Guide to the Human Genome
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Name: ADAMTS3 Sequence: fasta or formatted (1205aa) NCBI GI: 21265037
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 3 proprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         63           3
 C cysteine            4.6         56           2
 D aspartate           5.7         69           2
 E glutamate           6.4         77           3
 F phenylalanine       2.8         34           2
 G glycine             7.1         86           3
 H histidine           4.2         51           2
 I isoleucine          4.3         52           2
 K lysine              5.5         66           2
 L leucine             6.7         81           2
 M methionine          2.2         27           1
 N asparagine          4.7         57           2
 P proline             5.9         71           3
 Q glutamine           4.4         53           3
 R arginine            6.1         73           4
 S serine              8.0         96           2
 T threonine           5.1         62           1
 V valine              5.9         71           2
 W tryptophan          1.5         18           1
 Y tyrosine            3.5         42           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mot... 
ADAMTS2               0.539   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.537   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.532   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.257   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.208   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.202   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.193   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS7               0.187   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.181   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.178   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS9               0.176   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.170   a disintegrin-like and metalloprotease with thrombo...
ADAMTS19              0.163   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS17              0.159   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS15              0.153   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS1               0.146   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS5               0.139   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS8               0.138   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.118   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.118   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS4               0.114   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.113   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL1              0.082   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.082   ADAMTS-like 1 isoform 2 precursor 
PAPLN                 0.081   papilin 
ADAMTSL3              0.075   ADAMTS-like 3 precursor 
THSD4                 0.063   thrombospondin, type I, domain containing 4 
ADAMTSL4              0.061   thrombospondin repeat containing 1 isoform 1 
ADAMTSL4              0.060   thrombospondin repeat containing 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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