| Name: LOC343052 | Sequence: fasta or formatted (654aa) | NCBI GI: 169162264 | |
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Description: PREDICTED: similar to hCG1996527
| Not currently referenced in the text | ||
Other entries for this name:
alt prot {654aa} PREDICTED: similar to hCG1996527 alt prot {654aa} PREDICTED: similar to hCG1996527 | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.3 54 2 C cysteine 3.1 20 1 D aspartate 2.6 17 1 E glutamate 5.2 34 1 F phenylalanine 1.5 10 1 G glycine 9.2 60 2 H histidine 3.5 23 1 I isoleucine 3.8 25 2 K lysine 1.2 8 1 L leucine 12.2 80 6 M methionine 1.1 7 1 N asparagine 3.5 23 2 P proline 7.5 49 2 Q glutamine 4.9 32 1 R arginine 5.0 33 2 S serine 10.6 69 2 T threonine 5.0 33 1 V valine 8.3 54 3 W tryptophan 2.0 13 1 Y tyrosine 1.5 10 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1996527 LOC343052 0.997 PREDICTED: similar to hCG1996527 LOC343052 0.995 PREDICTED: similar to hCG1996527 IGDCC3 0.381 putative neuronal cell adhesion molecule PRTG 0.233 protogenin IGDCC4 0.168 immunoglobulin superfamily, DCC subclass, member 4 [... NEO1 0.124 neogenin homolog 1 DCC 0.114 deleted in colorectal carcinoma ROBO1 0.090 roundabout 1 isoform d ROBO1 0.090 roundabout 1 isoform c LOC642132 0.090 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.090 PREDICTED: similar to roundabout 1 isoform 2 ROBO1 0.087 roundabout 1 isoform b ROBO1 0.087 roundabout 1 isoform a HMCN2 0.087 PREDICTED: hemicentin 2 HMCN2 0.087 PREDICTED: hemicentin 2 HMCN2 0.087 PREDICTED: hemicentin 2 ROBO2 0.085 roundabout, axon guidance receptor, homolog 2 isofo... ROBO3 0.085 roundabout, axon guidance receptor, homolog 3 ROBO2 0.084 roundabout, axon guidance receptor, homolog 2 isofor... PXDN 0.078 peroxidasin HMCN1 0.075 hemicentin 1 PTK7 0.075 PTK7 protein tyrosine kinase 7 isoform b precursor [... PXDNL 0.071 peroxidasin homolog-like BOC 0.071 brother of CDO CNTN4 0.066 contactin 4 isoform a precursor LOC100292387 0.065 PREDICTED: similar to hemicentin 2 CNTN5 0.063 contactin 5 isoform long CNTN5 0.063 contactin 5 isoform short PTPRS 0.063 protein tyrosine phosphatase, receptor type, sigma ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
