Guide to the Human Genome
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Name: NSUN4 Sequence: fasta or formatted (384aa) NCBI GI: 40316918
Description:

NOL1/NOP2/Sun domain family 4 protein

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         33           2
 C cysteine            2.6         10           2
 D aspartate           4.9         19           1
 E glutamate           5.2         20           3
 F phenylalanine       4.2         16           2
 G glycine             6.0         23           2
 H histidine           2.3          9           1
 I isoleucine          3.1         12           1
 K lysine              4.2         16           3
 L leucine            12.5         48           2
 M methionine          2.1          8           1
 N asparagine          3.6         14           2
 P proline             5.2         20           2
 Q glutamine           4.9         19           1
 R arginine            7.0         27           2
 S serine              7.0         27           2
 T threonine           4.2         16           2
 V valine              7.6         29           2
 W tryptophan          1.8          7           1
 Y tyrosine            2.9         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NOL1/NOP2/Sun domain family 4 protein 
NSUN3                 0.196   NOL1/NOP2/Sun domain family, member 3 
NOP2                  0.074   nucleolar protein 1, 120kDa 
NOP2                  0.074   nucleolar protein 1, 120kDa 
NSUN6                 0.057   NOL1/NOP2/Sun domain family, member 6 
NSUN2                 0.056   NOL1/NOP2/Sun domain family, member 2 
NSUN5                 0.032   NOL1/NOP2/Sun domain family, member 5 isoform 1 [Hom...
NSUN5                 0.032   NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo...
METT5D1               0.009   methyltransferase 5 domain containing 1 isoform 1 [...
METT5D1               0.009   methyltransferase 5 domain containing 1 isoform 2 [...
SHROOM2               0.008   apical protein of Xenopus-like 
TSC22D2               0.007   TSC22 domain family, member 2 
NDEL1                 0.005   nudE nuclear distribution gene E homolog (A. nidulan...
NSUN7                 0.005   NOL1/NOP2/Sun domain family, member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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