Guide to the Human Genome
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Name: CARD9 Sequence: fasta or formatted (492aa) NCBI GI: 16554562
Description:

caspase recruitment domain protein 9 isoform 2

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [536aa] caspase recruitment domain protein 9 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         34           2
 C cysteine            2.0         10           1
 D aspartate           6.7         33           2
 E glutamate          11.2         55           2
 F phenylalanine       1.6          8           1
 G glycine             4.7         23           3
 H histidine           2.2         11           1
 I isoleucine          3.0         15           2
 K lysine              7.1         35           2
 L leucine            14.6         72           2
 M methionine          2.4         12           1
 N asparagine          1.4          7           1
 P proline             3.0         15           1
 Q glutamine           8.5         42           2
 R arginine            8.3         41           2
 S serine              5.7         28           2
 T threonine           2.6         13           1
 V valine              5.3         26           1
 W tryptophan          0.6          3           1
 Y tyrosine            1.8          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   caspase recruitment domain protein 9 isoform 2 [Homo... 
CARD9                 0.976   caspase recruitment domain protein 9 isoform 1 [Homo...
CARD11                0.367   caspase recruitment domain family, member 11 
CARD10                0.274   caspase recruitment domain protein 10 
CARD14                0.165   caspase recruitment domain protein 14 isoform 1 [Hom...
CARD14                0.057   caspase recruitment domain protein 14 isoform 2 [Hom...
LOC283767             0.050   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.047   PREDICTED: Putative golgin subfamily A member 6-lik...
FYCO1                 0.046   FYVE and coiled-coil domain containing 1 
PMFBP1                0.043   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.043   polyamine modulated factor 1 binding protein 1 isof...
CGNL1                 0.043   cingulin-like 1 
MYH9                  0.043   myosin, heavy polypeptide 9, non-muscle 
MYH3                  0.043   myosin, heavy chain 3, skeletal muscle, embryonic [H...
LOC727832             0.041   golgi autoantigen, golgin subfamily a-like 
ROCK1                 0.041   Rho-associated, coiled-coil containing protein kinase...
LOC283685             0.041   PREDICTED: golgi autoantigen, golgin subfamily a-li...
GOLGB1                0.041   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH10                 0.041   myosin, heavy polypeptide 10, non-muscle 
NUMA1                 0.040   nuclear mitotic apparatus protein 1 
MYH2                  0.040   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.040   myosin, heavy chain 2, skeletal muscle, adult [Homo...
EEA1                  0.039   early endosome antigen 1, 162kD 
GCC2                  0.039   GRIP and coiled-coil domain-containing 2 
MYH11                 0.039   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.039   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.039   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.039   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CCDC88B               0.039   coiled-coil domain containing 88 
MYH8                  0.038   myosin, heavy chain 8, skeletal muscle, perinatal [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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