Guide to the Human Genome
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Name: KIAA0427 Sequence: fasta or formatted (600aa) NCBI GI: 215422401
Description:

hypothetical protein LOC9811 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {598aa} hypothetical protein LOC9811 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         33           2
 C cysteine            1.7         10           2
 D aspartate           5.8         35           1
 E glutamate           8.7         52           2
 F phenylalanine       2.8         17           1
 G glycine             6.2         37           2
 H histidine           3.3         20           2
 I isoleucine          3.5         21           1
 K lysine              5.7         34           2
 L leucine             9.2         55           3
 M methionine          3.0         18           2
 N asparagine          3.8         23           2
 P proline             6.2         37           2
 Q glutamine           6.0         36           3
 R arginine            7.2         43           4
 S serine              8.7         52           2
 T threonine           6.5         39           3
 V valine              3.7         22           1
 W tryptophan          1.2          7           1
 Y tyrosine            1.5          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC9811 isoform 2 
KIAA0427              0.992   hypothetical protein LOC9811 isoform 1 
MIF4GD                0.060   MIF4G domain containing 
LOC645139             0.042   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.042   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.042   PREDICTED: similar to poly(A) binding protein intera...
PAIP1                 0.042   poly(A) binding protein interacting protein 1 isofor...
PAIP1                 0.042   poly(A) binding protein interacting protein 1 isofor...
PAIP1                 0.042   poly(A) binding protein interacting protein 1 isofor...
EIF4G1                0.020   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.020   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.020   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.020   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.020   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G3                0.016   eukaryotic translation initiation factor 4 gamma, 3 ...
EIF4G2                0.012   eukaryotic translation initiation factor 4 gamma, 2...
EIF4G2                0.012   eukaryotic translation initiation factor 4 gamma, 2 i...
CREB5                 0.010   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.010   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.010   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.010   cAMP responsive element binding protein 5 isoform al...
ACRV1                 0.010   acrosomal vesicle protein 1 isoform a precursor [Homo...
SRRM1                 0.010   serine/arginine repetitive matrix 1 
SYNGAP1               0.010   synaptic Ras GTPase activating protein 1 
LOC100293596          0.008   PREDICTED: similar to mucin 
BAT2D1                0.008   HBxAg transactivated protein 2 
HTR1A                 0.008   5-hydroxytryptamine (serotonin) receptor 1A 
TGOLN2                0.008   trans-golgi network protein 2 
ACRV1                 0.008   acrosomal vesicle protein 1 isoform b precursor [Homo...
EIF3A                 0.008   eukaryotic translation initiation factor 3, subunit 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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