Guide to the Human Genome
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Name: EIF4G2 Sequence: fasta or formatted (869aa) NCBI GI: 110630018
Description:

eukaryotic translation initiation factor 4 gamma, 2 isoform 2

Referenced in:

Small RNAs in RNA Processing
Translation Factors

Other entries for this name:
alt prot [907aa] eukaryotic translation initiation factor 4 gamma, 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         51           2
 C cysteine            1.0          9           1
 D aspartate           4.9         43           2
 E glutamate           8.2         71           4
 F phenylalanine       4.7         41           2
 G glycine             6.0         52           4
 H histidine           2.0         17           2
 I isoleucine          5.3         46           2
 K lysine              8.1         70           3
 L leucine            12.3        107           3
 M methionine          3.5         30           1
 N asparagine          3.9         34           2
 P proline             6.8         59           3
 Q glutamine           6.3         55           2
 R arginine            4.6         40           2
 S serine              6.8         59           3
 T threonine           3.7         32           2
 V valine              3.9         34           2
 W tryptophan          0.8          7           1
 Y tyrosine            1.4         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 4 gamma, 2... 
EIF4G2                0.989   eukaryotic translation initiation factor 4 gamma, 2 i...
EIF4G1                0.100   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.100   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.100   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.100   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.100   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G3                0.097   eukaryotic translation initiation factor 4 gamma, 3 ...
BZW2                  0.016   basic leucine zipper and W2 domains 2 
BZW2                  0.016   basic leucine zipper and W2 domains 2 
PDCD4                 0.014   programmed cell death 4 isoform 2 
PDCD4                 0.014   programmed cell death 4 isoform 1 
EIF2B5                0.012   eukaryotic translation initiation factor 2B, subunit...
PAIP1                 0.011   poly(A) binding protein interacting protein 1 isofor...
PAIP1                 0.011   poly(A) binding protein interacting protein 1 isofor...
PAIP1                 0.011   poly(A) binding protein interacting protein 1 isofor...
BZW1                  0.009   basic leucine zipper and W2 domains 1 
KIAA0427              0.009   hypothetical protein LOC9811 isoform 1 
SYNJ1                 0.009   synaptojanin 1 isoform c 
SYNJ1                 0.009   synaptojanin 1 isoform a 
SYNJ1                 0.009   synaptojanin 1 isoform b 
LOC645139             0.009   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.009   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.009   PREDICTED: similar to poly(A) binding protein intera...
SYNJ1                 0.009   synaptojanin 1 isoform d 
KIAA0427              0.008   hypothetical protein LOC9811 isoform 2 
CPEB3                 0.008   cytoplasmic polyadenylation element binding protein ...
SEC24D                0.008   Sec24-related protein D 
EIF5                  0.008   eukaryotic translation initiation factor 5 
EIF5                  0.008   eukaryotic translation initiation factor 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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