Guide to the Human Genome
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Name: ADAMTS17 Sequence: fasta or formatted (1095aa) NCBI GI: 110611170
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 17 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         74           3
 C cysteine            6.0         66           2
 D aspartate           5.3         58           3
 E glutamate           5.3         58           2
 F phenylalanine       2.0         22           1
 G glycine             8.6         94           3
 H histidine           3.3         36           2
 I isoleucine          2.6         29           2
 K lysine              4.7         51           3
 L leucine             8.7         95           4
 M methionine          1.5         16           1
 N asparagine          3.1         34           2
 P proline             7.1         78           3
 Q glutamine           4.4         48           2
 R arginine            7.6         83           5
 S serine              6.8         74           2
 T threonine           5.3         58           3
 V valine              6.5         71           3
 W tryptophan          2.4         26           1
 Y tyrosine            2.2         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mo... 
ADAMTS19              0.542   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS7               0.239   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.236   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.223   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.223   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.217   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.216   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS20              0.185   a disintegrin-like and metalloprotease with thrombo...
ADAMTS2               0.182   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS9               0.179   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.175   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.174   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS3               0.173   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS15              0.165   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS1               0.162   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS5               0.149   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS8               0.138   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.136   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.136   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS4               0.135   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.127   ADAM metallopeptidase with thrombospondin type 1 mot...
PAPLN                 0.119   papilin 
ADAMTSL3              0.096   ADAMTS-like 3 precursor 
ADAMTSL1              0.094   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.087   ADAMTS-like 1 isoform 2 precursor 
ADAMTSL4              0.086   thrombospondin repeat containing 1 isoform 1 
ADAMTSL4              0.076   thrombospondin repeat containing 1 isoform 2 
ADAMTS2               0.075   ADAM metallopeptidase with thrombospondin type 1 mot...
THSD4                 0.067   thrombospondin, type I, domain containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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