Guide to the Human Genome
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Name: METT5D1 Sequence: fasta or formatted (273aa) NCBI GI: 165377202
Description:

methyltransferase 5 domain containing 1 isoform 2

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [407aa] methyltransferase 5 domain containing 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         25           2
 C cysteine            1.8          5           1
 D aspartate           6.2         17           1
 E glutamate           6.6         18           2
 F phenylalanine       2.9          8           1
 G glycine             5.9         16           2
 H histidine           2.6          7           1
 I isoleucine          4.8         13           1
 K lysine              4.4         12           2
 L leucine             9.9         27           2
 M methionine          4.4         12           1
 N asparagine          1.1          3           1
 P proline             5.1         14           1
 Q glutamine           7.0         19           2
 R arginine            5.9         16           1
 S serine              5.9         16           2
 T threonine           5.9         16           2
 V valine              4.8         13           2
 W tryptophan          0.7          2           1
 Y tyrosine            5.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   methyltransferase 5 domain containing 1 isoform 2 [... 
METT5D1               0.945   methyltransferase 5 domain containing 1 isoform 1 [...
NSUN6                 0.019   NOL1/NOP2/Sun domain family, member 6 
NSUN4                 0.013   NOL1/NOP2/Sun domain family 4 protein 
GANC                  0.011   glucosidase, alpha; neutral C 
KDM6B                 0.008   lysine (K)-specific demethylase 6B 
NOP2                  0.008   nucleolar protein 1, 120kDa 
NOP2                  0.008   nucleolar protein 1, 120kDa 
UTY                   0.008   tetratricopeptide repeat protein isoform 3 
UTY                   0.008   tetratricopeptide repeat protein isoform 2 
PNN                   0.006   pinin, desmosome associated protein 
DIMT1L                0.006   dimethyladenosine transferase 
KDM6A                 0.006   ubiquitously transcribed tetratricopeptide repeat, ...
NSUN3                 0.006   NOL1/NOP2/Sun domain family, member 3 
C1orf168              0.006   hypothetical protein LOC199920 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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