BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|110825988 TAR RNA binding protein 1 [Homo sapiens] (1621 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|110825988 TAR RNA binding protein 1 [Homo sapiens] 3227 0.0 gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 40 0.014 gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 40 0.014 gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 39 0.053 gi|239751065 PREDICTED: hypothetical protein XP_002347692 [Homo ... 38 0.091 gi|8393009 chromosome 11 open reading frame2 [Homo sapiens] 38 0.091 gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 37 0.20 gi|147903292 nuclear localized factor 1 [Homo sapiens] 37 0.20 gi|4557439 cyclin-dependent kinase 3 [Homo sapiens] 36 0.27 gi|223634006 hypothetical protein LOC441869 [Homo sapiens] 35 0.45 gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 35 0.59 gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 34 1.0 gi|169211642 PREDICTED: hypothetical protein [Homo sapiens] 34 1.0 gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo s... 34 1.0 gi|54873602 hypothetical protein LOC220382 [Homo sapiens] 34 1.0 gi|239756545 PREDICTED: hypothetical protein XP_002344931 [Homo ... 34 1.3 gi|239745511 PREDICTED: hypothetical protein XP_002343508 [Homo ... 34 1.3 gi|89363026 calponin-homology and microtubule-associated protein... 34 1.3 gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 33 2.2 gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 33 2.2 gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 33 2.2 gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo ... 33 2.2 gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 33 2.2 gi|239743230 PREDICTED: hypothetical protein [Homo sapiens] 32 3.8 gi|239508907 PREDICTED: hypothetical protein [Homo sapiens] 32 3.8 gi|110832843 TBP-associated factor 4 [Homo sapiens] 32 3.8 gi|55956786 spindle assembly associated Sfi1 homolog isoform a [... 32 5.0 gi|55956784 spindle assembly associated Sfi1 homolog isoform b [... 32 5.0 gi|9507173 taste receptor T2R5 [Homo sapiens] 32 5.0 gi|222144283 hypothetical protein LOC65998 [Homo sapiens] 32 6.5 >gi|110825988 TAR RNA binding protein 1 [Homo sapiens] Length = 1621 Score = 3227 bits (8368), Expect = 0.0 Identities = 1621/1621 (100%), Positives = 1621/1621 (100%) Query: 1 MEWVLAEALLSQSRDPRALLGALCQGEASAERVETLRFLLQRLEDEEARGSGGAGALPEA 60 MEWVLAEALLSQSRDPRALLGALCQGEASAERVETLRFLLQRLEDEEARGSGGAGALPEA Sbjct: 1 MEWVLAEALLSQSRDPRALLGALCQGEASAERVETLRFLLQRLEDEEARGSGGAGALPEA 60 Query: 61 AREVAAGYLVPLLRSLRGRPAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAGRPQLAAAL 120 AREVAAGYLVPLLRSLRGRPAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAGRPQLAAAL Sbjct: 61 AREVAAGYLVPLLRSLRGRPAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAGRPQLAAAL 120 Query: 121 AEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVALALGGGGDGDE 180 AEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVALALGGGGDGDE Sbjct: 121 AEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVALALGGGGDGDE 180 Query: 181 AGPAEDAAALVAGRLLPVLVQCGGAALRAVWGGLAAPGASLGSGRVEEKLLVLSALAEKL 240 AGPAEDAAALVAGRLLPVLVQCGGAALRAVWGGLAAPGASLGSGRVEEKLLVLSALAEKL Sbjct: 181 AGPAEDAAALVAGRLLPVLVQCGGAALRAVWGGLAAPGASLGSGRVEEKLLVLSALAEKL 240 Query: 241 LPEPGGDRARGAREAGPDARRCWRFWRTVQAGLGQADALTRKRARYLLQRAVEVSAELGA 300 LPEPGGDRARGAREAGPDARRCWRFWRTVQAGLGQADALTRKRARYLLQRAVEVSAELGA Sbjct: 241 LPEPGGDRARGAREAGPDARRCWRFWRTVQAGLGQADALTRKRARYLLQRAVEVSAELGA 300 Query: 301 DCTCGPQEGNGPSLFWWSERKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFEY 360 DCTCGPQEGNGPSLFWWSERKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFEY Sbjct: 301 DCTCGPQEGNGPSLFWWSERKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFEY 360 Query: 361 AVSEENGCWLFHPSWHMCIYKRMFESENKILSKEGVIHFLELYETKILPFSPEFSEFIIG 420 AVSEENGCWLFHPSWHMCIYKRMFESENKILSKEGVIHFLELYETKILPFSPEFSEFIIG Sbjct: 361 AVSEENGCWLFHPSWHMCIYKRMFESENKILSKEGVIHFLELYETKILPFSPEFSEFIIG 420 Query: 421 PLMDALSESSLYSRSPGQPIGSCSPLGLKLQKFLVTYISLLPEEIKSSFLLKFIRKMTSR 480 PLMDALSESSLYSRSPGQPIGSCSPLGLKLQKFLVTYISLLPEEIKSSFLLKFIRKMTSR Sbjct: 421 PLMDALSESSLYSRSPGQPIGSCSPLGLKLQKFLVTYISLLPEEIKSSFLLKFIRKMTSR 480 Query: 481 HWCAVPILFLSKALANVPRHKALGIDGLLALRDVIHCTMITHQILLRGAAQCYLLQTAMN 540 HWCAVPILFLSKALANVPRHKALGIDGLLALRDVIHCTMITHQILLRGAAQCYLLQTAMN Sbjct: 481 HWCAVPILFLSKALANVPRHKALGIDGLLALRDVIHCTMITHQILLRGAAQCYLLQTAMN 540 Query: 541 LLDVEKVSLSDVSTFLMSLRQEESLGRGTSLWTELCDWLRVNESYFKPSPTCSSIGLHKT 600 LLDVEKVSLSDVSTFLMSLRQEESLGRGTSLWTELCDWLRVNESYFKPSPTCSSIGLHKT Sbjct: 541 LLDVEKVSLSDVSTFLMSLRQEESLGRGTSLWTELCDWLRVNESYFKPSPTCSSIGLHKT 600 Query: 601 SLNAYVKSIVQEYVKSSAWETGENCFMPDWFEAKLVSLMVLLAVDVEGMKTQYSGKQRTE 660 SLNAYVKSIVQEYVKSSAWETGENCFMPDWFEAKLVSLMVLLAVDVEGMKTQYSGKQRTE Sbjct: 601 SLNAYVKSIVQEYVKSSAWETGENCFMPDWFEAKLVSLMVLLAVDVEGMKTQYSGKQRTE 660 Query: 661 NVLRIFLDPLLDVLMKFSTNAYMPLLKTDRCLQLLLKLLNTCRLKGSSAQDDEVSTVLQN 720 NVLRIFLDPLLDVLMKFSTNAYMPLLKTDRCLQLLLKLLNTCRLKGSSAQDDEVSTVLQN Sbjct: 661 NVLRIFLDPLLDVLMKFSTNAYMPLLKTDRCLQLLLKLLNTCRLKGSSAQDDEVSTVLQN 720 Query: 721 FFMSTTESISEFILRRLTMNELNSVSDLDRCHLYLMVLTELINLHLKVGWKRGNPIWRVI 780 FFMSTTESISEFILRRLTMNELNSVSDLDRCHLYLMVLTELINLHLKVGWKRGNPIWRVI Sbjct: 721 FFMSTTESISEFILRRLTMNELNSVSDLDRCHLYLMVLTELINLHLKVGWKRGNPIWRVI 780 Query: 781 SLLKNASIQHLQEMDSGQEPTVGSQIQRVVSMAALAMVCEAIDQKPELQLDSLHAGPLES 840 SLLKNASIQHLQEMDSGQEPTVGSQIQRVVSMAALAMVCEAIDQKPELQLDSLHAGPLES Sbjct: 781 SLLKNASIQHLQEMDSGQEPTVGSQIQRVVSMAALAMVCEAIDQKPELQLDSLHAGPLES 840 Query: 841 FLSSLQLNQTLQKPHAEEQSSYAHPLECSSVLEESSSSQGWGKIVAQYIHDQWVCLSFLL 900 FLSSLQLNQTLQKPHAEEQSSYAHPLECSSVLEESSSSQGWGKIVAQYIHDQWVCLSFLL Sbjct: 841 FLSSLQLNQTLQKPHAEEQSSYAHPLECSSVLEESSSSQGWGKIVAQYIHDQWVCLSFLL 900 Query: 901 KKYHTLIPTTGSEILEPFLPAVQMPIRTLQSALEALTVLSSDQVLPVFHCLKVLVPKLLT 960 KKYHTLIPTTGSEILEPFLPAVQMPIRTLQSALEALTVLSSDQVLPVFHCLKVLVPKLLT Sbjct: 901 KKYHTLIPTTGSEILEPFLPAVQMPIRTLQSALEALTVLSSDQVLPVFHCLKVLVPKLLT 960 Query: 961 SSESLCIESFDMAWKIISSLSNTQLIFWANLKAFVQFVFDNKVLTIAAKIKGQAYFKIKE 1020 SSESLCIESFDMAWKIISSLSNTQLIFWANLKAFVQFVFDNKVLTIAAKIKGQAYFKIKE Sbjct: 961 SSESLCIESFDMAWKIISSLSNTQLIFWANLKAFVQFVFDNKVLTIAAKIKGQAYFKIKE 1020 Query: 1021 IMYKIIEMSAIKTGVFNTLISYCCQSWIVSASNVSQGSLSSAKNYSELILEACIFGTVFR 1080 IMYKIIEMSAIKTGVFNTLISYCCQSWIVSASNVSQGSLSSAKNYSELILEACIFGTVFR Sbjct: 1021 IMYKIIEMSAIKTGVFNTLISYCCQSWIVSASNVSQGSLSSAKNYSELILEACIFGTVFR 1080 Query: 1081 RDQRLVQDVQTFIENLGHDCAANIVMENTKREDHYVRICAVKFLCLLDGSNMSHKLFIED 1140 RDQRLVQDVQTFIENLGHDCAANIVMENTKREDHYVRICAVKFLCLLDGSNMSHKLFIED Sbjct: 1081 RDQRLVQDVQTFIENLGHDCAANIVMENTKREDHYVRICAVKFLCLLDGSNMSHKLFIED 1140 Query: 1141 LAIKLLDKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGIIDRIFQAGF 1200 LAIKLLDKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGIIDRIFQAGF Sbjct: 1141 LAIKLLDKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGIIDRIFQAGF 1200 Query: 1201 TNNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEENLKTSICTFLAVLSHLDIITQN 1260 TNNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEENLKTSICTFLAVLSHLDIITQN Sbjct: 1201 TNNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEENLKTSICTFLAVLSHLDIITQN 1260 Query: 1261 IPEKKLILKQALIVVLQWCFNHNFSVRLYALVALKKLWTVCKVLSVEEFDALTPVIESSL 1320 IPEKKLILKQALIVVLQWCFNHNFSVRLYALVALKKLWTVCKVLSVEEFDALTPVIESSL Sbjct: 1261 IPEKKLILKQALIVVLQWCFNHNFSVRLYALVALKKLWTVCKVLSVEEFDALTPVIESSL 1320 Query: 1321 HQVESMHGAGNAKKNWQRIQEHFFFATFHPLKDYCLETIFYILPRLSGLIEDEWITIDKF 1380 HQVESMHGAGNAKKNWQRIQEHFFFATFHPLKDYCLETIFYILPRLSGLIEDEWITIDKF Sbjct: 1321 HQVESMHGAGNAKKNWQRIQEHFFFATFHPLKDYCLETIFYILPRLSGLIEDEWITIDKF 1380 Query: 1381 TRFTDVPLAAGFQWYLSQTQLSKLKPGDWSQQDIGTNLVEADNQAEWTDVQKKIIPWNSR 1440 TRFTDVPLAAGFQWYLSQTQLSKLKPGDWSQQDIGTNLVEADNQAEWTDVQKKIIPWNSR Sbjct: 1381 TRFTDVPLAAGFQWYLSQTQLSKLKPGDWSQQDIGTNLVEADNQAEWTDVQKKIIPWNSR 1440 Query: 1441 VSDLDLELLFQDRAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCI 1500 VSDLDLELLFQDRAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCI Sbjct: 1441 VSDLDLELLFQDRAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCI 1500 Query: 1501 SDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEK 1560 SDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEK Sbjct: 1501 SDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEK 1560 Query: 1561 SLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLSHGDTK 1620 SLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLSHGDTK Sbjct: 1561 SLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLSHGDTK 1620 Query: 1621 P 1621 P Sbjct: 1621 P 1621 >gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo sapiens] Length = 5033 Score = 40.4 bits (93), Expect = 0.014 Identities = 46/150 (30%), Positives = 56/150 (37%), Gaps = 18/150 (12%) Query: 111 AGRPQLAAALAEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVAL 170 AG + A AEE L A A V+AA G LR L RV Sbjct: 4260 AGAAEAGAEGAEEGAAGLEGTAATAAAGATARVVAAAGRALRGLSYRSLRRRVRRLRRLT 4319 Query: 171 ALGGGGDGDEAGPAEDAAALVAGRLLPVLVQCGGAALRAVWGGLAAPGASL-GSGRVE-- 227 A +AA VA L + + G A A G L SL G G VE Sbjct: 4320 A-------------REAATAVAALLWAAVTRAGAAGAGAAAGALGLLWGSLFGGGLVEGA 4366 Query: 228 EKLLVLSALAEKLLPEPGGDRARGAREAGP 257 +K+ V LA +P+P D G + AGP Sbjct: 4367 KKVTVTELLAG--MPDPTSDEVHGEQPAGP 4394 Score = 31.2 bits (69), Expect = 8.5 Identities = 50/174 (28%), Positives = 59/174 (33%), Gaps = 37/174 (21%) Query: 44 EDEEARGSGGAGALPEAAREVAAGYLVPLLRSLRGRPAGGPDPSLQPRHRRRVLRAAGAA 103 E +E G+G A A E A E AAG L A G RV+ AAG A Sbjct: 4253 ETDEDEGAGAAEAGAEGAEEGAAG-----LEGTAATAAAGA--------TARVVAAAGRA 4299 Query: 104 LRSCV------RLAGRPQLAAALAEEALRDLL-AGWRAPGAEAAVEVLAAVGPCLRPRED 156 LR R+ +L A A A+ LL A GA A A+G Sbjct: 4300 LRGLSYRSLRRRVRRLRRLTAREAATAVAALLWAAVTRAGAAGAGAAAGALGLLWGSLFG 4359 Query: 157 GPLLERVAGTAVALALGG-----------------GGDGDEAGPAEDAAALVAG 193 G L+E V L G GGD D G +E A G Sbjct: 4360 GGLVEGAKKVTVTELLAGMPDPTSDEVHGEQPAGPGGDADGEGASEGAGDAAEG 4413 >gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo sapiens] Length = 5038 Score = 40.4 bits (93), Expect = 0.014 Identities = 46/150 (30%), Positives = 56/150 (37%), Gaps = 18/150 (12%) Query: 111 AGRPQLAAALAEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVAL 170 AG + A AEE L A A V+AA G LR L RV Sbjct: 4265 AGAAEAGAEGAEEGAAGLEGTAATAAAGATARVVAAAGRALRGLSYRSLRRRVRRLRRLT 4324 Query: 171 ALGGGGDGDEAGPAEDAAALVAGRLLPVLVQCGGAALRAVWGGLAAPGASL-GSGRVE-- 227 A +AA VA L + + G A A G L SL G G VE Sbjct: 4325 A-------------REAATAVAALLWAAVTRAGAAGAGAAAGALGLLWGSLFGGGLVEGA 4371 Query: 228 EKLLVLSALAEKLLPEPGGDRARGAREAGP 257 +K+ V LA +P+P D G + AGP Sbjct: 4372 KKVTVTELLAG--MPDPTSDEVHGEQPAGP 4399 Score = 31.2 bits (69), Expect = 8.5 Identities = 50/174 (28%), Positives = 59/174 (33%), Gaps = 37/174 (21%) Query: 44 EDEEARGSGGAGALPEAAREVAAGYLVPLLRSLRGRPAGGPDPSLQPRHRRRVLRAAGAA 103 E +E G+G A A E A E AAG L A G RV+ AAG A Sbjct: 4258 ETDEDEGAGAAEAGAEGAEEGAAG-----LEGTAATAAAGA--------TARVVAAAGRA 4304 Query: 104 LRSCV------RLAGRPQLAAALAEEALRDLL-AGWRAPGAEAAVEVLAAVGPCLRPRED 156 LR R+ +L A A A+ LL A GA A A+G Sbjct: 4305 LRGLSYRSLRRRVRRLRRLTAREAATAVAALLWAAVTRAGAAGAGAAAGALGLLWGSLFG 4364 Query: 157 GPLLERVAGTAVALALGG-----------------GGDGDEAGPAEDAAALVAG 193 G L+E V L G GGD D G +E A G Sbjct: 4365 GGLVEGAKKVTVTELLAGMPDPTSDEVHGEQPAGPGGDADGEGASEGAGDAAEG 4418 >gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] Length = 651 Score = 38.5 bits (88), Expect = 0.053 Identities = 24/60 (40%), Positives = 25/60 (41%) Query: 134 APGAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVALALGGGGDGDEAGPAEDAAALVAG 193 AP E A E A P P + L AL LGG GD DE G A D AA G Sbjct: 33 APPPEGAQEAAPAPRPPPEPDDAAAALRLALDQLSALGLGGAGDTDEEGAAGDGAAAAGG 92 >gi|239751065 PREDICTED: hypothetical protein XP_002347692 [Homo sapiens] Length = 537 Score = 37.7 bits (86), Expect = 0.091 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 23/93 (24%) Query: 157 GPLLERVAGTAVALA-LGGGGDGDEAGPAED-----------AAALVAGRLLPVLV--QC 202 GP +E +AG + A L G G GPAE AA+ V+G LP+++ + Sbjct: 283 GPQVEALAGELSSWAQLWGEGQAPRPGPAERPFPGEKGPPGAAASAVSGSWLPIMLESEA 342 Query: 203 GG--AALRAVW-------GGLAAPGASLGSGRV 226 GG AA +A W G AAPG SLG+ R+ Sbjct: 343 GGTDAAGQAGWRSPGKSMGDAAAPGGSLGNPRL 375 >gi|8393009 chromosome 11 open reading frame2 [Homo sapiens] Length = 782 Score = 37.7 bits (86), Expect = 0.091 Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 21/157 (13%) Query: 20 LGALCQGEASAERVETLRFLLQRLEDEEARGSGGAGALPEAAREVAAGYLVPLLRSLRGR 79 +G LCQ A+ + + A+G GA L AR++ + Y + R L + Sbjct: 312 VGGLCQVAAAYQELFA------------AQGPAGAEKLAAFARQLGSRYFALVERRL-AQ 358 Query: 80 PAGGPDPSLQPR-----HRRRVLRAAGAALRSCVRLAGRPQLAAALAEEALRDLLAGWRA 134 GG D SL R HRR LRA GA L + ++ +A E L L G RA Sbjct: 359 EQGGGDNSLLVRALDRFHRR--LRAPGALLAAAGLADAATEIVERVARERLGHHLQGLRA 416 Query: 135 PGAEAAVEVLAAV-GPCLRPREDGPLLERVAGTAVAL 170 +V A+ P + +E L E +A A ++ Sbjct: 417 AFLGCLTDVRQALAAPRVAGKEGPGLAELLANVASSI 453 >gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] Length = 819 Score = 36.6 bits (83), Expect = 0.20 Identities = 59/217 (27%), Positives = 83/217 (38%), Gaps = 14/217 (6%) Query: 74 RSLRGRPAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAGRPQLAAALAEEALRDLLAG-- 131 R + R GG P + + R+ AGA R + GR + +AA + L + Sbjct: 438 RGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKK-QGRQKASAAGTKSRGGGLKSHSG 496 Query: 132 ---WR-APGAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVALALGGGGDGDEAGPAEDA 187 WR AEAA E A G R R+ P ++ A A A + GG + A A Sbjct: 497 KNLWRRGQKAEAAGEKATAAGAKSRGRKQ-PRRQKPA-VAGAKSRVGGSKSRQRQKAVAA 554 Query: 188 AALVAGRLLPVLVQCGGAALRAVWGGLAAPGASLGSGRVEEKLLVLSALAEKLLPEPGGD 247 A G + GG WG AA + G G + +A K GG Sbjct: 555 GATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGK 614 Query: 248 RARGAREAGPDARRCWRFWRTVQAGLGQADALTRKRA 284 +A + AG A+ + WR GQ DA ++A Sbjct: 615 KAWRQKAAGTGAKSRKKPWRR-----GQKDAAAAEKA 646 >gi|147903292 nuclear localized factor 1 [Homo sapiens] Length = 369 Score = 36.6 bits (83), Expect = 0.20 Identities = 31/80 (38%), Positives = 35/80 (43%), Gaps = 2/80 (2%) Query: 41 QRLEDEEARGSGGAGALPEAAREVAAGYLVPLLRSLRGR-PAGG-PDPSLQPRHRRRVLR 98 +RLE E G AG A E G LR LR PAGG P P VLR Sbjct: 240 ERLEAEGTVALGRAGDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSLVLR 299 Query: 99 AAGAALRSCVRLAGRPQLAA 118 G ALR C + GR + A+ Sbjct: 300 PPGTALRQCSTVVGRSRKAS 319 >gi|4557439 cyclin-dependent kinase 3 [Homo sapiens] Length = 305 Score = 36.2 bits (82), Expect = 0.27 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Query: 1527 IDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGIPANLIQQLDVCVEI 1586 +D Q+ + G GV AK+ + Q +K L L E EG+P+ I+++ + E+ Sbjct: 1 MDMFQKVEKIGEGTYGVVYKAKNRETGQLVALKKIRLDL--EMEGVPSTAIREISLLKEL 58 Query: 1587 PQQGIIRSLN-VHVSGAL-LIWEYTRQQLLSHGDTKP 1621 I+R L+ VH L L++E+ Q L + D+ P Sbjct: 59 KHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTP 95 >gi|223634006 hypothetical protein LOC441869 [Homo sapiens] Length = 399 Score = 35.4 bits (80), Expect = 0.45 Identities = 59/191 (30%), Positives = 70/191 (36%), Gaps = 28/191 (14%) Query: 28 ASAERVETLRFLLQRLEDEEARGSGGAGALPEAAREVAAGYLVPLLRSLRGRPAGGPDPS 87 A+A R LRFLL R +AR GA AL AA + + LL G DP Sbjct: 211 AAAGRGAALRFLLARGARVDARDGAGATALGLAAALGRSQDIEVLL-------GHGADPG 263 Query: 88 LQPRHRRRVL-RAAGAALRSCVRLAGRPQLAAALAEEALRDLLAGWRAPGAEAAVEVLAA 146 ++ RH R L RAA V+L L AE RD L P A+ E Sbjct: 264 IRDRHGRSALHRAAARGHLLAVQL-----LVTQGAEVDARDTLG--LTPLHHASREGHVE 316 Query: 147 VGPCLRPR----------EDGPL---LERVAGTAVALALGGGGDGDEAGPAEDAAALVAG 193 V CL R PL ER G V L L G + A + G Sbjct: 317 VAGCLLDRGAQVDATGWLRKTPLHLAAERGHGPTVGLLLSRGASPTLRTQWAEVAQMPEG 376 Query: 194 RLLPVLVQCGG 204 L L + GG Sbjct: 377 DLPQALPELGG 387 Score = 35.0 bits (79), Expect = 0.59 Identities = 60/177 (33%), Positives = 69/177 (38%), Gaps = 16/177 (9%) Query: 36 LRFLLQRLEDEEARGSGGAGALPEAAREVAAGYLVPLLRSLRGRPAGGPDPSLQPRHRRR 95 +R LLQR A G AL EAA + LL A L P H Sbjct: 90 VRLLLQRGAPVGAVDRAGRTALHEAAWH-GHSRVAELLLQRGASAAARSGTGLTPLHWAA 148 Query: 96 VLRAAGAALRSCVRLAGRPQLAAALAEEALRDLLAGWRAPGAEAAV-EVLAAVGPCLRPR 154 L A R + A P AAA AE+A A W A G AV E+LAA G L Sbjct: 149 ALGHTLLAAR--LLEAPGPGPAAAEAEDARGWTAAHWAAAGGRLAVLELLAAGGAGL--- 203 Query: 155 EDGPLLERVA---GTAVALALGGGG-----DGDEAGPAEDAAALVAGRLLPVLVQCG 203 DG LL A G A+ L G DG A AAAL + + VL+ G Sbjct: 204 -DGALLVAAAAGRGAALRFLLARGARVDARDGAGATALGLAAALGRSQDIEVLLGHG 259 >gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo sapiens] Length = 999 Score = 35.0 bits (79), Expect = 0.59 Identities = 32/87 (36%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 181 AGPAEDAAAL---VAGRLLPVLVQCGGAALRAVWGGLAAPGASLGSGRVEEKLLVLSALA 237 AG AE + L + LLP + G AA GG G S S S+L+ Sbjct: 112 AGRAEQGSTLRRRIREHLLPAVK--GPAAASGAAGGTPPGGRSPDSAPSSSS--ASSSLS 167 Query: 238 EKLLPEPGGDRAR--GAREAGPDARRC 262 P P GDRAR GAR GP A C Sbjct: 168 SSPQPPPRGDRARDEGARRQGPGAHLC 194 >gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo sapiens] Length = 284 Score = 34.3 bits (77), Expect = 1.0 Identities = 53/185 (28%), Positives = 64/185 (34%), Gaps = 26/185 (14%) Query: 19 LLGALCQGEA-SAERVETLRFLLQRLEDEEARGSGGAGALPE--------AAREVAAGYL 69 L G C +A SAE E FLL R A PE AR + Sbjct: 6 LRGQRCADKAGSAESEENRNFLLMRPGQRTAPAGSPTTPRPENDPSREIGEARASGQDQV 65 Query: 70 VPLLRS--------LRGRPAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAG----RPQLA 117 +P + L R P P+ PR R R LR LR+ V +AG R L Sbjct: 66 LPTHPAPCHSYPTRLPDRHPRPPAPAPAPRERARGLR-----LRTVVGVAGVLVERDDLH 120 Query: 118 AALAEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVALALGGGGD 177 A LA + + LL A + AA L G ER + GGGG Sbjct: 121 ALLAIQVIVQLLCAAAEARGAATLPAAAATTTALDGPGAGGGAERGGSGRSSAGGGGGGG 180 Query: 178 GDEAG 182 G G Sbjct: 181 GGGGG 185 >gi|169211642 PREDICTED: hypothetical protein [Homo sapiens] Length = 378 Score = 34.3 bits (77), Expect = 1.0 Identities = 55/171 (32%), Positives = 64/171 (37%), Gaps = 26/171 (15%) Query: 25 QGEASAERVETLRFLLQRLEDEEARGSGGAGALPEAAREVAAGYLVPLLR-SLRGRPAGG 83 Q AS E R L +LE AR + A E A+ A LV LR SLR Sbjct: 149 QEAASRELESKCRALESQLE---ARAAANAELRREVAQREA---LVSALRCSLRTEERRF 202 Query: 84 PDPSLQPRHRRRVL------RAAGAALRSCVRLAGRPQLAAALAEEALRDLLAGWRAPGA 137 + + HR VL AA SC A R +L AA A+ R A +PGA Sbjct: 203 LEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQ---RPQPAPAASPGA 259 Query: 138 EAAVEVLAAVGPCLRPREDGPLLERVAGTAVALALGGGGDGDEAGPAEDAA 188 GP RP +R G V L G GPA DAA Sbjct: 260 P---------GPS-RPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA 300 >gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo sapiens] Length = 378 Score = 34.3 bits (77), Expect = 1.0 Identities = 55/171 (32%), Positives = 64/171 (37%), Gaps = 26/171 (15%) Query: 25 QGEASAERVETLRFLLQRLEDEEARGSGGAGALPEAAREVAAGYLVPLLR-SLRGRPAGG 83 Q AS E R L +LE AR + A E A+ A LV LR SLR Sbjct: 149 QEAASRELESKCRALESQLE---ARAAANAELRREVAQREA---LVSALRCSLRTEERRF 202 Query: 84 PDPSLQPRHRRRVL------RAAGAALRSCVRLAGRPQLAAALAEEALRDLLAGWRAPGA 137 + + HR VL AA SC A R +L AA A+ R A +PGA Sbjct: 203 LEELRRRSHRATVLGTELQKHTEAAAYLSCQLHAARQRLQAAAAQ---RPQPAPAASPGA 259 Query: 138 EAAVEVLAAVGPCLRPREDGPLLERVAGTAVALALGGGGDGDEAGPAEDAA 188 GP RP +R G V L G GPA DAA Sbjct: 260 P---------GPS-RPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA 300 >gi|54873602 hypothetical protein LOC220382 [Homo sapiens] Length = 426 Score = 34.3 bits (77), Expect = 1.0 Identities = 59/224 (26%), Positives = 80/224 (35%), Gaps = 30/224 (13%) Query: 21 GALCQGEASAERVETLRFLLQRLEDEEARGSGGAGALPEAAREVA-AGYLVPLLRSLRG- 78 GAL G + E R LL ++ + ++ R+V YL ++ G Sbjct: 48 GALLSGAEGGDVREATRDLLSFIDSASSNIKLALDKPGKSKRKVNHRKYLQKQIKRCSGL 107 Query: 79 ---RPAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAGRPQLAAALAEEALRDLLAGWRAP 135 P G P PS +R L A A P +AA +A A A Sbjct: 108 MGAAPPGPPSPSAADTPAKRPLAAPSA-----------PTVAAPAHGKAAPRREASQAAA 156 Query: 136 GAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVALALG------GGGDGDEAGPAEDAAA 189 A LAA+ LR G E G A A G GG GD AGPA A A Sbjct: 157 AASLQSRSLAALFDSLRHVPGGA--EPAGGEVAAPAAGLGGAGTGGAGGDVAGPA-GATA 213 Query: 190 LVAGRLLPVLVQCGGAAL-----RAVWGGLAAPGASLGSGRVEE 228 + R +P+ + + RA GG G + G +E+ Sbjct: 214 IPGARKVPLRARNLPPSFFTEPSRAGGGGCGPSGPDVSLGDLEK 257 >gi|239756545 PREDICTED: hypothetical protein XP_002344931 [Homo sapiens] Length = 427 Score = 33.9 bits (76), Expect = 1.3 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 11/58 (18%) Query: 180 EAGPAEDAAALVAGRLLPVLV--QCGG--AALRAVW-------GGLAAPGASLGSGRV 226 E GP AA+ V+G LP+++ + GG AA +A W G AAPG SLG+ R+ Sbjct: 208 EKGPPGAAASAVSGSWLPIMLESEAGGTDAAGQAGWRSPGKSMGDAAAPGGSLGNPRL 265 >gi|239745511 PREDICTED: hypothetical protein XP_002343508 [Homo sapiens] Length = 427 Score = 33.9 bits (76), Expect = 1.3 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 11/58 (18%) Query: 180 EAGPAEDAAALVAGRLLPVLV--QCGG--AALRAVW-------GGLAAPGASLGSGRV 226 E GP AA+ V+G LP+++ + GG AA +A W G AAPG SLG+ R+ Sbjct: 208 EKGPPGAAASAVSGSWLPIMLESEAGGTDAAGQAGWRSPGKSMGDAAAPGGSLGNPRL 265 >gi|89363026 calponin-homology and microtubule-associated protein [Homo sapiens] Length = 236 Score = 33.9 bits (76), Expect = 1.3 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 39 LLQRLEDEEARGSGGAGALPEAAREVAAGYLVPLLRSLRGRPAGGPDP 86 L QRLE+ + R GAG+L E A + +GY+ + S + R G PDP Sbjct: 107 LRQRLEERQRRRKQGAGSLQELAPQDGSGYM-DVGVSQKARGEGVPDP 153 >gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo sapiens] Length = 3969 Score = 33.1 bits (74), Expect = 2.2 Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 25/141 (17%) Query: 50 GSGGAGALPEAAREVAAGYLVPLLRSLRGRPAGGPDPSLQPRHRRRVLRAAGAALRSCVR 109 G GG L A R+ L+P G P GG P P AA A Sbjct: 20 GGGGRRGLGGAPRQRVPALLLP-----PGPPVGGGGPGAPPSPPAVAAAAAAAGSSGAGV 74 Query: 110 LAGRPQLAAALAEEALRDLLAGWRA----------PGAEAAVEVLAAVGPCLRPREDGPL 159 G +AA + A + A PG +AA++V AA+G LR Sbjct: 75 PGGAAAASAASSSSASSSSSSSSSASSGPALLRVGPGFDAALQVSAAIGTNLR------R 128 Query: 160 LERVAGTAVALALGGGGDGDE 180 V G + GGGG G++ Sbjct: 129 FRAVFGESG----GGGGSGED 145 >gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] Length = 344 Score = 33.1 bits (74), Expect = 2.2 Identities = 39/109 (35%), Positives = 44/109 (40%), Gaps = 9/109 (8%) Query: 55 GALPEAAREVAAGYLVPLLRSLRGR-PAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAGR 113 G P A + +PL R R P P L+PRH R+ + G V A Sbjct: 7 GTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVRVPAARA 66 Query: 114 PQLAAALAEEALRDLLAGW-------RAPGAEAAVEVLAAV-GPCLRPR 154 LA ALA A R LLAG R PG V VL V GP PR Sbjct: 67 LALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPR 115 >gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] Length = 344 Score = 33.1 bits (74), Expect = 2.2 Identities = 39/109 (35%), Positives = 44/109 (40%), Gaps = 9/109 (8%) Query: 55 GALPEAAREVAAGYLVPLLRSLRGR-PAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAGR 113 G P A + +PL R R P P L+PRH R+ + G V A Sbjct: 7 GTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVRVPAARA 66 Query: 114 PQLAAALAEEALRDLLAGW-------RAPGAEAAVEVLAAV-GPCLRPR 154 LA ALA A R LLAG R PG V VL V GP PR Sbjct: 67 LALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPR 115 >gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo sapiens] Length = 1281 Score = 33.1 bits (74), Expect = 2.2 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Query: 798 QEPTVGSQIQRVVSMAALAMVCEAIDQKPELQLDSLHAGPLESFLSSLQLNQTLQKPHAE 857 QE + ++ +VV + M C+ + K +L+L L L S+ + NQ LQ+P E Sbjct: 938 QENSALAEQLQVVLIDKAGMQCDLEELKKKLELTELTLQQLSSWCEAPDANQQLQQPTDE 997 Query: 858 EQSSYAHPLECSSVLEESSSSQGWGKIVAQYIHDQ 892 AH V+E Q + A+Y+H + Sbjct: 998 RAQLEAH---LGQVMEWLKYLQMEREQYAEYLHGE 1029 >gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo sapiens] Length = 344 Score = 33.1 bits (74), Expect = 2.2 Identities = 39/109 (35%), Positives = 44/109 (40%), Gaps = 9/109 (8%) Query: 55 GALPEAAREVAAGYLVPLLRSLRGR-PAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAGR 113 G P A + +PL R R P P L+PRH R+ + G V A Sbjct: 7 GTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVRVPAARA 66 Query: 114 PQLAAALAEEALRDLLAGW-------RAPGAEAAVEVLAAV-GPCLRPR 154 LA ALA A R LLAG R PG V VL V GP PR Sbjct: 67 LALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPR 115 >gi|239743230 PREDICTED: hypothetical protein [Homo sapiens] Length = 331 Score = 32.3 bits (72), Expect = 3.8 Identities = 30/98 (30%), Positives = 37/98 (37%), Gaps = 5/98 (5%) Query: 130 AGWRAPGAEAAVEVLAAVGPCL--RPREDGPLLE-RVAGTAVALALGGGGDGDEAGPAED 186 AG+ A + EV+ A RP + G ++ VAG V L G G D GP Sbjct: 192 AGFEAESVDGLAEVMGATAEVALARPVKSGAVVVGAVAGVVVCLKKGAGKGTDAGGPMLL 251 Query: 187 AAALVAGRLLPVLVQCGGAALRAVWGGLAAPGASLGSG 224 G + VLV G L PGA L G Sbjct: 252 KTGWKVGAV--VLVVVGREELEGAVAVTEGPGAPLAPG 287 >gi|239508907 PREDICTED: hypothetical protein [Homo sapiens] Length = 331 Score = 32.3 bits (72), Expect = 3.8 Identities = 30/98 (30%), Positives = 37/98 (37%), Gaps = 5/98 (5%) Query: 130 AGWRAPGAEAAVEVLAAVGPCL--RPREDGPLLE-RVAGTAVALALGGGGDGDEAGPAED 186 AG+ A + EV+ A RP + G ++ VAG V L G G D GP Sbjct: 192 AGFEAESVDGLAEVMGATAEVALARPVKSGAVVVGAVAGVVVCLKKGAGKGTDAGGPMLL 251 Query: 187 AAALVAGRLLPVLVQCGGAALRAVWGGLAAPGASLGSG 224 G + VLV G L PGA L G Sbjct: 252 KTGWKVGAV--VLVVVGREELEGAVAVTEGPGAPLAPG 287 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 32.3 bits (72), Expect = 3.8 Identities = 40/133 (30%), Positives = 46/133 (34%), Gaps = 18/133 (13%) Query: 51 SGGAGALPEAAREVAAGYLVPLLRSLRGRPAGGPDPSLQPRHRRRVLRAAGAALRSCVRL 110 +G AGA P A E A G + R RP GG P RR L AG A +L Sbjct: 68 AGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPA-PPAAKL 126 Query: 111 AGRPQLAAALAEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLLERVAGTAVAL 170 P+ +A G+ A V AAV P GP A Sbjct: 127 RPPPEGSA-----------------GSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAAR 169 Query: 171 ALGGGGDGDEAGP 183 A G G G GP Sbjct: 170 AGPGPGPGPGPGP 182 >gi|55956786 spindle assembly associated Sfi1 homolog isoform a [Homo sapiens] Length = 1242 Score = 32.0 bits (71), Expect = 5.0 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 11/87 (12%) Query: 95 RVLRAAGAALRSCVRLAGRPQLAAALA-EEALRDLLAGWRAP--GAEAAVEVLAAVGPCL 151 R+LR A + S +L + Q+ AA + A+R W+ G + LAA+ P Sbjct: 892 RLLRFAASMKASRQQLQAQQQVQAAHSLHRAVRRCATLWKQKVLGRGGKPQPLAAIAPSR 951 Query: 152 RPREDGPLLERVAGTAVALALGGGGDG 178 + +GPLL R+A G GDG Sbjct: 952 KVTFEGPLLNRIA--------AGAGDG 970 >gi|55956784 spindle assembly associated Sfi1 homolog isoform b [Homo sapiens] Length = 1211 Score = 32.0 bits (71), Expect = 5.0 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 11/87 (12%) Query: 95 RVLRAAGAALRSCVRLAGRPQLAAALA-EEALRDLLAGWRAP--GAEAAVEVLAAVGPCL 151 R+LR A + S +L + Q+ AA + A+R W+ G + LAA+ P Sbjct: 861 RLLRFAASMKASRQQLQAQQQVQAAHSLHRAVRRCATLWKQKVLGRGGKPQPLAAIAPSR 920 Query: 152 RPREDGPLLERVAGTAVALALGGGGDG 178 + +GPLL R+A G GDG Sbjct: 921 KVTFEGPLLNRIA--------AGAGDG 939 >gi|9507173 taste receptor T2R5 [Homo sapiens] Length = 299 Score = 32.0 bits (71), Expect = 5.0 Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 1205 ASIKYFIEWIIILILHKFPQFLPKFW----DCFSYGEENLKTSICTFLAVLSHLDIITQN 1260 A ++ ++W+IIL L FP F W F TFL+V I T + Sbjct: 52 AGCRFLLQWLIILDLSLFPLFQSSRWLRYLSIFWVLVSQASLWFATFLSVFYCKKITTFD 111 Query: 1261 IPEKKLILKQALIVVLQWCFNHNFSVRLYALVAL 1294 P L LKQ + WC F + L V + Sbjct: 112 RP-AYLWLKQRAYNLSLWCLLGYFIINLLLTVQI 144 >gi|222144283 hypothetical protein LOC65998 [Homo sapiens] Length = 678 Score = 31.6 bits (70), Expect = 6.5 Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 18/124 (14%) Query: 9 LLSQSRDPRALLGALCQGEASAERVETLRFLLQRLEDEEARGSGGAGALPEAAREVAAGY 68 ++S S D LGA GEA V+ + E+EE G+G P+ + AG Sbjct: 162 VISNSWDAHLGLGAC--GEAEGLGVQGAEEEEEEEEEEEEEGAGVPACPPKGPGKAPAG- 218 Query: 69 LVPLLRSLRGRPAGGPDPSLQPRHRRRVLRAAGAALRSCVRLAGRPQLAAALAEEALRDL 128 R + GGP + PR RR L A+ R G L A E L++ Sbjct: 219 -----GGCRRQRRGGP---VAPRARRLRLSASR-------RAGGSRGLGARRLERRLKES 263 Query: 129 LAGW 132 L W Sbjct: 264 LQNW 267 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,173,876 Number of Sequences: 37866 Number of extensions: 2631875 Number of successful extensions: 7471 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 40 Number of HSP's that attempted gapping in prelim test: 7431 Number of HSP's gapped (non-prelim): 79 length of query: 1621 length of database: 18,247,518 effective HSP length: 116 effective length of query: 1505 effective length of database: 13,855,062 effective search space: 20851868310 effective search space used: 20851868310 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.