Guide to the Human Genome
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Name: GAS1 Sequence: fasta or formatted (345aa) NCBI GI: 167466169
Description:

growth arrest-specific 1

Referenced in:

Additional Cell Cycle Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         42           5
 C cysteine            6.1         21           1
 D aspartate           6.4         22           4
 E glutamate           4.9         17           1
 F phenylalanine       1.4          5           1
 G glycine            15.7         54           4
 H histidine           1.4          5           1
 I isoleucine          2.0          7           1
 K lysine              1.4          5           1
 L leucine            11.0         38           5
 M methionine          1.7          6           1
 N asparagine          2.3          8           1
 P proline             7.0         24           2
 Q glutamine           2.9         10           1
 R arginine            7.8         27           3
 S serine              6.4         22           2
 T threonine           2.9         10           1
 V valine              2.6          9           1
 W tryptophan          1.2          4           1
 Y tyrosine            2.6          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth arrest-specific 1 
MPND                  0.026   MPN domain containing isoform 2 
MPND                  0.026   MPN domain containing isoform 1 
PPP1R10               0.017   protein phosphatase 1, regulatory subunit 10 
CTAG1B                0.017   cancer/testis antigen 1B 
GPC2                  0.017   glypican 2 
CTAG1A                0.017   cancer/testis antigen 1A 
PHOX2B                0.017   paired-like homeobox 2b 
HNRNPR                0.017   heterogeneous nuclear ribonucleoprotein R isoform 3...
HNRNPR                0.017   heterogeneous nuclear ribonucleoprotein R isoform 1...
HNRNPR                0.017   heterogeneous nuclear ribonucleoprotein R isoform 4...
HNRNPR                0.017   heterogeneous nuclear ribonucleoprotein R isoform 2 [...
ARIH1                 0.016   ariadne ubiquitin-conjugating enzyme E2 binding pro...
KRT2                  0.016   keratin 2 
KIF26B                0.016   kinesin family member 26B 
FUS                   0.014   fusion (involved in t(12;16) in malignant liposarcoma...
COL3A1                0.014   collagen type III alpha 1 preproprotein 
ZBED3                 0.014   zinc finger, BED-type containing 3 
SAPS1                 0.014   SAPS domain family, member 1 
CACNA1A               0.014   calcium channel, alpha 1A subunit isoform 4 
EVX2                  0.013   even-skipped homeobox 2 
BRD2                  0.013   bromodomain containing 2 
BRD2                  0.013   bromodomain containing 2 
NOVA2                 0.013   neuro-oncological ventral antigen 2 
FOXD1                 0.013   forkhead box D1 
HNRNPA3               0.013   heterogeneous nuclear ribonucleoprotein A3 
PYGO2                 0.013   pygopus homolog 2 
ANKRD17               0.013   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.013   ankyrin repeat domain protein 17 isoform b 
KRT1                  0.013   keratin 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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