL FTLE +  +YYRLLT + LDRE+ SEYNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           TVTATD+GTPPLSTE HI+LQV DINDNPP F  ASYS Y+PENN RG SI S+ A DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           S +N+R+ YSLAEDT QG+PLS+YVSINS+TG+LYALCSFDYEQFRDLQ+ +TASDSG P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY L K+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+ADSIPD+LADLGSL+  AD + S LTLYLVVAVA VSCVFL FV  LLAL+LR WH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL A    LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
           S++SCEK+EPL ++ D     +  P + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SRESCEKSEPLLITQD-LLETKGDPNLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839

Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899

Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1343 bits (3475), Expect = 0.0
 Identities = 690/931 (74%), Positives = 765/931 (82%), Gaps = 1/931 (0%)

Query: 2   AAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAE 61
           A P     RG   LL  LLG  WEA A +I YSV EET+KG  VG+I+KDL LEPRELAE
Sbjct: 3   AQPRGGDYRG-FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAE 61

Query: 62  RRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEI 121
           R VRI+SRGRTQLF+LN RSG+LVTAGRIDREE+CAQS RCLVNF +L+ED++ LY I++
Sbjct: 62  RGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDV 121

Query: 122 EVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLN 181
           E+ DIND+ P+F  E + VKI E   PG R+PL EA DPDVG NSLQSYQLSPN HFSL 
Sbjct: 122 EIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLA 181

Query: 182 VQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPV 241
           VQ+GD+    PELVLER LDREE   HHLVLTASDGG+P RSST  I VTV+D ND+ PV
Sbjct: 182 VQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPV 241

Query: 242 FAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEI 301
           F+   Y+V V ENVP GT LLT  A DLDEG+NG+V Y F KI  K   +F LN  TGEI
Sbjct: 242 FSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEI 301

Query: 302 STAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAP 361
           ST + LDYEE +FYEME+QA+DG G     KVLI+V DVNDN PEVT+TSL S + ED P
Sbjct: 302 STLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTP 361

Query: 362 QGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNIT 421
            GTVI LF   DRDSGKNG+V C+I ENL F LE S ++YYRL+T + LDRE  S YNIT
Sbjct: 362 LGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNIT 421

Query: 422 VTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDS 481
           + ATD GTPPLS E HI +QV D NDNPP F  +SYSVY+ ENN RG SIF V A D DS
Sbjct: 422 LKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDS 481

Query: 482 NENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPP 541
            +N+++ YSLAEDTIQG+P+S+YVSINSDTGVLYAL SFDYEQ R+LQ++VTA DSG PP
Sbjct: 482 EDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPP 541

Query: 542 LSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
           LSSN+SL LFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 542 LSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQN 601

Query: 602 AWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
           AWLSY L KASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 602 AWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661

Query: 662 VAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHS 721
           VA+ADSIP++LADLGSL+        DLTLYLVVAVA VSCVFL FV+ LLALRLR WH 
Sbjct: 662 VAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHK 721

Query: 722 SHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLIS 781
           S LL+A+  GLA VPTSHFVG+DGV+AFLQTYS E SLTADSRKSHLIFPQPNY D LIS
Sbjct: 722 SRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLIS 781

Query: 782 QQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 841
           Q+SCEKN+ L  SVD +   E+ P + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 782 QESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 841

Query: 842 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 901
           QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 842 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 901

Query: 902 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1342 bits (3473), Expect = 0.0
 Identities = 688/932 (73%), Positives = 769/932 (82%), Gaps = 1/932 (0%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MA+P +    G L+L   LLG L E  + QIRYS+PEE +KG  VGNI+KDL LEP+ELA
Sbjct: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           ER VRIVSRGRTQLF+LNPRSG+LVTAGRIDREELCAQSP C+VNF +LVE+++K+YG+E
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           +E+ DIND+ P+F+ E L+VK+NE A  G R  LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +V +G +G   PELVLE+ LDRE+ T H L+LTA DGG+P  S T  I VTVLD NDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           +F    Y V V EN+P GT LL  TA+D DEGINGK+ Y F    EK S  FQL+ N GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           IST +SLDYEE  FY ME+ A+DGG L    KV+++V+DVNDN PEV +TSL S + ED 
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
             GTVI LF+ HD DSG+NG++ CSI  NL F LE S ++YY LLT + LDRE+ S+YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           T+T  D GTPPLSTE HI L+V D+NDNPP F QASYS  + ENN RG SIFSV A+DPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           S +N+RV YSLAEDT QG+PLS+YVSINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+AD IPDILADLGS++ P D E  DLTLYLVVAVA VSCVFL FVI LL LRLR WH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A    LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780

Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
           S++SCEK+EPL +S D     ++   V QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839

Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899

Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1333 bits (3451), Expect = 0.0
 Identities = 687/932 (73%), Positives = 766/932 (82%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MA P +   R   VLL +LLG LW A A+QIRYS+PEE EKG  VGNI KDL LEP+ELA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           E  VRIVSRGR QLFSLNPR+G+LVTAGRIDREELCAQSPRCLV+F +LVED++ LY +E
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           +E+ DIND+ P+F  E LEVKI E A P +R+PL E  DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +VQ+  +G   PELVLE  LDRE    + LVLTA DGG+P RSS  +I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           +F Q +YRV V EN+P GT +L  TA+D DEG++G+V Y F KI EK S +F LN  TGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           IST+ +LDYE+ SFYE+ ++A DG GL+   KVLI++ DVNDN PEV +TS    + E A
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
           P GTVI LF   DRDSG NG V CSI  +L F LE S  +YYRL+T   LDRE+   YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           TVTATD+GTPPLSTE  I+L V D NDNPP F  +SYSVY+ ENN RG SIFSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
            ++N++V YSLAEDT+QG+PLS+YVSINSDTG+LYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+AD IPDILADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLALRL+ WH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A+  GLA +P SHFVGV+GVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
           +Q+S EK+EPL ++ D      +   + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840

Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900

Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1333 bits (3450), Expect = 0.0
 Identities = 681/920 (74%), Positives = 758/920 (82%)

Query: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
           L LLC+LLG L E  + QIRYSV EE +KG  VGNI+ DL LEPRELAER VRIVSRGRT
Sbjct: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72

Query: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
           QLFSLNP+SG+LVTA RIDREELCAQ P CLV   +LVED++K++ +EIE+ DIND+AP 
Sbjct: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132

Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
           F  E LE+KI E+ VPG R+P+  A DPDVG+NSLQ+Y+LSPN +FSL V +   GA  P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192

Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
           ELVLERALDRE+   H LVL ASDGG+P  S  + I V VLD NDN P+F Q  YRV V 
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252

Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
           ENVP GT LLT  A+D DEG N +V+Y   K+  K + +F LN  +GE+S  KSLDYE+ 
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312

Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
            FYE++I+A+DG GL    K+L++V DVNDN PE+TITSL S V E+   G  I L + H
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372

Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
           DRDSG+NGQV   +  NL F LE S + YYRL+TA  LDRE+ SEYNI++ A+D G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432

Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
           STE HITL V DINDNPP F   SYS Y+PENN RG SIFSV A DPDSN N+R+ Y+L 
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492

Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
           EDT+QG+PLS++VSINS+TGVLYAL SFDYEQFRDL++ VTASDSG+PPLSSNVSL LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD IPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
           ADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+  GL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732

Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
           A  P SHFVG DGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK+EPL 
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792

Query: 793 VSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
           ++ D      D+ L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852

Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
           LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912

Query: 913 GKAPAGGNGNKKKSGKKEKK 932
           GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score = 1325 bits (3428), Expect = 0.0
 Identities = 667/922 (72%), Positives = 764/922 (82%), Gaps = 2/922 (0%)

Query: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
           L+LLC  LG L   RA QIRYSVPEETEKG  VGNISKDL LEPRELA+R VRIVSRG+T
Sbjct: 14  LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73

Query: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
           QLF++NPRSG+L+TAGRIDREELC     C +N ++LVED +K+YG+E+E+ DIND+AP 
Sbjct: 74  QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133

Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
           FQ + +E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL ++   +GA NP
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193

Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
           ELVLE +LDRE+  AH L+LTA DGG+P R   V I V VLD ND+ P+F Q +YRV V 
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253

Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
           EN+  GT +L   A+D DEGING+V Y F  +  K S +FQL+  TGE+    SLD+E+ 
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313

Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
            FYEMEIQ +DGGGL   T +LI+V DVNDN PE+TITS  + + E++P GTVI L N  
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373

Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
           D+DSG+NGQV C I  +L F LE +  +YY+L+T+++LDRE    YNIT+TATD+G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433

Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
           S E H+ L V D NDNPP F  +SYS Y+PENN RG SIFSV A DPDS +N+ V YSL 
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493

Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
           +DT+QG PLS+YVSINS+TGVLYAL SFDYEQFRDL+++V A DSG PPLSSNVSL LFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRL KAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
           EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673

Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
           ADLGSL+  A+ E SDL+LYLVVAVA VSC+FL FVI LLALRL  WH S LL+A+  GL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733

Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
           AG+PTSHFVGVDGV+AFLQTYS E SL ADS+KSHLIFPQPNY DTLISQ+SCEK+EPL 
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793

Query: 793 VSVDSKFPIE--DTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
           ++ DS   +   D     QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 794 IAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 853

Query: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
           MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 854 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 913

Query: 911 RDGKAPAGGNGNKKKSGKKEKK 932
           RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 914 RDGKAPAGGNGNKKKSGKKEKK 935


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1305 bits (3376), Expect = 0.0
 Identities = 669/921 (72%), Positives = 747/921 (81%), Gaps = 1/921 (0%)

Query: 12  RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
           RL+LLC  L +L EA A  I YSVPEET+KG  VGNI+KDL L+P+ELA+  VRIVSRGR
Sbjct: 12  RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71

Query: 72  TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
             LF+LNPRSG+L+TA RIDREELCAQS  CLV+F +LVED++KL+ +E+E+ DIND+ P
Sbjct: 72  MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131

Query: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
           +FQ E LE K+NEI  PG R  LP   D DVG+NSLQSYQLS N HFSL+VQ G +G  +
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191

Query: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
           PE+VL+  LDREE   HHL+LTASDGGEP RS T+RI++ V+D NDN P F Q  Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251

Query: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
            ENVP GT LL   A+D DEG NG+V Y F  ++ + + +F+L+  TGEIS  + LD+EE
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311

Query: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
              Y ME+QA+DG GL    KVLI V DVNDN PEVTITS+ + V E+ P GT+I L + 
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371

Query: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
           HD+DSG NG   C I  NL F LE   ++YYRL+T + LDRE  S YNIT+TA D+GTP 
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431

Query: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
           LSTE HI+L VTDINDN P F Q SYS Y+PENN RG SIFSV A+D DSNEN+++ YSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491

Query: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
            EDTIQG+PLS Y+SINSDTGVLYAL SFDYEQFRD+Q++V A DSG PPLSSNVSL LF
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551

Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
           +LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRL KA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611

Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
           SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD I DI
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671

Query: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
           LADLGSL+  A    SDLTLYLVVA A VSCVFL FVI LLA RLR WH S LL+A+  G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731

Query: 732 LAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPL 791
           LA +P SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK   L
Sbjct: 732 LASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFL 791

Query: 792 CVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 851
             +  S    +  P   QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM
Sbjct: 792 S-APQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 850

Query: 852 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 911
           ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR
Sbjct: 851 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 910

Query: 912 DGKAPAGGNGNKKKSGKKEKK 932
           DGKAPAGGNGNKKKSGKKEKK
Sbjct: 911 DGKAPAGGNGNKKKSGKKEKK 931


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1300 bits (3365), Expect = 0.0
 Identities = 667/932 (71%), Positives = 751/932 (80%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MAA  K     +LVLLC LL  LWEARA QIRYSV EE ++G  VGNI+KDL LEP  LA
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           E+ VRIVSRGR+QLF+LNPRSG+LVTA RIDREELCAQS  CL+NF +L+ED++ +Y +E
Sbjct: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           +E+TDIND+AP+F  E LE+KI+E   PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +V+ G +G   PELVLER+LDREE   HHLVL ASDGG+P  S T RI V VLD NDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           VF Q  YR+ + EN   GT +LT TA+D DEG   +V Y   K   + S +F+L   +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           ++  K LDYE+ +F+E++I+A+DG GL    KV+++V DVNDN PE  +TS  S V ED+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
             GT+I LFN HDRDSG+N    CS+ E+L F LE S ++YYRL+T + LDRE+ S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           T+TA D G P LST+ HI LQV DINDN PAFS+ SYS Y+PENN RG S+FSV A+DPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           SN+N+ V YS AEDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY L KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+AD IPDILADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLA RLR WH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A+   L G+ +SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
           SQ+SCEK + L           +     QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840

Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900

Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1230 bits (3182), Expect = 0.0
 Identities = 627/796 (78%), Positives = 682/796 (85%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MAAP     RG L+LLC+LLG LWE    QIRYSVPEET+KG  VGNISKDL L+PR+LA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           +  VRIVSRGRTQLF+LNPRSG+L+TAGRIDREELCAQSPRCL+N   LVED+ KL+G+E
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           IE+ DIND+ PKFQ E LEVKINEIAVPGARYPLPEA+DPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +VQTGDNGAINPELVLERALDREE  AHHLVLTASDGG+P RSSTVRIHVTVLDTNDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           VF   IYRVKVLEN+PPGT LLT TASD DEGINGKVAYKF KINEKQ+ LFQLNENTGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           IS AKSLDYEECSFYEMEIQAED G L G TK+LISVEDVNDNRPEV ITSLFSPV E++
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
             GTVI   + HD+DSGKNGQVVC  ++NL F LE S  +YYRL+T + LDRE  S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           TV A+D GTPPLSTE  I L V DINDNPP F  ASYS Y+ ENN RG SIFS+ A+DPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           S EN++V YS+ EDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSN+SL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+ADSIP++L +LGSL+   D   S LTLYLVVAVA +SCVFL FV  LL LRLR WH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL+ +   L GVP SHFVGV+ V+AFLQTYSQE SLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 SQQSCEKNEPLCVSVD 796
           SQ+ CEKN+ L  SVD
Sbjct: 781 SQEGCEKNDSLLTSVD 796


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score = 1196 bits (3093), Expect = 0.0
 Identities = 613/796 (77%), Positives = 666/796 (83%)

Query: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
           LVLLC   G+ WEA A QI YS+PEE EKG  VGNISKDL L PRELAER VRIVSRGRT
Sbjct: 17  LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76

Query: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
           QLFSLNPRSG+L+TAGRIDREELCAQS RC+V+F +LVEDRVKL+GIEIEVTDIND+APK
Sbjct: 77  QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136

Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
           FQAE+L+VKINE    G R+PLPEAIDPDVGVNSLQSYQLSPN HFSL VQ+  NG   P
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196

Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
           ELVLE +LDREE   HHLVLTASDGG+P RS TV + VTV D NDNAPVF    YRV V 
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256

Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
           EN+P GT LLT TA+D DEG NG+V Y F K+ + Q L FQLN+ TGEI  +++LDYEE 
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316

Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
            FYE+EIQAEDGG      KVLI+VEDVNDN PE+TITSLFSPV ED+P GTV+ L N H
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376

Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
           D DS +NGQV CSI   L F LE S + YYRL+  + LDRE+ S YNITVTATD G+PPL
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436

Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
           STE H  LQV DINDNPP FSQ SY  Y+PENNARG SIFSV A DPDS EN+++IYSLA
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496

Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
           EDTIQG PLS+Y+SINSDTGVLYAL SFDYEQF +LQMQVTASDSG PPLSSNVSL LFV
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
           EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676

Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
           ADLGS + PA+ E SDLTLYLVVAVA VSCVFL FVI LLA RLR WH S LL+A+  GL
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736

Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
            GV  SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEKN+PL 
Sbjct: 737 TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLS 796

Query: 793 VSVDSKFPIEDTPLVP 808
           +  DSKFPIEDTPLVP
Sbjct: 797 LLDDSKFPIEDTPLVP 812


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1100 bits (2844), Expect = 0.0
 Identities = 560/796 (70%), Positives = 641/796 (80%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MAAP       RL+ +C LLG+L E RA QI YSV EE E+G +VGNI+KDL L PRELA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           ER VRIVSRGRTQLF+LNPRSGTLVTAGRIDREELC +SP C+ N ++L+ED VK+  +E
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           +E+ D+ND+ P F  E  E+K+ E   PGAR+PLPEA DPDVGVNSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +VQ+G +G   PELVLERALDREE   HHLVLTA DGG+P RS T RI + ++DTNDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           VF Q  Y V V ENVP GT LLT  A+D DEG NG V Y F K+ +K S LFQLN  +G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           I+    LDYE+  FY+++++A DG GL+  +KVL++V D NDN PEVT+TSL S V+E +
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
             GTVI LFN HD DSG NG V CSI +NL FTLE +  +YYRLLT + LDRE+ SEYNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           TVTATD+GTPPLSTE HI+LQV DINDNPP F  ASYS Y+PENN RG SI S+ A DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           S +N+R+ YSLAEDT QG+PLS+YVSINS+TG+LYALCSFDYEQFRDLQ+ +TASDSG P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY L K+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+ADSIPD+LADLGSL+  AD + S LTLYLVVAVA VSCVFL FV  LLAL+LR WH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL A    LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 SQQSCEKNEPLCVSVD 796
           S++SCEK+EPL ++ D
Sbjct: 781 SRESCEKSEPLLITQD 796


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1095 bits (2832), Expect = 0.0
 Identities = 561/795 (70%), Positives = 643/795 (80%)

Query: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
           LVLL  LLG LWE   +QIRYSVPEE EKG  VG+IS+DL LEPRELAER VRI+ RGRT
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
           QLF+LNPRSG+LVTAGRIDREELC  + +C +N  +L+ED+VK+YG+E+EV DIND+AP 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
           F+   LE+KI+E A    R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+  P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
           ELVL+RALDREE  AHHLVLTASDGG+P R+ T RI V VLD NDNAP FAQ  YR  V 
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
           EN+  GT LL   A+D DEG+N +V Y F  +++K + +F+L+ N+G IST   LD+EE 
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
            FY+ME+QA D  G     KVLI+V DVNDN PEV +TSL S V E++P+GT+I L N +
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
           D+DS +NGQV+C IQ NL F LE S  +YY L+T  +LDRE+   YNITVTATDRGTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
           STE HI+L V D NDNPP F QASYS Y+PENN RG S+ SV A+DPD  EN+++ YSLA
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
           E+TIQG+ LS+YVSINSDTGVLYAL SFDYEQFRDLQ++V A D+G PPLSSNVSL LFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
           ADLGSL+ PA+ E SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+  GL
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
            G P SHFVGVDGV+AFLQTYS E SLT DSRKSHLIFPQPNYAD L+SQ+S EK+EPL 
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792

Query: 793 VSVDSKFPIEDTPLV 807
           +S DS F  +   L+
Sbjct: 793 LSGDSVFSKDSHGLI 807


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score = 1093 bits (2827), Expect = 0.0
 Identities = 562/794 (70%), Positives = 641/794 (80%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MA+P +    G L+L   LLG L E  + QIRYS+PEE +KG  VGNI+KDL LEP+ELA
Sbjct: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           ER VRIVSRGRTQLF+LNPRSG+LVTAGRIDREELCAQSP C+VNF +LVE+++K+YG+E
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           +E+ DIND+ P+F+ E L+VK+NE A  G R  LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +V +G +G   PELVLE+ LDRE+ T H L+LTA DGG+P  S T  I VTVLD NDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           +F    Y V V EN+P GT LL  TA+D DEGINGK+ Y F    EK S  FQL+ N GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           IST +SLDYEE  FY ME+ A+DGG L    KV+++V+DVNDN PEV +TSL S + ED 
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
             GTVI LF+ HD DSG+NG++ CSI  NL F LE S ++YY LLT + LDRE+ S+YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           T+T  D GTPPLSTE HI L+V D+NDNPP F QASYS  + ENN RG SIFSV A+DPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           S +N+RV YSLAEDT QG+PLS+YVSINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+AD IPDILADLGS++ P D E  DLTLYLVVAVA VSCVFL FVI LL LRLR WH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A    LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780

Query: 781 SQQSCEKNEPLCVS 794
           S++SCEK+EPL +S
Sbjct: 781 SEESCEKSEPLLMS 794


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score = 1091 bits (2821), Expect = 0.0
 Identities = 567/810 (70%), Positives = 643/810 (79%), Gaps = 1/810 (0%)

Query: 2   AAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAE 61
           A P     RG   LL  LLG  WEA A +I YSV EET+KG  VG+I+KDL LEPRELAE
Sbjct: 3   AQPRGGDYRG-FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAE 61

Query: 62  RRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEI 121
           R VRI+SRGRTQLF+LN RSG+LVTAGRIDREE+CAQS RCLVNF +L+ED++ LY I++
Sbjct: 62  RGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDV 121

Query: 122 EVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLN 181
           E+ DIND+ P+F  E + VKI E   PG R+PL EA DPDVG NSLQSYQLSPN HFSL 
Sbjct: 122 EIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLA 181

Query: 182 VQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPV 241
           VQ+GD+    PELVLER LDREE   HHLVLTASDGG+P RSST  I VTV+D ND+ PV
Sbjct: 182 VQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPV 241

Query: 242 FAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEI 301
           F+   Y+V V ENVP GT LLT  A DLDEG+NG+V Y F KI  K   +F LN  TGEI
Sbjct: 242 FSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEI 301

Query: 302 STAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAP 361
           ST + LDYEE +FYEME+QA+DG G     KVLI+V DVNDN PEVT+TSL S + ED P
Sbjct: 302 STLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTP 361

Query: 362 QGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNIT 421
            GTVI LF   DRDSGKNG+V C+I ENL F LE S ++YYRL+T + LDRE  S YNIT
Sbjct: 362 LGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNIT 421

Query: 422 VTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDS 481
           + ATD GTPPLS E HI +QV D NDNPP F  +SYSVY+ ENN RG SIF V A D DS
Sbjct: 422 LKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDS 481

Query: 482 NENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPP 541
            +N+++ YSLAEDTIQG+P+S+YVSINSDTGVLYAL SFDYEQ R+LQ++VTA DSG PP
Sbjct: 482 EDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPP 541

Query: 542 LSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
           LSSN+SL LFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 542 LSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQN 601

Query: 602 AWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
           AWLSY L KASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 602 AWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661

Query: 662 VAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHS 721
           VA+ADSIP++LADLGSL+        DLTLYLVVAVA VSCVFL FV+ LLALRLR WH 
Sbjct: 662 VAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHK 721

Query: 722 SHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLIS 781
           S LL+A+  GLA VPTSHFVG+DGV+AFLQTYS E SLTADSRKSHLIFPQPNY D LIS
Sbjct: 722 SRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLIS 781

Query: 782 QQSCEKNEPLCVSVDSKFPIEDTPLVPQAP 811
           Q+SCEKN+ L  SVD +   E+ P +  +P
Sbjct: 782 QESCEKNDSLLTSVDFQECKENLPSIQVSP 811


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1085 bits (2807), Expect = 0.0
 Identities = 563/796 (70%), Positives = 640/796 (80%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MA P +   R   VLL +LLG LW A A+QIRYS+PEE EKG  VGNI KDL LEP+ELA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           E  VRIVSRGR QLFSLNPR+G+LVTAGRIDREELCAQSPRCLV+F +LVED++ LY +E
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           +E+ DIND+ P+F  E LEVKI E A P +R+PL E  DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +VQ+  +G   PELVLE  LDRE    + LVLTA DGG+P RSS  +I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           +F Q +YRV V EN+P GT +L  TA+D DEG++G+V Y F KI EK S +F LN  TGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           IST+ +LDYE+ SFYE+ ++A DG GL+   KVLI++ DVNDN PEV +TS    + E A
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
           P GTVI LF   DRDSG NG V CSI  +L F LE S  +YYRL+T   LDRE+   YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           TVTATD+GTPPLSTE  I+L V D NDNPP F  +SYSVY+ ENN RG SIFSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
            ++N++V YSLAEDT+QG+PLS+YVSINSDTG+LYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+AD IPDILADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLALRL+ WH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A+  GLA +P SHFVGV+GVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQQSCEKNEPLCVSVD 796
           +Q+S EK+EPL ++ D
Sbjct: 781 NQESYEKSEPLLITQD 796


>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 829

 Score = 1081 bits (2795), Expect = 0.0
 Identities = 555/784 (70%), Positives = 630/784 (80%)

Query: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
           L LLC+LLG L E  + QIRYSV EE +KG  VGNI+ DL LEPRELAER VRIVSRGRT
Sbjct: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72

Query: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
           QLFSLNP+SG+LVTA RIDREELCAQ P CLV   +LVED++K++ +EIE+ DIND+AP 
Sbjct: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132

Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
           F  E LE+KI E+ VPG R+P+  A DPDVG+NSLQ+Y+LSPN +FSL V +   GA  P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192

Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
           ELVLERALDRE+   H LVL ASDGG+P  S  + I V VLD NDN P+F Q  YRV V 
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252

Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
           ENVP GT LLT  A+D DEG N +V+Y   K+  K + +F LN  +GE+S  KSLDYE+ 
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312

Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
            FYE++I+A+DG GL    K+L++V DVNDN PE+TITSL S V E+   G  I L + H
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372

Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
           DRDSG+NGQV   +  NL F LE S + YYRL+TA  LDRE+ SEYNI++ A+D G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432

Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
           STE HITL V DINDNPP F   SYS Y+PENN RG SIFSV A DPDSN N+R+ Y+L 
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492

Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
           EDT+QG+PLS++VSINS+TGVLYAL SFDYEQFRDL++ VTASDSG+PPLSSNVSL LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD IPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
           ADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+  GL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732

Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
           A  P SHFVG DGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK+EPL 
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792

Query: 793 VSVD 796
           ++ D
Sbjct: 793 ITQD 796


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score = 1078 bits (2787), Expect = 0.0
 Identities = 542/785 (69%), Positives = 638/785 (81%)

Query: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
           L+LLC  LG L   RA QIRYSVPEETEKG  VGNISKDL LEPRELA+R VRIVSRG+T
Sbjct: 14  LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73

Query: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
           QLF++NPRSG+L+TAGRIDREELC     C +N ++LVED +K+YG+E+E+ DIND+AP 
Sbjct: 74  QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133

Query: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
           FQ + +E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL ++   +GA NP
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193

Query: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
           ELVLE +LDRE+  AH L+LTA DGG+P R   V I V VLD ND+ P+F Q +YRV V 
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253

Query: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
           EN+  GT +L   A+D DEGING+V Y F  +  K S +FQL+  TGE+    SLD+E+ 
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313

Query: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
            FYEMEIQ +DGGGL   T +LI+V DVNDN PE+TITS  + + E++P GTVI L N  
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373

Query: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
           D+DSG+NGQV C I  +L F LE +  +YY+L+T+++LDRE    YNIT+TATD+G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433

Query: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
           S E H+ L V D NDNPP F  +SYS Y+PENN RG SIFSV A DPDS +N+ V YSL 
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493

Query: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
           +DT+QG PLS+YVSINS+TGVLYAL SFDYEQFRDL+++V A DSG PPLSSNVSL LFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRL KAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
           EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673

Query: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
           ADLGSL+  A+ E SDL+LYLVVAVA VSC+FL FVI LLALRL  WH S LL+A+  GL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733

Query: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
           AG+PTSHFVGVDGV+AFLQTYS E SL ADS+KSHLIFPQPNY DTLISQ+SCEK+EPL 
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793

Query: 793 VSVDS 797
           ++ DS
Sbjct: 794 IAEDS 798


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1056 bits (2732), Expect = 0.0
 Identities = 546/793 (68%), Positives = 624/793 (78%), Gaps = 4/793 (0%)

Query: 12  RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
           RL+LLC  L +L EA A  I YSVPEET+KG  VGNI+KDL L+P+ELA+  VRIVSRGR
Sbjct: 12  RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71

Query: 72  TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
             LF+LNPRSG+L+TA RIDREELCAQS  CLV+F +LVED++KL+ +E+E+ DIND+ P
Sbjct: 72  MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131

Query: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
           +FQ E LE K+NEI  PG R  LP   D DVG+NSLQSYQLS N HFSL+VQ G +G  +
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191

Query: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
           PE+VL+  LDREE   HHL+LTASDGGEP RS T+RI++ V+D NDN P F Q  Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251

Query: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
            ENVP GT LL   A+D DEG NG+V Y F  ++ + + +F+L+  TGEIS  + LD+EE
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311

Query: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
              Y ME+QA+DG GL    KVLI V DVNDN PEVTITS+ + V E+ P GT+I L + 
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371

Query: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
           HD+DSG NG   C I  NL F LE   ++YYRL+T + LDRE  S YNIT+TA D+GTP 
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431

Query: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
           LSTE HI+L VTDINDN P F Q SYS Y+PENN RG SIFSV A+D DSNEN+++ YSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491

Query: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
            EDTIQG+PLS Y+SINSDTGVLYAL SFDYEQFRD+Q++V A DSG PPLSSNVSL LF
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551

Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
           +LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRL KA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611

Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
           SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD I DI
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671

Query: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
           LADLGSL+  A    SDLTLYLVVA A VSCVFL FVI LLA RLR WH S LL+A+  G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731

Query: 732 LAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEK---- 787
           LA +P SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK    
Sbjct: 732 LASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFL 791

Query: 788 NEPLCVSVDSKFP 800
           + P  +  D K P
Sbjct: 792 SAPQSLLEDKKEP 804


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1053 bits (2723), Expect = 0.0
 Identities = 542/789 (68%), Positives = 625/789 (79%)

Query: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           MAA  K     +LVLLC LL  LWEARA QIRYSV EE ++G  VGNI+KDL LEP  LA
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
           E+ VRIVSRGR+QLF+LNPRSG+LVTA RIDREELCAQS  CL+NF +L+ED++ +Y +E
Sbjct: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           +E+TDIND+AP+F  E LE+KI+E   PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
           +V+ G +G   PELVLER+LDREE   HHLVL ASDGG+P  S T RI V VLD NDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           VF Q  YR+ + EN   GT +LT TA+D DEG   +V Y   K   + S +F+L   +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           ++  K LDYE+ +F+E++I+A+DG GL    KV+++V DVNDN PE  +TS  S V ED+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
             GT+I LFN HDRDSG+N    CS+ E+L F LE S ++YYRL+T + LDRE+ S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           T+TA D G P LST+ HI LQV DINDN PAFS+ SYS Y+PENN RG S+FSV A+DPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
           SN+N+ V YS AEDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY L KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
           TVA+AD IPDILADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLA RLR WH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A+   L G+ +SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQQSCEKNE 789
           SQ+SCEK +
Sbjct: 781 SQESCEKKD 789


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  926 bits (2393), Expect = 0.0
 Identities = 490/941 (52%), Positives = 636/941 (67%), Gaps = 22/941 (2%)

Query: 2   AAPTKCQL-RGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
           A+  +C L R   VLL  LL +   A   QIRYS+PEE  K  +VGN++KDL L  R+L 
Sbjct: 3   ASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLP 62

Query: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
            R++R+ +    + F++NP SG L+ + RIDRE++C + P C+++F  + E+ + ++ I 
Sbjct: 63  ARKLRVSAE--KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIA 120

Query: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
           + V DIND+ P F+   + +KI E   PG  +PL  A+D DVG NSLQ Y L+ N +F L
Sbjct: 121 VIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDL 180

Query: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
             +   +G   PEL+L+ +LDREE + H LVLTA DGG+P +S T +I + V D NDN P
Sbjct: 181 AEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPP 240

Query: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
           VF+Q +YRV + E+VPPG ++L  TA+D DEGIN ++ Y F  ++E+    F LNE TGE
Sbjct: 241 VFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGE 300

Query: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
           I+T   LD+E  S Y + I+A+D G L     + + + D ND  PEV +TS+ +P+ ED+
Sbjct: 301 ITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDS 360

Query: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
           P GTVI L    DRDSG+NG+V C +  N  F L++S ++YY+L+T   LDRE+  EYN+
Sbjct: 361 PPGTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNL 420

Query: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
           T+TATD G PPLS+ I +TL ++D+NDN P F Q SY V++ ENN  G SI  + A DPD
Sbjct: 421 TITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPD 480

Query: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
              + +V YS+    ++   + +YVS+++ +GV++A  +FD+EQ R  ++ + A D GSP
Sbjct: 481 LGPSGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSP 540

Query: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
            LS+NVSLR+ V D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG 
Sbjct: 541 ALSANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGH 600

Query: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY + +ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL
Sbjct: 601 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATL 660

Query: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
            +  ADS+ ++L DL   + P+D +A  L  YLVVA+A++S +F   VI  ++LRLR   
Sbjct: 661 HLIFADSLQEVLPDLSDRREPSDPQAK-LQFYLVVALALISVLFFLAVILAISLRLRLSS 719

Query: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQ-----EFSLTADSRKSHLIFPQPNY 775
            S        GL+  P             L  YS+      ++L   S+ +   F   N 
Sbjct: 720 RSDAWDCFQPGLSSKPGP---------GVLPNYSEGTLPYSYNLCVASQSAKTEFNFLNI 770

Query: 776 ADTLISQQS--CEKN--EPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQN 831
              L+  Q   C+    E       +  P     ++ QAPPNTDWRFSQAQRPGTSGSQN
Sbjct: 771 TPELVPAQDLVCDNASWEQNTNHGAAGVPFASDTILKQAPPNTDWRFSQAQRPGTSGSQN 830

Query: 832 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 891
           GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY
Sbjct: 831 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 890

Query: 892 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 891 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931


>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  922 bits (2384), Expect = 0.0
 Identities = 492/929 (52%), Positives = 628/929 (67%), Gaps = 31/929 (3%)

Query: 14  VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73
           VL   LL +   A   QIRY +PEE  KG +VGN++ DL    +EL  R++R+ S     
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73

Query: 74  LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133
            F+++  SG L+ + R+DREE+C + P C + F+ + E+ +  Y + +E+ DIND  PKF
Sbjct: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133

Query: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193
              S E++I+E A PG R+ L  A D D+G+NSLQ Y+LS N  FSL ++   +G+  PE
Sbjct: 134 TQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPE 193

Query: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253
           L LE+ LDRE+ + H LVLTA DGG P  S T  + + V D NDN PVF + +YRV + E
Sbjct: 194 LALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRE 253

Query: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313
           NVPPGT +L  +A+D DEGIN ++ Y F++  +    +F LN  +GEI+T K LD+EE  
Sbjct: 254 NVPPGTTVLQVSATDQDEGINSEITYSFYRTGQ----IFSLNSKSGEITTQKKLDFEETK 309

Query: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373
            Y M ++  DGGGL     V I+++D NDN PEVT  SL   + E+A  GT+I L   HD
Sbjct: 310 EYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHD 369

Query: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433
           +DSG+NG+V C +Q  + F + +S ++ Y+L+T   LDRE+  EYN+T+TATDRG PPLS
Sbjct: 370 QDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLS 429

Query: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493
           + I + L + D+NDN P F QASY V +PENN  G SI  V A D D   N +V YS+  
Sbjct: 430 SSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMA 489

Query: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553
             ++   L++YVS+++ +GV++A  +FDYEQ R  ++ + A D GSP LS+NVSLR+ V 
Sbjct: 490 SDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVG 549

Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613
           D+NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 550 DRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673
           PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ ++L 
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 669

Query: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGLA 733
           D+    +P+D +A +L  YLVVA+A++S +FL  VI  +ALRLR   S         GL 
Sbjct: 670 DITDRPVPSDPQA-ELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLC 728

Query: 734 -----GVPTSHFVGVDGVRAFLQTYSQEFSL-TADSRKSHLIF----PQPNYADTLISQQ 783
                 VP ++  G         T    ++L  A + K+   F     Q +    ++   
Sbjct: 729 VKSGPVVPPNYSQG---------TLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGD 779

Query: 784 SCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 843
           S     PLC S +S    E      QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF
Sbjct: 780 SSGALFPLCNSSESTSHPE-----LQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 834

Query: 844 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 903
           DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT
Sbjct: 835 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 894

Query: 904 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           LTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 895 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923


>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score =  920 bits (2378), Expect = 0.0
 Identities = 482/928 (51%), Positives = 632/928 (68%), Gaps = 19/928 (2%)

Query: 12  RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
           R VL   LL + +      IRYS+PEE  KG +VGN++KDL L   +++ R +R+ +   
Sbjct: 14  RQVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRVSAEKL 73

Query: 72  TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
              FS++ +SG L+   RIDRE++C +  RC +  + +VE+ + ++ + + + D+ND AP
Sbjct: 74  H--FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAP 131

Query: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
           +F+ + + ++I+E    G    L  A DPD+ +NSL  YQLSPN +FSL  +   +G   
Sbjct: 132 QFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKY 191

Query: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
           PELVL++ LDRE  +AHHLVLTA DGG+P RS T +I + V+D NDN PVF+Q +YRV +
Sbjct: 192 PELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSL 251

Query: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
            E+VPPGT +L   A+D DEGIN ++ Y F+ + +K   +F L+  TG I T + LD+EE
Sbjct: 252 REDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEE 311

Query: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
              Y + I+A+D G L    KV++ V D NDN PE+ ITSL   + ED+P G V+ LF  
Sbjct: 312 VERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKT 371

Query: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
            D+DSG+NG+V CS+   + F + +S  +YY+L+T + LDRE+  EYN+T+ ATDRG PP
Sbjct: 372 RDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPP 431

Query: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
           LS+   ITL +TD+NDN P F Q++Y V++PENN  G SI  V A DPD   N RV YSL
Sbjct: 432 LSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSL 491

Query: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
               ++   LS+YVS+++ +GV++A  +FD+EQ R  ++ + A D GSP LS+NVSLR+ 
Sbjct: 492 IASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVL 551

Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
           V D+NDNAP +LYPAL  DGS   +  PR+A+PGYLVTKVVAVD DSG NAWLSY + +A
Sbjct: 552 VGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQA 611

Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
           SEPGLFS+GL TGEVR  RAL D+D+++Q L+VAV+D GQPPLSAT TL +  ADS+ ++
Sbjct: 612 SEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEV 671

Query: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
           L D      P+D +A ++  YLVVA+A++S +FL  VI  +ALRLR   S        D 
Sbjct: 672 LPDFSDHPTPSDSQA-EMQFYLVVALALISVLFLLAVILAIALRLRQSFSP----TAGDC 726

Query: 732 LAGVPTSHF--VGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTL----ISQQSC 785
              V  S    VG          Y+  F +  D        P+ N+  ++     +Q + 
Sbjct: 727 FESVLCSKSGPVGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTSVDHCPATQDNL 781

Query: 786 EKNEPLCVSVDSKFPIEDTPLV-PQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 844
            K+  L  S+ +     D  ++  QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD
Sbjct: 782 NKDSMLLASILTPSVEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 841

Query: 845 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 904
           TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL
Sbjct: 842 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 901

Query: 905 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           TNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 929


>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  911 bits (2355), Expect = 0.0
 Identities = 492/929 (52%), Positives = 630/929 (67%), Gaps = 31/929 (3%)

Query: 14  VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73
           VL   LL +   A   QIRY +PEE  KG +VGN++ DL    +EL  R++R+ S     
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73

Query: 74  LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133
            F+++  SG L+ + R+DREE+C + P C + F+ + E+ +  Y + +E+ DIND  PKF
Sbjct: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133

Query: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193
              S E++I+E A PG R+ L  A D D+G N+LQ+YQLSP+ HFSL  +   +G+  PE
Sbjct: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193

Query: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253
           +VL+  LDRE+  ++HL LTA D G P  SST +IHV V D NDNAPVF+Q +YRV + E
Sbjct: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253

Query: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313
           NV PGT +L  TA+D DEG+N ++ + F + +  Q   F LN NTGEI+   +LD+EE  
Sbjct: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEAS--QITQFDLNSNTGEITVLNTLDFEEVK 311

Query: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373
            Y + ++A DGGG+     V + V D NDN PEV   SL + + EDA  GT I L    D
Sbjct: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371

Query: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433
           +DS  NG+V C ++ ++ F +  S  + Y+L+T  +LDRE+  EYNITVTATDRG PPLS
Sbjct: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431

Query: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493
           +   ITL + D+NDN P FSQ+SY V++ ENN  G SI  V A DPD   N +V Y +  
Sbjct: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491

Query: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553
             ++   LS+YVSI++++GV++A  +FD+EQ R  ++ + A D GSP LS+NVSLR+ V 
Sbjct: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551

Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613
           D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673
           PGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  ADS+ ++L 
Sbjct: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671

Query: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL- 732
           D+     P+DL+A +L  YLVVA+A++S +FL  +I  +ALRLR   S         GL 
Sbjct: 672 DITDRPDPSDLQA-ELQFYLVVALALISVLFLVAMILAIALRLRRSSSPASWSCFQPGLC 730

Query: 733 ----AGVPTSHFVGVDGVRAFLQTYSQEFSL-TADSRKSHLIFPQPNYADTLISQQSCEK 787
               + VP ++  G         T    ++L  A + K+   F +        S+Q    
Sbjct: 731 VKSESVVPPNYSEG---------TLPYSYNLCVAHTGKTEFNFLK-------CSEQLSSG 774

Query: 788 NEPLC-VSVDSKFPI---EDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 843
            + LC  S  + FP+    +     QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF
Sbjct: 775 QDILCGDSSGALFPLCNSSELTSHQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 834

Query: 844 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 903
           DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT
Sbjct: 835 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 894

Query: 904 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           LTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 895 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923


>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 927

 Score =  908 bits (2346), Expect = 0.0
 Identities = 486/928 (52%), Positives = 627/928 (67%), Gaps = 23/928 (2%)

Query: 14  VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73
           VL   LL +   A + QIRY++PEE   G  VG ++KDL L  REL  R++R+ +     
Sbjct: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70

Query: 74  LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133
            F+++  SG L+  GRIDRE++C +   C + F+ + E+ + ++ + + + DIND+AP+F
Sbjct: 71  YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130

Query: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193
            A+ ++++I E A+PG ++ L  A D DV  NSL+ Y ++PN +FSL+ +   +G+  P 
Sbjct: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190

Query: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253
           L+LE+ LDRE  ++H L+LTA DGG+P  S T  I + V D NDNAPVF+Q +YRV + E
Sbjct: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250

Query: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313
           NVP GT +L   A+D DEGIN ++ Y F       SL F LN NTG+I+T  +LD+EE S
Sbjct: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSL-FNLNPNTGDITTNGTLDFEETS 309

Query: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373
            Y + ++A+DGG       V I + D NDN PEVT  S  + + ED+  GTVI L    D
Sbjct: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369

Query: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433
           +DSG+NG V C  QE + F LE++ ++YY+L+ A  L+RE+ ++YN+T+ ATD+G P LS
Sbjct: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429

Query: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493
           +   ITL ++DINDN P F QASY V++ ENN  G SI  V A DPD   N RV YS+  
Sbjct: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489

Query: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553
             ++   L +YVS++  +GV++A  +FD+EQ R  ++ + A D GSP LS+NVSLR+ V 
Sbjct: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549

Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613
           D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673
           PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ ++L 
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669

Query: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGLA 733
           DL     P+D + ++L  YLVVA+A++S +FL  VI  +ALRLR   S         GL 
Sbjct: 670 DLSDRPEPSDPQ-TELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLC 728

Query: 734 -----GVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKN 788
                GVP +H  G         T    ++L   S  +   F   N    +   Q    +
Sbjct: 729 SKSGPGVPPNHSEG---------TLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCD 779

Query: 789 EP---LCVS-VDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 844
           +P   +C S  D K   + +    QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD
Sbjct: 780 DPSMVVCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 839

Query: 845 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 904
           TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL
Sbjct: 840 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 899

Query: 905 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           TNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 927


>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score =  906 bits (2342), Expect = 0.0
 Identities = 490/934 (52%), Positives = 634/934 (67%), Gaps = 31/934 (3%)

Query: 12  RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
           R +L   LL +L +  +  IRY++PEE ++G +VGN++KDL     +L  R +R+++  +
Sbjct: 14  RRMLFLFLLSLLDQVLSEPIRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVIAEKK 73

Query: 72  TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
              F+++P +G L+ + RIDREE+C +   C++ F+++ E  +  + + + + DIND+ P
Sbjct: 74  --FFTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVTVLIQDINDNPP 131

Query: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
            F     E++I+E+A+ GA + L  A DPDVGVNSLQ Y LSP+ HFSL  +   +G+  
Sbjct: 132 TFSQNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSLIQKENLDGSRY 191

Query: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
           PELVL+  LDREE   HHLVLTA DGGEP RS T +I V V D NDN PVF Q +YRV V
Sbjct: 192 PELVLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNV 251

Query: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
            EN+P G+ +L   A D+DEGIN ++ Y F  I ++   LF+L+  TGE++T   LD+EE
Sbjct: 252 AENLPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEE 311

Query: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
              Y + ++A+DGG    + KV I + D NDN PE+T+ S    ++EDA  GT + L   
Sbjct: 312 RDSYTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKT 371

Query: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
           HD DSG NG+++C ++ N  F +    ++ YRL+T   LDRE+  EYN+T+TATD+G PP
Sbjct: 372 HDLDSGFNGEILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGNPP 431

Query: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
           LS+   ITL + D+NDN P F QASY+V++ ENN  G SI  V A DPD   N  V Y +
Sbjct: 432 LSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSYYI 491

Query: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
               ++   LS+YVS+++ +GV++A  +FD+EQ R  ++ + A D GSP LS+NVSLR+ 
Sbjct: 492 VASDLEPRELSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLRVL 551

Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
           V D+NDNAP +LYPAL  +GS   ++ PRSAEPGYLVTKVVAVD DSG NAWLSY + +A
Sbjct: 552 VDDRNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIVQA 611

Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
           SEPGLFS+GL TGEVRTAR L DR+A +Q L+V V+D GQ PLSATV L +  ADS+ +I
Sbjct: 612 SEPGLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQEI 671

Query: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
             DL     P+D +A +L  +LVVA+A++S +FL  VI  ++LRLR   SS   R  ++G
Sbjct: 672 QPDLSDRPTPSDPQA-ELQFHLVVALALISVLFLLAVILAISLRLR--CSS---RPATEG 725

Query: 732 LAGVPTSHFVGVDGVRAFLQTYSQ-----EFSLTADSRKSHLIFPQPNYADTLISQQSCE 786
               P   F  V GV   L TYS+      ++  A S  S+  F   N     I  ++  
Sbjct: 726 YF-QPGVCFKTVPGV---LPTYSERTLPYSYNPCAASHSSNTEFKFLN-----IKAENAA 776

Query: 787 KNEPLCVSVDSKFPIEDTPLVP--------QAPPNTDWRFSQAQRPGTSGSQNGDDTGTW 838
             + LC    S F   D P +P        QAPPNTDWRFSQAQRPGTSGSQNGDDTGTW
Sbjct: 777 PQDLLCDEA-SWFESNDNPEMPSNSGNLQKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTW 835

Query: 839 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 898
           PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP
Sbjct: 836 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 895

Query: 899 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
           GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 896 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 929


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.132    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,593,770
Number of Sequences: 37866
Number of extensions: 1615323
Number of successful extensions: 10288
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3150
Number of HSP's gapped (non-prelim): 657
length of query: 932
length of database: 18,247,518
effective HSP length: 112
effective length of query: 820
effective length of database: 14,006,526
effective search space: 11485351320
effective search space used: 11485351320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.