Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ADAMTS2 Sequence: fasta or formatted (566aa) NCBI GI: 11038659
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 2 isoform 2

Referenced in:

Collagen
Metalloproteases

Other entries for this name:
alt prot [1211aa] ADAM metallopeptidase with thrombospondin type 1 motif, 2 isoform...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         54           4
 C cysteine            2.8         16           1
 D aspartate           5.3         30           3
 E glutamate           5.5         31           4
 F phenylalanine       3.4         19           2
 G glycine             9.2         52           2
 H histidine           4.6         26           1
 I isoleucine          2.5         14           2
 K lysine              1.9         11           2
 L leucine            11.5         65           8
 M methionine          2.3         13           2
 N asparagine          2.8         16           1
 P proline             8.3         47           6
 Q glutamine           3.5         20           2
 R arginine            6.9         39           3
 S serine              6.2         35           2
 T threonine           3.5         20           2
 V valine              6.4         36           2
 W tryptophan          1.1          6           1
 Y tyrosine            2.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mot... 
ADAMTS2               0.956   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.564   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.533   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.523   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.194   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS7               0.186   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.185   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS18              0.183   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS9               0.179   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.171   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS15              0.157   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS20              0.156   a disintegrin-like and metalloprotease with thrombo...
ADAMTS12              0.153   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS17              0.152   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.139   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS8               0.138   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS1               0.130   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS5               0.122   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS4               0.113   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.100   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.100   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.087   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAM8                 0.071   ADAM metallopeptidase domain 8 precursor 
ADAM19                0.062   ADAM metallopeptidase domain 19 preproprotein 
ADAM28                0.049   ADAM metallopeptidase domain 28 isoform 3 preproprot...
ADAM28                0.049   ADAM metallopeptidase domain 28 isoform 1 preproprot...
ADAM12                0.047   ADAM metallopeptidase domain 12 isoform 2 preproprot...
ADAM12                0.047   ADAM metallopeptidase domain 12 isoform 1 preproprot...
ADAM7                 0.046   a disintegrin and metalloproteinase domain 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press