BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169161355 PREDICTED: similar to hCG2036949 [Homo sapiens] (340 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169160681 PREDICTED: similar to hCG2036949 [Homo sapiens] 696 0.0 gi|169161650 PREDICTED: similar to hCG2036949 [Homo sapiens] 696 0.0 gi|169161355 PREDICTED: similar to hCG2036949 [Homo sapiens] 696 0.0 gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 30 3.1 gi|223029426 solute carrier family 35, member D2 [Homo sapiens] 29 5.3 gi|44680148 solute carrier family 23 (nucleobase transporters), ... 29 6.9 gi|40316845 solute carrier family 23 (nucleobase transporters), ... 29 6.9 gi|13375616 fatty acid desaturase 3 [Homo sapiens] 29 6.9 gi|38505290 voltage-dependent calcium channel alpha 1G subunit i... 29 6.9 gi|38505288 voltage-dependent calcium channel alpha 1G subunit i... 29 6.9 gi|38505286 voltage-dependent calcium channel alpha 1G subunit i... 29 6.9 gi|38505282 voltage-dependent calcium channel alpha 1G subunit i... 29 6.9 gi|38505278 voltage-dependent calcium channel alpha 1G subunit i... 29 6.9 gi|38505272 voltage-dependent calcium channel alpha 1G subunit i... 29 6.9 gi|38505268 voltage-dependent calcium channel alpha 1G subunit i... 29 6.9 gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens] 29 6.9 gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens] 29 6.9 gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens] 28 9.0 gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens] 28 9.0 gi|187829623 GC-rich promoter binding protein 1 isoform 2 [Homo ... 28 9.0 >gi|169160681 PREDICTED: similar to hCG2036949 [Homo sapiens] Length = 340 Score = 696 bits (1797), Expect = 0.0 Identities = 340/340 (100%), Positives = 340/340 (100%) Query: 1 MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60 MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG Sbjct: 1 MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60 Query: 61 HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120 HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP Sbjct: 61 HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120 Query: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS Sbjct: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180 Query: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL Sbjct: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240 Query: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC Sbjct: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300 Query: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK Sbjct: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340 >gi|169161650 PREDICTED: similar to hCG2036949 [Homo sapiens] Length = 340 Score = 696 bits (1797), Expect = 0.0 Identities = 340/340 (100%), Positives = 340/340 (100%) Query: 1 MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60 MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG Sbjct: 1 MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60 Query: 61 HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120 HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP Sbjct: 61 HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120 Query: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS Sbjct: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180 Query: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL Sbjct: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240 Query: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC Sbjct: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300 Query: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK Sbjct: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340 >gi|169161355 PREDICTED: similar to hCG2036949 [Homo sapiens] Length = 340 Score = 696 bits (1797), Expect = 0.0 Identities = 340/340 (100%), Positives = 340/340 (100%) Query: 1 MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60 MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG Sbjct: 1 MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60 Query: 61 HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120 HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP Sbjct: 61 HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120 Query: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS Sbjct: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180 Query: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL Sbjct: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240 Query: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC Sbjct: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300 Query: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK Sbjct: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340 >gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] Length = 2063 Score = 30.0 bits (66), Expect = 3.1 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 9/124 (7%) Query: 23 SDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQ--D 80 +D+++ P +T + + G+ R + G D + +LT AC+ Sbjct: 1779 ADQNTLPSSQSTTMVSPLLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGS 1838 Query: 81 LEAPQLQPCA---SEGVNLDCGTTGLPGTTSLSSQPFVSDKGPP----LRWEKGPIPPAF 133 LE + Q A +EG LD GL GT LS++ PP L+ P+ P Sbjct: 1839 LEKGEEQYGADGETEGQGLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGT 1898 Query: 134 WAMG 137 + G Sbjct: 1899 ASAG 1902 >gi|223029426 solute carrier family 35, member D2 [Homo sapiens] Length = 337 Score = 29.3 bits (64), Expect = 5.3 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Query: 216 CSKLGAELNDFAVFTTFGLASALLLGVDGLLSGILAIIYVSAAS--FHLCFYSPGVPSTY 273 CS L +N A+ TT+G S + LG+ G ++ + I+YVS + H + +P Sbjct: 37 CSFLIVLVNK-ALLTTYGFPSPIFLGI-GQMAATIMILYVSKLNKIIHFPDFDKKIPVKL 94 Query: 274 KGLPCPYASCILASTSLLTK 293 LP Y ++ S +K Sbjct: 95 FPLPLLYVGNHISGLSSTSK 114 >gi|44680148 solute carrier family 23 (nucleobase transporters), member 2 [Homo sapiens] Length = 650 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 22/102 (21%) Query: 232 FGLASALLLGVDGLLSGILAIIYVSAASFHLCFY-----SPGVPSTYKGLPCPYASCIL- 285 +GL + GV G+LS ++A I S ++ C P + + +G+ SC+L Sbjct: 370 WGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLD 429 Query: 286 -------ASTSL--------LTK-GNRFILCCMASLMILFMM 311 STS +TK G+R ++ C A+LM+ M Sbjct: 430 GIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALMLALGM 471 >gi|40316845 solute carrier family 23 (nucleobase transporters), member 2 [Homo sapiens] Length = 650 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 22/102 (21%) Query: 232 FGLASALLLGVDGLLSGILAIIYVSAASFHLCFY-----SPGVPSTYKGLPCPYASCIL- 285 +GL + GV G+LS ++A I S ++ C P + + +G+ SC+L Sbjct: 370 WGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLD 429 Query: 286 -------ASTSL--------LTK-GNRFILCCMASLMILFMM 311 STS +TK G+R ++ C A+LM+ M Sbjct: 430 GIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALMLALGM 471 >gi|13375616 fatty acid desaturase 3 [Homo sapiens] Length = 445 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/66 (27%), Positives = 31/66 (46%) Query: 127 GPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFSIIFSFS 186 G +P A A L S+ S+ L HD H+ I + SW + + + + G + ++F Sbjct: 159 GWVPSALAAFILAISQAQSWCLQHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFR 218 Query: 187 RKCHYA 192 H+A Sbjct: 219 HFQHHA 224 >gi|38505290 voltage-dependent calcium channel alpha 1G subunit isoform 13 [Homo sapiens] Length = 2243 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 41 HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100 HS G + + P+ L PA + + LE P +QP +E D T Sbjct: 1842 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1901 Query: 101 ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152 +G+ T SL + ++ G +GP+ W GL +++ S H Q Sbjct: 1902 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1951 >gi|38505288 voltage-dependent calcium channel alpha 1G subunit isoform 12 [Homo sapiens] Length = 2250 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 41 HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100 HS G + + P+ L PA + + LE P +QP +E D T Sbjct: 1849 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1908 Query: 101 ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152 +G+ T SL + ++ G +GP+ W GL +++ S H Q Sbjct: 1909 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1958 >gi|38505286 voltage-dependent calcium channel alpha 1G subunit isoform 10 [Homo sapiens] Length = 2266 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 41 HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100 HS G + + P+ L PA + + LE P +QP +E D T Sbjct: 1865 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1924 Query: 101 ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152 +G+ T SL + ++ G +GP+ W GL +++ S H Q Sbjct: 1925 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1974 >gi|38505282 voltage-dependent calcium channel alpha 1G subunit isoform 8 [Homo sapiens] Length = 2284 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 41 HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100 HS G + + P+ L PA + + LE P +QP +E D T Sbjct: 1883 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1942 Query: 101 ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152 +G+ T SL + ++ G +GP+ W GL +++ S H Q Sbjct: 1943 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1992 >gi|38505278 voltage-dependent calcium channel alpha 1G subunit isoform 11 [Homo sapiens] Length = 2261 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 41 HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100 HS G + + P+ L PA + + LE P +QP +E D T Sbjct: 1860 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1919 Query: 101 ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152 +G+ T SL + ++ G +GP+ W GL +++ S H Q Sbjct: 1920 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1969 >gi|38505272 voltage-dependent calcium channel alpha 1G subunit isoform 9 [Homo sapiens] Length = 2273 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 41 HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100 HS G + + P+ L PA + + LE P +QP +E D T Sbjct: 1872 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1931 Query: 101 ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152 +G+ T SL + ++ G +GP+ W GL +++ S H Q Sbjct: 1932 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1981 >gi|38505268 voltage-dependent calcium channel alpha 1G subunit isoform 14 [Homo sapiens] Length = 2171 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 41 HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100 HS G + + P+ L PA + + LE P +QP +E D T Sbjct: 1849 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1908 Query: 101 ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152 +G+ T SL + ++ G +GP+ W GL +++ S H Q Sbjct: 1909 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1958 >gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens] Length = 408 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 29 PLLNTTVPATGCHSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDL 81 P L V G +F + NP +G+V T H +P +T A NQ L Sbjct: 219 PRLRNKVEVDGPELKFNAPVTVADKNNPKYTGNVFTPH-FPTAMTSATLNQPL 270 >gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens] Length = 598 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 29 PLLNTTVPATGCHSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDL 81 P L V G +F + NP +G+V T H +P +T A NQ L Sbjct: 409 PRLRNKVEVDGPELKFNAPVTVADKNNPKYTGNVFTPH-FPTAMTSATLNQPL 460 >gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens] Length = 209 Score = 28.5 bits (62), Expect = 9.0 Identities = 15/43 (34%), Positives = 25/43 (58%) Query: 212 HINICSKLGAELNDFAVFTTFGLASALLLGVDGLLSGILAIIY 254 HI + L F V+ G+ +A++LG+ L+S ILA++Y Sbjct: 149 HIRLYVVEKENLPVFPVWVVVGIVTAVVLGLTLLISMILAVLY 191 >gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens] Length = 269 Score = 28.5 bits (62), Expect = 9.0 Identities = 15/43 (34%), Positives = 25/43 (58%) Query: 212 HINICSKLGAELNDFAVFTTFGLASALLLGVDGLLSGILAIIY 254 HI + L F V+ G+ +A++LG+ L+S ILA++Y Sbjct: 149 HIRLYVVEKENLPVFPVWVVVGIVTAVVLGLTLLISMILAVLY 191 >gi|187829623 GC-rich promoter binding protein 1 isoform 2 [Homo sapiens] Length = 493 Score = 28.5 bits (62), Expect = 9.0 Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 24/118 (20%) Query: 50 YERLRNPNGS------GHVATDHLWP------AVLTGACQNQDLEAPQLQPCASEGVNLD 97 YER N N S G A H +P A L N AP++ +G D Sbjct: 144 YEREPNHNKSLAAGVWGLHAQTHTYPTKKISQAPLLEYPPNPKSRAPRML-VIKKGNTKD 202 Query: 98 CGTTGLPGTTSLSSQPFVSDKGPPLRWEKGPIP--------PAFWAMGLQESK-GTSF 146 +G P +L SQP + GP + KG +P P W +E+K GTSF Sbjct: 203 LQLSGFPVVGNLPSQPVKNGTGPSV--YKGLVPKPAAPPTKPTQWKSQTKENKVGTSF 258 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.136 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,753,221 Number of Sequences: 37866 Number of extensions: 633310 Number of successful extensions: 1504 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 1498 Number of HSP's gapped (non-prelim): 20 length of query: 340 length of database: 18,247,518 effective HSP length: 103 effective length of query: 237 effective length of database: 14,347,320 effective search space: 3400314840 effective search space used: 3400314840 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.