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Search of human proteins with 163914394
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|163914394 DEAQ box polypeptide 1 (RNA-dependent ATPase)
[Homo sapiens]
(717 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|163914394 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo... 1446 0.0
gi|20336300 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom... 577 e-164
gi|68509926 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Homo sapi... 435 e-122
gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens] 307 3e-83
gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo sapi... 295 1e-79
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens] 291 1e-78
gi|20544129 DEAH (Asp-Glu-Ala-His) box polypeptide 35 [Homo sapi... 285 1e-76
gi|31542729 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Homo sapi... 260 4e-69
gi|20336302 DEAH (Asp-Glu-Ala-His) box polypeptide 33 [Homo sapi... 259 5e-69
gi|38158022 DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Homo sapi... 206 8e-53
gi|169211440 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po... 169 1e-41
gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1... 141 2e-33
gi|20336290 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ... 141 2e-33
gi|20336294 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ... 141 2e-33
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2... 137 3e-32
gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapi... 116 6e-26
gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapi... 93 1e-18
gi|67782362 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Homo sapi... 91 5e-18
gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo ... 88 3e-17
gi|38505213 YTH domain containing 2 [Homo sapiens] 86 1e-16
gi|166851804 tudor domain containing 9 [Homo sapiens] 73 8e-13
gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo... 32 1.6
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 31 3.5
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 31 3.5
gi|11345454 Fanconi anemia, complementation group E [Homo sapiens] 31 3.5
gi|23397678 signal transducer and activator of transcription 6 [... 31 4.6
gi|45827729 scribble isoform b [Homo sapiens] 30 7.8
gi|45827731 scribble isoform a [Homo sapiens] 30 7.8
gi|169234951 coiled-coil domain containing 17 [Homo sapiens] 30 7.8
>gi|163914394 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo
sapiens]
Length = 717
Score = 1446 bits (3743), Expect = 0.0
Identities = 717/717 (100%), Positives = 717/717 (100%)
Query: 1 MTSQPLRLAEEYGPSPGESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLES 60
MTSQPLRLAEEYGPSPGESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLES
Sbjct: 1 MTSQPLRLAEEYGPSPGESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLES 60
Query: 61 NPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVTQPYPLAARSLALRVADEMD 120
NPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVTQPYPLAARSLALRVADEMD
Sbjct: 61 NPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVTQPYPLAARSLALRVADEMD 120
Query: 121 LTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASD 180
LTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASD
Sbjct: 121 LTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASD 180
Query: 181 SLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTI 240
SLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTI
Sbjct: 181 SLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTI 240
Query: 241 PPDRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPL 300
PPDRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPL
Sbjct: 241 PPDRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPL 300
Query: 301 HPDCGRAVQAVYEDMDARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQV 360
HPDCGRAVQAVYEDMDARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQV
Sbjct: 301 HPDCGRAVQAVYEDMDARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQV 360
Query: 361 LRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRR 420
LRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRR
Sbjct: 361 LRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRR 420
Query: 421 QIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLA 480
QIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLA
Sbjct: 421 QIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLA 480
Query: 481 SCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRRALEHTDGDHSSLIQVYEAFIQSG 540
SCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRRALEHTDGDHSSLIQVYEAFIQSG
Sbjct: 481 SCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRRALEHTDGDHSSLIQVYEAFIQSG 540
Query: 541 ADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYF 600
ADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYF
Sbjct: 541 ADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYF 600
Query: 601 LKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVS 660
LKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVS
Sbjct: 601 LKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVS 660
Query: 661 EIQPQMLVELAPPYFLSNLPPSESRDLLNQLREGMADSTAGSKSSSAQEFRDPCVLQ 717
EIQPQMLVELAPPYFLSNLPPSESRDLLNQLREGMADSTAGSKSSSAQEFRDPCVLQ
Sbjct: 661 EIQPQMLVELAPPYFLSNLPPSESRDLLNQLREGMADSTAGSKSSSAQEFRDPCVLQ 717
>gi|20336300 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Homo
sapiens]
Length = 743
Score = 577 bits (1486), Expect = e-164
Identities = 317/727 (43%), Positives = 468/727 (64%), Gaps = 49/727 (6%)
Query: 20 ELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQ 79
+L +NPFDGLP+SSRYY+LLK+R+ LPIW +++F+E L N +V+VSG+ GKS Q
Sbjct: 37 DLELNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQNQ--IVIVSGDAKCGKSAQ 94
Query: 80 IPQWCAEFALARGFQKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGP 139
+PQWCAE+ L+ +Q G V TQ + LALRVADEMD+ +GHEVGY IP E+C
Sbjct: 95 VPQWCAEYCLSIHYQHGGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTN 154
Query: 140 NTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLR 199
T+LR+C D +L +E+ S G++GV++LD+ ERS+A+D L GLL+D L + +L+
Sbjct: 155 ETILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLAR--PELK 212
Query: 200 VVVVTDPALEPKLRAFWGNPPIVHIP-REPGERPSPIYWDTIPPDRVEAACQAVLELCRK 258
+++ + P L KL +++GN P++ + + P E +Y D E+ + + E+
Sbjct: 213 LIINSSPHLISKLNSYYGNVPVIEVKNKHPVE---VVYLSEAQKDSFESILRLIFEIHHS 269
Query: 259 ELPGDVLVFLPSEEEISLCCES------LSREVESLLLQGLPPRVLPLHPDCGRAVQAVY 312
GD++VFL E++I CE+ L+ ++ L+ V+PL+P + +++
Sbjct: 270 GEKGDIVVFLACEQDIEKVCETVYQGSNLNPDLGELV-------VVPLYP---KEKCSLF 319
Query: 313 EDMDA---------RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRP 363
+ +D R+VV+T +F S++ VID G+E R VYNPRIRA V++P
Sbjct: 320 KPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQP 379
Query: 364 ISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIA 423
IS+ QAE R+ G CLY + F + PL + E NL+S+VL +KR IA
Sbjct: 380 ISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIA 439
Query: 424 EPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCE 483
G C F+++PAPE+LMQALEDLDYLAALD+DG+LS+ G+I+SEFPL P+L+K++LASCE
Sbjct: 440 GLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCE 499
Query: 484 FDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALR--RALEHTDGDHSSLIQVYEAF----I 537
FDCVDE+LT+AAM+TA F+ P AEEAAL + H +GDH +LI +Y+A+ +
Sbjct: 500 FDCVDEVLTIAAMVTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTL 559
Query: 538 QSGAD---EAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKA 594
S ++ E WC+ LN +AL A +R ELLE+++RIELP + PAFGS++N +++KA
Sbjct: 560 NSSSEYCVEKWCRDYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKA 619
Query: 595 LVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTISKDN 654
L+SGYF+++ARD DG+GNYL+LTHK VAQL Y + + P WVL+H F+IS++N
Sbjct: 620 LLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSGYSITK---KMPEWVLFHKFSISENN 676
Query: 655 CLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLLNQLREGMADSTAGSKS----SSAQEF 710
+ I SEI P++ ++L P Y+ SNLPPSES+D+L Q+ + ++ + +K + E
Sbjct: 677 YIRITSEISPELFMQLVPQYYFSNLPPSESKDILQQVVDHLSPVSTMNKEQQMCETCPET 736
Query: 711 RDPCVLQ 717
C LQ
Sbjct: 737 EQRCTLQ 743
>gi|68509926 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Homo
sapiens]
Length = 795
Score = 435 bits (1118), Expect = e-122
Identities = 262/685 (38%), Positives = 404/685 (58%), Gaps = 32/685 (4%)
Query: 23 VNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQ 82
+NPF LP + RYY++LK+R LP+W + F + L + + V++ GE GSGK+TQIPQ
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLV--GETGSGKTTQIPQ 172
Query: 83 WCAEFALARGFQKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTL 142
WC E+ + K V TQP +AA S+A RVADEMD+ LG EVGYSI EDC+ T+
Sbjct: 173 WCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTI 232
Query: 143 LRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVV 202
L++ D +LL+E + +GV++LDEA ER++A+D L G+L++ ++ DL+V+V
Sbjct: 233 LKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR--SDLKVIV 290
Query: 203 VTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLEL--CRKE 259
++ K + ++ N P++ IP P I++ P D +EAA + V+++ C +E
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRT--HPVEIFYTPEPERDYLEAAIRTVIQIHMCEEE 348
Query: 260 LPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCG-RAVQAVYEDMD-- 316
GD+L+FL +EEI C+ + REV+ L + +++PL+ + Q ++E
Sbjct: 349 -EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPK 407
Query: 317 ------ARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAE 370
RKVVV+ +A+ S ++ + VID G + VYNPRIR E ++ ISK A+
Sbjct: 408 KQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ 467
Query: 371 ARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHF 430
R RA PG C LY + + E P + NL S+VL LK+ I + F
Sbjct: 468 QRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDF 527
Query: 431 LDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEM 490
+D PAPE LM+ALE L+YLAAL+DDGDL++LG +++EFPL P+LAK ++ASC+++C +E+
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEV 587
Query: 491 LTLAAMLTAAPGFTRP---PLSAEEAALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQ 547
L++ AML+ F RP +A+EA +R A H DGDH +L+ VY AF Q+ WC
Sbjct: 588 LSITAMLSVPQCFVRPTEAKKAADEAKMRFA--HIDGDHLTLLNVYHAFKQNHESVQWCY 645
Query: 548 ARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDT 607
+N+ +L A +R +L +M R LP F S +++KALV+GYF++VA
Sbjct: 646 DNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAH-L 704
Query: 608 DGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQML 667
+ TG+YL + V QL + P WVLY+ F ++ N + ++I+P+ L
Sbjct: 705 ERTGHYLTVKDNQVVQLHPSTVLDHK------PEWVLYNEFVLTTKNYIRTCTDIKPEWL 758
Query: 668 VELAPPYF-LSNLPPSESRDLLNQL 691
V++AP Y+ +SN P E++ L+++
Sbjct: 759 VKIAPQYYDMSNFPQCEAKRQLDRI 783
>gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens]
Length = 1220
Score = 307 bits (786), Expect = 3e-83
Identities = 216/661 (32%), Positives = 340/661 (51%), Gaps = 24/661 (3%)
Query: 38 LLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQ 97
+L+QR++LPI+ + ++ + N +++V GE GSGK+TQI Q+ AE +G+
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQ--ILIVIGETGSGKTTQITQYLAEAGYT---SRGK 612
Query: 98 VTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVAS 157
+ TQP +AA S+A RV++E LG EVGY+I EDCT P T++++ D +LL+E
Sbjct: 613 IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLI 672
Query: 158 TRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWG 217
+ +++LDEA ER++ +D L GLL+ ++ D++++V + K ++
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ--DMKLIVTSATLDAVKFSQYFY 730
Query: 218 NPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLELCRKELPGDVLVFLPSEEEISL 276
PI IP P I + P D ++A+ V+++ E PGD+LVFL +EEI
Sbjct: 731 EAPIFTIPGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDT 788
Query: 277 CCESLSREVESLLLQGLPPRVLPLHPDCGRAVQAVYEDM---DARKVVVTHWLADFSFSL 333
CE L ++SL +LP++ +Q D +RKVV+ +A+ S ++
Sbjct: 789 ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTI 848
Query: 334 PSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFL 393
I +V+D G + VYN + + V+ PIS+ QA+ R RA PG C LY +
Sbjct: 849 DGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAY 908
Query: 394 ELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALD 453
E P + NL+S VL LK I + F+D P E L+ A+E L L ALD
Sbjct: 909 RDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD 968
Query: 454 DDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEA 513
D+G L+ LG ++EFPL P L K L+ S C +EMLT+ +ML+ F RP A
Sbjct: 969 DEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALA 1028
Query: 514 ALRRALEH-TDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQR 572
++A H T+GDH +L+ VY ++ + WC + +L +A +R ++L +M R
Sbjct: 1029 DQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1088
Query: 573 IELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRS 632
+ L + + G R +QKA+ SG+F A+ G L+ + V S +
Sbjct: 1089 HK--LDVVSCGKSTVR--VQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFN- 1143
Query: 633 RRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLLNQLR 692
R P WV+YH ++ + V+ I P+ LVE AP +F + P S+ Q
Sbjct: 1144 -----RQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRL 1198
Query: 693 E 693
E
Sbjct: 1199 E 1199
>gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo sapiens]
Length = 1227
Score = 295 bits (755), Expect = 1e-79
Identities = 202/644 (31%), Positives = 334/644 (51%), Gaps = 25/644 (3%)
Query: 38 LLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQ 97
+L+QRQ LPI+A + L + N +V+V GE GSGK+TQ+ Q+ E G
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDN--SIVIVVGETGSGKTTQLTQYLHEDGYT---DYGM 579
Query: 98 VTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVAS 157
+ TQP +AA S+A RV++EM LG EVGY+I EDCT NTL+++ D +LL+E
Sbjct: 580 IGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLR 639
Query: 158 TRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWG 217
+ +++DEA ERS+ +D L GLL++ + DL+++V + K AF+G
Sbjct: 640 EADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARR--SDLKLIVTSATMDAEKFAAFFG 697
Query: 218 NPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLELCRKELPGDVLVFLPSEEEISL 276
N PI HIP P I + P D VEAA + L++ PGD+L+F+P +E+I +
Sbjct: 698 NVPIFHIPGRTF--PVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEV 755
Query: 277 CCESLSREVESLLLQGLPP-RVLPLHPDCGRAVQA-VYEDMD--ARKVVVTHWLADFSFS 332
+ + +E L + P VLP++ +QA +++ RK +V +A+ S +
Sbjct: 756 TSDQIVEHLEEL--ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLT 813
Query: 333 LPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSF 392
+ I VIDSG V+NPRI + + PIS+ A R RA PG C LY +S
Sbjct: 814 VDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSA 873
Query: 393 LELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAAL 452
+ E P + NL+++VLLLK + + + HF+D P + ++ ++ L L AL
Sbjct: 874 YKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAL 933
Query: 453 DDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEE 512
D+ G L+ G ++ EFPL P L+K L+ SC+ C E+L + +ML+ F RP EE
Sbjct: 934 DNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEE 993
Query: 513 A-ALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQ 571
+ +R + DH + + VY + + WC ++ A+ + ++R +L ++M
Sbjct: 994 SDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIM- 1052
Query: 572 RIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYR 631
++ +SL + G++ + ++K + + YF + A+ G G Y+ + L
Sbjct: 1053 -VQQRMSLASCGTDWD--IVRKCICAAYFHQAAK-LKGIGEYVNIRTGMPCHLHP---TS 1105
Query: 632 SRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYF 675
S P +++YH ++ + V+ + + L EL P ++
Sbjct: 1106 SLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1149
>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
Length = 1041
Score = 291 bits (746), Expect = 1e-78
Identities = 213/643 (33%), Positives = 337/643 (52%), Gaps = 31/643 (4%)
Query: 42 RQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVT 101
R++LP++ R L + ++ V+++ GE GSGK+TQIPQ+ E K + T
Sbjct: 396 RRSLPVFPFREELLAAIANHQ--VLIIEGETGSGKTTQIPQYLFEEGYTNKGMK--IACT 451
Query: 102 QPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGT 161
QP +AA S+A RVA EM + LG+EVGYSI EDCT T+LR+ D +LL+E S
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 511
Query: 162 GAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPI 221
++ V+++DEA ER++ +D L GL++D + + +L+V+V + + F+ + P+
Sbjct: 512 ASYSVVMVDEAHERTLHTDILFGLIKD--VARFRPELKVLVASATMDTARFSTFFDDAPV 569
Query: 222 VHIPREPGER-PSPIYWDTIPP-DRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCE 279
IP G R P I++ P D +EA +VL++ + PGD+LVFL +EEI CE
Sbjct: 570 FRIP---GRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 626
Query: 280 SLSREVESLLLQGLPPRVLPLHPDCGRAVQA-VYEDMD--ARKVVVTHWLADFSFSLPSI 336
L L + VLP++ + +QA +++ ARKVVV +A+ S ++ I
Sbjct: 627 MLQDPCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSPTIEGI 686
Query: 337 QHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELE 396
+V+D G + YNPR E + P SK A R RA G C LY + E
Sbjct: 687 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 746
Query: 397 APPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDG 456
P + +L ++VLLLK I + FLD P E L+ LE L L AL+ G
Sbjct: 747 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLTLEQLYALGALNHLG 806
Query: 457 DLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG-FTRPP---LSAEE 512
+L+ G ++E P+ P L+K +LAS ++ C +E+LT+AAML+ F RP + A+
Sbjct: 807 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 866
Query: 513 AALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQR 572
A + L GDH L+ VY + +SG WC + + ++ +A +R +L L++R
Sbjct: 867 ARVNFFL--PGGDHLVLLNVYTQWAESGYSSQWCCENFVQFRSMRRARDVREQLEGLLER 924
Query: 573 IELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRS 632
+E+ LS + + ++KA+ +GYF AR T ++ V Q + + +
Sbjct: 925 VEVGLS----SCQGDYIRVRKAITAGYFYHTARLTRS-------GYRTVKQQQTVFIHPN 973
Query: 633 RRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYF 675
+ P W+LYH ++ + V EI+ L+E+AP Y+
Sbjct: 974 SSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1016
>gi|20544129 DEAH (Asp-Glu-Ala-His) box polypeptide 35 [Homo
sapiens]
Length = 703
Score = 285 bits (729), Expect = 1e-76
Identities = 216/654 (33%), Positives = 334/654 (51%), Gaps = 35/654 (5%)
Query: 40 KQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVT 99
+QRQ LP++ R L +E+ T V++ GE G GKSTQIPQ+ AE A +G+V
Sbjct: 49 QQRQKLPVFKLRNHILYLIENYQT--VVIVGETGCGKSTQIPQYLAE---AGWTAEGRVV 103
Query: 100 -VTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGP-NTLLRFCWDRLLLQEVAS 157
VTQP +AA ++A RVA+E LGHEVGY I +DCT T ++F D +L++E+
Sbjct: 104 GVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMV 163
Query: 158 TRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWG 217
+ V++LDEA ER++ +D GLL+ +++K GDLR++V + K R F+
Sbjct: 164 DPLLTKYSVIMLDEAHERTLYTDIAIGLLK--KIQKKRGDLRLIVASATLDADKFRDFFN 221
Query: 218 N--------PPIVHIPREPGERPSPIYWDTIP-PDRVEAACQAVLELCRKELPGDVLVFL 268
V + E P I++ P PD +++ + V+++ + E GDVL FL
Sbjct: 222 QNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFL 281
Query: 269 PSEEEISLCCESLSREVESLLLQGLPP--RVLPLHPDCGRAVQA-VYEDMD--ARKVVVT 323
+EE+ L + +L G+ RVLP++ Q V+E + RKV+V
Sbjct: 282 TGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVA 341
Query: 324 HWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGS 383
+A+ S ++ I +VID G YNPR E V+ P+S+ A R R G
Sbjct: 342 TNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGK 401
Query: 384 CLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQAL 443
C LY + + + P P + NL+ ++L LK I HF+ P ++++QAL
Sbjct: 402 CYRLYTEEAFD-KLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQAL 460
Query: 444 EDLDYLAALDDDGDLSD-LGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG 502
E L L LD D L++ LG+ ++EFPL P AK LL S F C E+L++AAM+
Sbjct: 461 ELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNI 520
Query: 503 FTRPPLSAEEAA-LRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHK 561
F PP A + R +GDH +++ +YEAFI+ D WCQ LN+ L +A
Sbjct: 521 FVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAAT 580
Query: 562 LRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHV 621
+R +L +L+ + ++P SE + + + +VSG+F AR TG Y + H
Sbjct: 581 VREQLKKLLVKFQVPRK----SSEGDPDLVLRCIVSGFFANAAR-FHSTGAYRTIRDDHE 635
Query: 622 AQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYF 675
+ S +PP WV+Y+ + + V+ I+ L+ELAP ++
Sbjct: 636 LHIHP----ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>gi|31542729 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Homo
sapiens]
Length = 779
Score = 260 bits (664), Expect = 4e-69
Identities = 202/674 (29%), Positives = 324/674 (48%), Gaps = 77/674 (11%)
Query: 46 PIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVTQPYP 105
PI R ++ + N ++V+G GSGK+TQ+P++ E + Q G + VTQP
Sbjct: 54 PIQKQRKKIIQAVRDN--SFLIVTGNTGSGKTTQLPKYLYEAGFS---QHGMIGVTQPRK 108
Query: 106 LAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWG 165
+AA S+A RVA+EM TLG +VGY + +DC+ T +++ D LL+ + +
Sbjct: 109 VAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFS 168
Query: 166 VLVLDEAQERSVASDSLQGLLQDARLEKLPG---DLRVVVVTDPALEPKLRAFWGNPPIV 222
V++LDEA ER++ +D L GLL+ EK P L+VVV++ KL AF+GN PI
Sbjct: 169 VIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIF 228
Query: 223 HIP------RE-------PGERPSPIYWDTIPPDRVEAACQAVLELCRKELPGDVLVFLP 269
IP RE P +R + Y ++A + +++ E+ GD+LVFL
Sbjct: 229 DIPGRLYPVREKFCNLIGPRDRENTAY--------IQAIVEVTMDIHLNEMAGDILVFLT 280
Query: 270 SEEEISLCCESLSREVESL---------LLQGLPPRVLPLHPDCGRAVQA---VYEDMDA 317
+ EI CE L + ES+ L GL +LP + Q +
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGL--LILPCYGSMTTDQQRRIFLPPPPGI 338
Query: 318 RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRAR 377
RK V++ ++ S ++ I++V+D G + +NPR+ + + PISK +A R RA
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 378 GFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPE 437
G C +Y K F P P + +L+S+VL LK I + +LD P
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 438 ALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAML 497
+++AL+ L A+D G ++ LG+ + EFPL P L A++ + DC D +L +AAML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 498 TAAPGFTRP--PLSAEEAALR-RALEHTDG---DHSSLIQVYEAFIQSGADEAWCQARGL 551
+ F RP P +EA R R L G D ++L ++E SGA +WCQ +
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWI 578
Query: 552 NWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRD-LQKALVSGYFLKVARDTDGT 610
+W L A ++ +L EL+++++ P E + + L++ L +GYF VAR + G
Sbjct: 579 HWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVG- 637
Query: 611 GNYLLLTHKHVAQLSSYCCYRSRRAPARPPP------------WVLYHNFTISKDNCLSI 658
++C R +P P W+++H ++ I
Sbjct: 638 --------------RTFCTVDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARI 683
Query: 659 VSEIQPQMLVELAP 672
V I+ + + +L P
Sbjct: 684 VCPIRYEWVRDLLP 697
>gi|20336302 DEAH (Asp-Glu-Ala-His) box polypeptide 33 [Homo
sapiens]
Length = 707
Score = 259 bits (663), Expect = 5e-69
Identities = 207/669 (30%), Positives = 346/669 (51%), Gaps = 43/669 (6%)
Query: 30 PFSSRYYELLK-QRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFA 88
P +S Y E ++ QR++LPI+ AR L QL + V++ GE GSGK+TQIPQ+ E
Sbjct: 58 PSASPYPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLI--GETGSGKTTQIPQYLYEGG 115
Query: 89 LARGFQKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWD 148
++R +G + VTQP +AA SLA RV+DE LG VGY++ +D T +T ++F D
Sbjct: 116 ISR---QGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTD 172
Query: 149 RLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDAR-----LEKLPGDLRVVVV 203
+LL+E S + ++LDEA ER++ +D L G+++ A+ L KLP L+V+V+
Sbjct: 173 GMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLP--LKVIVM 230
Query: 204 TDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLELCRKELPG 262
+ ++ P++++ E + P +++ P D + AA +V ++ +E P
Sbjct: 231 SATMDVDLFSQYFNGAPVLYL--EGRQHPIQVFYTKQPQNDYLHAALVSVFQI-HQEAPS 287
Query: 263 --DVLVFLPSEEEISLCCESLSREVESLLLQGLPPR-VLPLHPDCGRAVQ-AVYEDMDA- 317
D+LVFL +EEI ++ R++ L G P VLPL+ A Q V++
Sbjct: 288 SQDILVFLTGQEEIEAMSKT-CRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKG 346
Query: 318 -RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRA 376
RKV+++ +A+ S ++ I++V+D+G+ YNP E ++ +SK QA R RA
Sbjct: 347 YRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRA 406
Query: 377 RGFPPGSCLCLYPK-SFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPA 435
G C LY + F + + +P+ + C NL+S++L L ++ F+ +P+
Sbjct: 407 GREDSGICYRLYTEDEFEKFDKMTVPEIQRC--NLASVMLQLLAMKVPNVLTFDFMSKPS 464
Query: 436 PEALMQALEDLDYLAAL---DDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLT 492
P+ + A+ LD L AL DD L+ +G ++ FPL P+ AK +L S +F C +E+LT
Sbjct: 465 PDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILT 524
Query: 493 LAAMLTAAPGFTRPPLSAEEA-ALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGL 551
+ ++L+ PP EE +R+ ++GDH +L+ +Y F G ++ WC+ +
Sbjct: 525 IVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFV 584
Query: 552 NWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTG 611
N + ++R +L ++ L +S+P S + +++ L F+ A + G
Sbjct: 585 NSKNMTLVAEVRAQLRDIC----LKMSMPIASSRGDVESVRRCLAHSLFMSTA-ELQPDG 639
Query: 612 NYLLL-THKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVEL 670
Y TH+ VA S + + A +LY N +D C+ I Q L E
Sbjct: 640 TYATTDTHQPVAIHPSSVLFHCKPACVVYTE-LLYTNKCYMRDLCV-----IDAQWLYEA 693
Query: 671 APPYFLSNL 679
AP YF L
Sbjct: 694 APEYFRRKL 702
>gi|38158022 DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Homo
sapiens]
Length = 1143
Score = 206 bits (523), Expect = 8e-53
Identities = 173/557 (31%), Positives = 269/557 (48%), Gaps = 34/557 (6%)
Query: 34 RYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGF 93
R +L ++R ALPI L+ L+ + VV+V+G+ G GKSTQ+PQ + LA GF
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQ--VVVVAGDTGCGKSTQVPQ----YLLAAGF 204
Query: 94 QKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQ 153
V TQP +A SLA RV E G +VGY I E T + F LLL+
Sbjct: 205 S--HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLR 262
Query: 154 EVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLR 213
++ + VL++DE ER + +D L G+LQ RL DL+V++++
Sbjct: 263 QIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQ--RLLPTRPDLKVILMSATINISLFS 320
Query: 214 AFWGNPPIVHIPR---------EPGE-RPSPIYWDTIPPDRVEAACQAVLELCRKELPGD 263
+++ N P+V +P +P E P+ + + P +++ E GD
Sbjct: 321 SYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGD 380
Query: 264 VLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQAVYEDM---DARKV 320
+LVFL EIS E+ ++ VLPLH A Q D+ RK
Sbjct: 381 LLVFLSGMAEISAVLEA----AQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKC 436
Query: 321 VVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFP 380
+++ +A+ S ++ I+ V+DSG Y+P+ + + IS+ AE R+ RA
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 496
Query: 381 PGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALM 440
PG C LY +S + AP P P + L SLVL +K + +P F++ P P +L
Sbjct: 497 PGVCFRLYAESDYDAFAP-YPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLE 555
Query: 441 QALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAA 500
A+ L ALD L+ +G +L++ P+ + K L+ F V+ +LT+AA L+
Sbjct: 556 TAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQ 615
Query: 501 PGFTRPPLSAEE-AALRRALEHTDGDHSSLIQVYEAFIQSGADEA-----WCQARGLNWA 554
FTR S+ E AA RR LE GD +L V+ A++Q ++ + WC+ RG+
Sbjct: 616 SPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEH 675
Query: 555 ALCQAHKLRGELLELMQ 571
L + LR + EL++
Sbjct: 676 RLYEMANLRRQFKELLE 692
>gi|169211440 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box
polypeptide 40 [Homo sapiens]
Length = 452
Score = 169 bits (427), Expect = 1e-41
Identities = 128/401 (31%), Positives = 200/401 (49%), Gaps = 43/401 (10%)
Query: 46 PIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVTQPYP 105
PI R ++ + N ++V+G GSGK+TQ+P++ E + Q G + VTQP
Sbjct: 54 PIQKQRKKIIQAVRDN--SFLIVTGNTGSGKTTQLPKYLYEAGFS---QHGMIGVTQPRK 108
Query: 106 LAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWG 165
+AA S+A RVA+EM TLG +VGY + +DC+ T +++ D LL+ + +
Sbjct: 109 VAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFS 168
Query: 166 VLVLDEAQERSVASDSLQGLLQDARLEKLPG---DLRVVVVTDPALEPKLRAFWGNPPIV 222
V++LDEA ER++ +D L GLL+ EK P L+VVV++ KL AF+GN PI
Sbjct: 169 VIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIF 228
Query: 223 HIP------RE-------PGERPSPIYWDTIPPDRVEAACQAVLELCRKELPGDVLVFLP 269
IP RE P +R + Y ++A + +++ E+ GD+LVFL
Sbjct: 229 DIPGRLYPVREKFCNLIGPRDRENTAY--------IQAIVKVTMDIHLNEMAGDILVFLT 280
Query: 270 SEEEISLCCESLSREVESL---------LLQGLPPRVLPLHPDCGRAVQA---VYEDMDA 317
+ EI CE L + ES+ +L GL +LP + Q +
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTILDGL--LILPCYGSMTTDQQRRIFLPPPPGI 338
Query: 318 RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRAR 377
RK V++ ++ S ++ I++V+D G + +NPR+ + + PISK +A R RA
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 378 GFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLK 418
G C +Y K F P P + +L+S+VL LK
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
>gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
[Homo sapiens]
Length = 1008
Score = 141 bits (356), Expect = 2e-33
Identities = 160/663 (24%), Positives = 280/663 (42%), Gaps = 104/663 (15%)
Query: 34 RYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGF 93
RY E+ R+ LP + + + ++++ V ++SGE G GK+TQ+ Q+ + + RG
Sbjct: 196 RYIEMQHFREKLPSYGMQKELVNLIDNHQ--VTVISGETGCGKTTQVTQFILDNYIERG- 252
Query: 94 QKG---QVTVTQPYPLAARSLALRVADEMDLTLG--HEVGYSIP-QEDCTGPNTLLRFCW 147
KG ++ TQP ++A S+A RVA E + G + GY I Q + +C
Sbjct: 253 -KGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCT 311
Query: 148 DRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPA 207
++LQ + S + +VLDE ER++ SD L +++D L DL+V++++
Sbjct: 312 TGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKD--LLNFRSDLKVILMSATL 369
Query: 208 LEPKLRAFWGNPPIVH-----------------------------------------IPR 226
K ++GN P++H + R
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNR 429
Query: 227 EPGERPSPIYWDTIPP------DRVEAACQAVLELCR------------------KELPG 262
+ E IY + P R A+ V+E+ +E G
Sbjct: 430 QEKEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDG 489
Query: 263 DVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLH---PDCGRAVQAVYEDMDARK 319
+LVFLP + IS + L +V + + ++PLH P + RK
Sbjct: 490 AILVFLPGWDNISTLHDLLMSQV---MFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRK 546
Query: 320 VVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGF 379
+V+ +A+ S ++ + +VID G + ++ + +SK A+ R+ RA
Sbjct: 547 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 606
Query: 380 PPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFL----DQPA 435
PG C LY L P + L L L +K ++ G +FL D P+
Sbjct: 607 QPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLG--GIAYFLSRLMDPPS 663
Query: 436 PEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAA 495
EA++ ++ L L ALD +L+ LGV L+ P+ P + K +L F C+D +LT+AA
Sbjct: 664 NEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAA 723
Query: 496 MLTAAPGFTRPPLSAEEAALRRALE---HTDGDHSSLIQVYEAFIQSGA-----DEAWCQ 547
L+ F PL E+ A R E T DH +++ +E + ++ ++ +C
Sbjct: 724 SLSFKDPFV-IPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCW 782
Query: 548 ARGLNWAALCQAHKLRGELLELMQRIEL-----PLSLPAFGSEQNRRDLQKALVSGYFLK 602
L+ L H ++G+ E + P + + N + ++ + +G + K
Sbjct: 783 EYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPK 842
Query: 603 VAR 605
VA+
Sbjct: 843 VAK 845
>gi|20336290 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2
[Homo sapiens]
Length = 1155
Score = 141 bits (355), Expect = 2e-33
Identities = 141/517 (27%), Positives = 234/517 (45%), Gaps = 39/517 (7%)
Query: 45 LPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGF-QKGQVTVTQP 103
LP+ R T L +E +P VV++SG+ G GK+T+IPQ E + G + V +TQP
Sbjct: 395 LPVDPHRDTILNAIEQHP--VVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQP 452
Query: 104 YPLAARSLALRVADEMDLTLGHEVGYSIPQEDCT-GPNTLLRFCWDRLLLQEVASTRGTG 162
++A S+A RV+ E+ +L VG+ + E L FC +LL+++ S
Sbjct: 453 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLE 512
Query: 163 AWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIV 222
+++DE ER V +D L LL+ L++L LR+V+++ + ++G P++
Sbjct: 513 GVSHVIVDEVHERDVNTDFLLILLKG--LQRLNPALRLVLMSATGDNERFSRYFGGCPVI 570
Query: 223 HIPREPGERPSPIYWDTIPP------------DRVEAAC--------QAVLELCRKELPG 262
+P D + E C VL + + PG
Sbjct: 571 KVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPG 630
Query: 263 DVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQ-AVYED--MDARK 319
+L FLP +EI + L E+L + +LP+H + Q A+++ + RK
Sbjct: 631 GILCFLPGWQEIKGVQQRLQ---EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRK 687
Query: 320 VVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGF 379
+V+ +A+ S ++ I HV+DSGL Y+ + + +S+ RR RA
Sbjct: 688 IVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 747
Query: 380 PPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFL----DQPA 435
G L+P+S LE + P P + L +LVL K + E FL D P
Sbjct: 748 QSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAKIH-MPEKTAVEFLSKAVDSPN 805
Query: 436 PEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAA 495
+A+ +A+ L + LD L+ LG L+ P LAKA++ + F C+ +L + +
Sbjct: 806 IKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVS 865
Query: 496 MLTAAPGFTRPPLSAEEAALRRALEHTDG-DHSSLIQ 531
LT P + AE ++ L H G DH + ++
Sbjct: 866 CLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVR 902
>gi|20336294 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1
[Homo sapiens]
Length = 1194
Score = 141 bits (355), Expect = 2e-33
Identities = 141/517 (27%), Positives = 234/517 (45%), Gaps = 39/517 (7%)
Query: 45 LPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGF-QKGQVTVTQP 103
LP+ R T L +E +P VV++SG+ G GK+T+IPQ E + G + V +TQP
Sbjct: 434 LPVDPHRDTILNAIEQHP--VVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQP 491
Query: 104 YPLAARSLALRVADEMDLTLGHEVGYSIPQEDCT-GPNTLLRFCWDRLLLQEVASTRGTG 162
++A S+A RV+ E+ +L VG+ + E L FC +LL+++ S
Sbjct: 492 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLE 551
Query: 163 AWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIV 222
+++DE ER V +D L LL+ L++L LR+V+++ + ++G P++
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKG--LQRLNPALRLVLMSATGDNERFSRYFGGCPVI 609
Query: 223 HIPREPGERPSPIYWDTIPP------------DRVEAAC--------QAVLELCRKELPG 262
+P D + E C VL + + PG
Sbjct: 610 KVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPG 669
Query: 263 DVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQ-AVYED--MDARK 319
+L FLP +EI + L E+L + +LP+H + Q A+++ + RK
Sbjct: 670 GILCFLPGWQEIKGVQQRLQ---EALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRK 726
Query: 320 VVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGF 379
+V+ +A+ S ++ I HV+DSGL Y+ + + +S+ RR RA
Sbjct: 727 IVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 786
Query: 380 PPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFL----DQPA 435
G L+P+S LE + P P + L +LVL K + E FL D P
Sbjct: 787 QSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAKIH-MPEKTAVEFLSKAVDSPN 844
Query: 436 PEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAA 495
+A+ +A+ L + LD L+ LG L+ P LAKA++ + F C+ +L + +
Sbjct: 845 IKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVS 904
Query: 496 MLTAAPGFTRPPLSAEEAALRRALEHTDG-DHSSLIQ 531
LT P + AE ++ L H G DH + ++
Sbjct: 905 CLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVR 941
>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
[Homo sapiens]
Length = 994
Score = 137 bits (345), Expect = 3e-32
Identities = 159/666 (23%), Positives = 278/666 (41%), Gaps = 124/666 (18%)
Query: 34 RYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGF 93
RY E+ R+ LP + + + ++++ V ++SGE G GK+TQ+ Q+ + + RG
Sbjct: 196 RYIEMQHFREKLPSYGMQKELVNLIDNHQ--VTVISGETGCGKTTQVTQFILDNYIERG- 252
Query: 94 QKG---QVTVTQPYPLAARSLALRVADEMDLTLG--HEVGYSIP-QEDCTGPNTLLRFCW 147
KG ++ TQP ++A S+A RVA E + G + GY I Q + +C
Sbjct: 253 -KGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCT 311
Query: 148 DRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPA 207
++LQ + S + +VLDE ER++ SD L +++D L DL+V++++
Sbjct: 312 TGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKD--LLNFRSDLKVILMSATL 369
Query: 208 LEPKLRAFWGNPPIVH-----------------------------------------IPR 226
K ++GN P++H + R
Sbjct: 370 NAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNR 429
Query: 227 EPGERPSPIYWDTIPP------DRVEAACQAVLELCR------------------KELPG 262
+ E IY + P R A+ V+E+ +E G
Sbjct: 430 QEKEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDG 489
Query: 263 DVLVFLPSEEEISLCCESLSREV------ESLLLQGLPPRVLPLHPDCGRAVQAVYEDMD 316
+LVFLP + IS + L +V ++ + + PP V
Sbjct: 490 AILVFLPGWDNISTLHDLLMSQVMFKSVNQTQVFKRTPPGV------------------- 530
Query: 317 ARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRA 376
RK+V+ +A+ S ++ + +VID G + ++ + +SK A+ R+ RA
Sbjct: 531 -RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRA 589
Query: 377 RGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFL----D 432
PG C LY L P + L L L +K ++ G +FL D
Sbjct: 590 GRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLG--GIAYFLSRLMD 646
Query: 433 QPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLT 492
P+ EA++ ++ L L ALD +L+ LGV L+ P+ P + K +L F C+D +LT
Sbjct: 647 PPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLT 706
Query: 493 LAAMLTAAPGFTRPPLSAEEAALRRALE---HTDGDHSSLIQVYEAFIQSGA-----DEA 544
+AA L+ F PL E+ A R E T DH +++ +E + ++ ++
Sbjct: 707 IAASLSFKDPFV-IPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKD 765
Query: 545 WCQARGLNWAALCQAHKLRGELLELMQRIEL-----PLSLPAFGSEQNRRDLQKALVSGY 599
+C L+ L H ++G+ E + P + + N + ++ + +G
Sbjct: 766 YCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGL 825
Query: 600 FLKVAR 605
+ KVA+
Sbjct: 826 YPKVAK 831
>gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo
sapiens]
Length = 1270
Score = 116 bits (291), Expect = 6e-26
Identities = 149/600 (24%), Positives = 257/600 (42%), Gaps = 83/600 (13%)
Query: 38 LLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAE-FALARGFQKG 96
+L++R+ LP+ LE + N VV++ G G GK+TQ+PQ+ + F +
Sbjct: 381 ILQERELLPVKKFESEILEAISQN--SVVIIRGATGCGKTTQVPQFILDDFIQNDRAAEC 438
Query: 97 QVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQED-CTGPNTLLRFCWDRLLLQEV 155
+ VTQP ++A S+A RVA E G GYS+ E P+ + FC +LL+++
Sbjct: 439 NIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL 498
Query: 156 -ASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRA 214
A RG +++DE ER + +D L +L+D ++ P ++R+V+++
Sbjct: 499 EAGIRGISH---VIVDEIHERDINTDFLLVVLRDV-VQAYP-EVRIVLMSATIDTSMFCE 553
Query: 215 FWGNPPIVHIPREPGERPSPIYWDTI------PPDR--------------VEAACQAVL- 253
++ N PI+ + D I PP + +A C +
Sbjct: 554 YFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICG 613
Query: 254 ------------ELCRKELP-----------------GDVLVFLPSEEEISLCCESLSRE 284
+L KE P G VLVFLP I + L
Sbjct: 614 DEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMN 673
Query: 285 VESLLLQGLPPRVLPLHPDCGRAVQAVYED---MDARKVVVTHWLADFSFSLPSIQHVID 341
++LPLH R Q D + KV+++ +A+ S ++ + +VID
Sbjct: 674 PH---FGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVID 730
Query: 342 SGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKS-FLELEAPPL 400
S + ++ SK E R+ RA PG C L ++ F LE
Sbjct: 731 SCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMT 790
Query: 401 PQPRVCEENLSSLVLLLKRRQIAEPGE--CHFLDQPAPEALMQALEDLDYLAALDDDGDL 458
P+ + L + L +K ++ G+ ++ P +A+++A L L ALD + +L
Sbjct: 791 PE--MFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDEL 848
Query: 459 SDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEA---AL 515
+ LG IL++ P+ P K ++ C F D + T+A AA F P ++ +
Sbjct: 849 TPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIA----AATCFPEPFINEGKRLGYIH 904
Query: 516 RRALEHTDGDHSSLIQVYEAF--IQSGADEA---WCQARGLNWAALCQAHKLRGELLELM 570
R + DH +L+ V++A+ + G +EA +C+ + LN A L + + +L E++
Sbjct: 905 RNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL 964
>gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo
sapiens]
Length = 1157
Score = 92.8 bits (229), Expect = 1e-18
Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 19/261 (7%)
Query: 33 SRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARG 92
+R E+ ++R LPI + +E + +P +V+V GE GSGK+TQ+PQ+ E +
Sbjct: 240 NRSPEMQEERLKLPILSEEQVIMEAVAEHP--IVIVCGETGSGKTTQVPQFLYEAGFSS- 296
Query: 93 FQKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLL 152
+ + VT+P +AA +++ RVA EM+L+ V Y I E T ++F D +LL
Sbjct: 297 -EDSIIGVTEPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLL 354
Query: 153 QEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQD----ARLEKLPGDLRVVVVT---- 204
+E+ + V+++DEA ERSV +D L GLL LP L ++ T
Sbjct: 355 KEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVE 414
Query: 205 DPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIPP--DRVEAACQAVLELCRKELPG 262
D P+L F PP++ + E + P ++++ P D + V ++ R G
Sbjct: 415 DFTQNPRL--FAKPPPVIKV--ESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAG 470
Query: 263 DVLVFLPSEEEISLCCESLSR 283
+LVFL + E+ C L +
Sbjct: 471 GILVFLTGQAEVHALCRRLRK 491
Score = 77.8 bits (190), Expect = 3e-14
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 293 LPPRVLPLHPDCGRAVQA-VYEDMD--ARKVVVTHWLADFSFSLPSIQHVIDSGLELRSV 349
LP VLPL+ QA V++ R VV +A+ S ++P I++V+D G +++
Sbjct: 586 LPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCG-KVKKR 644
Query: 350 YNPRIR--AEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCE 407
Y R+ + F+V +S+ A+ R RA PG C LY + + P P +
Sbjct: 645 YYDRVTGVSSFRVTW-VSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEQFPPPEITR 702
Query: 408 ENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGD---------- 457
+ L+L +K + + F P+ EAL+ A E L L AL
Sbjct: 703 RPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQEN 762
Query: 458 -----LSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGF---TRPPLS 509
++ LG ++ FP+AP AK L S + C+ +T+ A +T F RP S
Sbjct: 763 RLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAAS 822
Query: 510 AEEAALRRA-------LEHTDGDHSSLIQVYEAFIQSGADEA---------WCQARGLNW 553
EE ++ ++ T + +++ + + GA A +C+A GL +
Sbjct: 823 DEELTRLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRY 882
Query: 554 AALCQAHKLRGEL 566
A+ + +LRG+L
Sbjct: 883 KAMMEIRRLRGQL 895
>gi|67782362 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Homo
sapiens]
Length = 1369
Score = 90.5 bits (223), Expect = 5e-18
Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 11/208 (5%)
Query: 24 NPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQW 83
N F L + +Y +LLK+RQ LP++ R + +E L+ + VV+V+GE GSGKSTQ+P +
Sbjct: 551 NLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHR--VVVVAGETGSGKSTQVPHF 608
Query: 84 CAEFALARGFQ--KGQVTVTQPYPLAARSLALRVADEMDLTLG-----HEVGYSIPQEDC 136
E L ++ K + TQP ++A SLA RV DE+ G GY I E
Sbjct: 609 LLEDLLLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESR 668
Query: 137 TGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPG 196
+T L +C +LL+++ +++DE ERSV SD L +L++ ++
Sbjct: 669 ACESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKR--S 726
Query: 197 DLRVVVVTDPALEPKLRAFWGNPPIVHI 224
DL +++++ K ++ + PI+ I
Sbjct: 727 DLHLILMSATVDSEKFSTYFTHCPILRI 754
Score = 85.5 bits (210), Expect = 2e-16
Identities = 92/374 (24%), Positives = 159/374 (42%), Gaps = 33/374 (8%)
Query: 258 KELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQAVYEDMD- 316
+ + G VL+FLP I + LS + +V+ LH QA +
Sbjct: 864 RNIEGAVLIFLPGLAHIQQLYDLLSNDRR---FYSERYKVIALHSILSTQDQAAAFTLPP 920
Query: 317 --ARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRL 374
RK+V+ +A+ ++P + VID+G + Y+ + V +SK A R+
Sbjct: 921 PGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 980
Query: 375 RARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGE--CHFLD 432
RA G C +Y + E P + L L L + + + P + LD
Sbjct: 981 RAGRVRDGFCFRMYTRERFE-GFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALD 1039
Query: 433 QPAPEALMQALEDLDYLAALD-DDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEML 491
P + + A+ L + A + ++ L+ LG L+ P+ ++ K L+ F C+D +
Sbjct: 1040 PPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVA 1099
Query: 492 TLAAMLTAAPGFTRPPLSAEEAAL-RRALEHTDGDHSSLIQVYEAFI------QSG---A 541
TLAA++T FT P +EA L + AL D DH + +Y A++ Q G +
Sbjct: 1100 TLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDH---LTIYNAYLGWKKARQEGGYRS 1156
Query: 542 DEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRD----------L 591
+ +C+ LN +L ++ EL++L++ S + E NR L
Sbjct: 1157 EITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRASQTLSFQEIALL 1216
Query: 592 QKALVSGYFLKVAR 605
+ LV+G + V +
Sbjct: 1217 KAVLVAGLYDNVGK 1230
>gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo
sapiens]
Length = 1386
Score = 87.8 bits (216), Expect = 3e-17
Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 5/195 (2%)
Query: 32 SSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALAR 91
S ++ +L++RQ+LP W R T L L + VV++SG G GK+TQIPQ+ + +L
Sbjct: 531 SRQFQSILQERQSLPAWEERETILNLLRKHQ--VVVISGMTGCGKTTQIPQFILDDSLNG 588
Query: 92 GFQK-GQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRL 150
+K + TQP ++A S+A RVA E +G VGY I E T L +C +
Sbjct: 589 PPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGV 648
Query: 151 LLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEP 210
LL+ + +++DE ER+ SD L +L+D + + PG L+V++++
Sbjct: 649 LLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDI-VSQRPG-LQVILMSATLNAE 706
Query: 211 KLRAFWGNPPIVHIP 225
++ + P++ IP
Sbjct: 707 LFSDYFNSCPVITIP 721
Score = 77.8 bits (190), Expect = 3e-14
Identities = 89/348 (25%), Positives = 144/348 (41%), Gaps = 24/348 (6%)
Query: 245 VEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVL--PLHP 302
+EA + +++ PG +LVFLP EI + E L + SL R + PLH
Sbjct: 831 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQL--QSNSLFNNRRSNRCVIHPLHS 888
Query: 303 DCG-RAVQAVYEDMDA--RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQ 359
QAV+ A K++++ +A+ S ++ + +VIDSG Y+ E
Sbjct: 889 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 948
Query: 360 VLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKR 419
+S+ A R+ RA G C L+ + P + L L L +K
Sbjct: 949 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIK- 1007
Query: 420 RQIAEPGECH--------FLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLA 471
I E H ++ P ++L + L L AL D L+ LG L+ P+
Sbjct: 1008 --ILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVD 1065
Query: 472 PELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRR-ALEHTDGDHSSLI 530
+ K +L F C+D LT+AA L F P EEA ++ + D+ +L+
Sbjct: 1066 VRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALL 1125
Query: 531 QVYEAFIQS-----GADEAWCQARGLNWAALCQAHKLRGELLELMQRI 573
Q Y+ + S A +C+ L+ L + L+ + EL+ I
Sbjct: 1126 QAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1173
>gi|38505213 YTH domain containing 2 [Homo sapiens]
Length = 1430
Score = 85.9 bits (211), Expect = 1e-16
Identities = 65/191 (34%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Query: 42 RQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVT 101
RQ+LP++ + ++ ++ N VVL+ GE GSGK+TQIPQ+ + G ++ T
Sbjct: 190 RQSLPVFEKQEEIVKIIKENK--VVLIVGETGSGKTTQIPQFLLDDCFKNGIPC-RIFCT 246
Query: 102 QPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGT 161
QP LAA ++A RVA E +G +GY I E P TLL FC + +LL+ + + T
Sbjct: 247 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 306
Query: 162 -GAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKL-RAFWGNP 219
+++DE ER SD L L+D L+K P ++++ AL+ L ++G+
Sbjct: 307 LSTVTHVIVDEVHERDRFSDFLLTKLRDL-LQKHP--TLKLILSSAALDVNLFIRYFGSC 363
Query: 220 PIVHIPREPGE 230
P+++I P E
Sbjct: 364 PVIYIQGRPFE 374
Score = 84.0 bits (206), Expect = 5e-16
Identities = 117/504 (23%), Positives = 209/504 (41%), Gaps = 71/504 (14%)
Query: 255 LCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQA-VYE 313
+C G VL+FLP +EI + + + + +V LH + + Q V +
Sbjct: 616 ICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLK 675
Query: 314 DMDA--RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEA 371
+ A RK++++ +A+ S ++ + VIDSG ++ + ISK A
Sbjct: 676 NPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQ 735
Query: 372 RRLRARGFPPGSCLCLYPK----SFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGE 427
R+ RA PG C L+ + + LE + P L + + E L ++ P
Sbjct: 736 RKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQE--------LCLHTKLLAPVN 787
Query: 428 CHFLD------QPAPEALMQ-ALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLA 480
C D +P P +++ A++ L + A+D DL++LG L++ P+ P L K +L
Sbjct: 788 CPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLC 847
Query: 481 SCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAAL----RRALEHTDGDHSSLIQVYEAF 536
+ C+D +LT+A L F P ++++ A +R DH +L++ +
Sbjct: 848 AVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAF--- 904
Query: 537 IQSGADEAWCQARGLNW-AALCQAHKLRGELLELM--QRIELPLSLPAFG---------- 583
+AW +AR W A C+ + L +E++ R +L L A G
Sbjct: 905 ------QAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDI 958
Query: 584 -----SEQNRRDLQKALVSGYFLKVAR-DTDG---TGNYLLLTHKHVAQLSSYCCYR--- 631
+ +N ++ ALV+G + + D + TG H A + S Y+
Sbjct: 959 RDVNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIP 1018
Query: 632 -----SRRAPARPPPWVLYHNFT----ISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPS 682
+ A P W++Y T I+ C S V+ + +LV P SN
Sbjct: 1019 PANGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPV--TILVFCGPARLASNALQE 1076
Query: 683 ESRDLLNQLREGMADSTAGSKSSS 706
S ++ + +DS K+++
Sbjct: 1077 PSSFRVDGIPNDSSDSEMEDKTTA 1100
>gi|166851804 tudor domain containing 9 [Homo sapiens]
Length = 1382
Score = 73.2 bits (178), Expect = 8e-13
Identities = 89/342 (26%), Positives = 140/342 (40%), Gaps = 41/342 (11%)
Query: 264 VLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQA---VYEDMDARKV 320
VLVFLP EI+ E L+ V L +V PLH Q + RK+
Sbjct: 388 VLVFLPGLGEINYMHELLTSLVHKRL------QVYPLHSSVALEEQNNVFLSPVPGYRKI 441
Query: 321 VVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFP 380
+++ +A+ S ++P +++VID L V + + L SK R+ RA
Sbjct: 442 ILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVS 501
Query: 381 PGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAP---- 436
G C L K F + P P + L S +L +K + EP P
Sbjct: 502 RGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSD 561
Query: 437 -EALMQALEDLDYLAALDD-------DGDLSDLGVILSEFPLAPELAKALLASCEFDCVD 488
E + L+++ LA DG+L+ LG +L++ P+ +L K ++ F C+D
Sbjct: 562 IERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLD 621
Query: 489 EMLTLAAMLTAAPGFTRPPLSAEEAALRRALEHTDGDHSSLIQVYEAFIQSGADEAW--C 546
E L +AA L + F P R + + S I + EAF + W C
Sbjct: 622 ECLIIAAAL-SLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAF------KTWKAC 674
Query: 547 QARG--------LNWAAL--CQAHKLRGELLELMQRIELPLS 578
+ G LNW L Q ++R E+ EL + ++ +S
Sbjct: 675 RQTGELRYPKDELNWGRLNYIQIKRIR-EVAELYEELKTRIS 715
Score = 71.6 bits (174), Expect = 2e-12
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 13 GPSPGESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEP 72
GP P S ++ +P ++ Y LPI + + +ESN VV++ G
Sbjct: 106 GPGPRPSLAKLSSVTCIPGTTYKYP------DLPISRYKEEVVSLIESN--SVVIIHGAT 157
Query: 73 GSGKSTQIPQWCAEFALARGFQKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIP 132
GSGKSTQ+PQ+ + + R + VTQP + A S+A ++ E TLG VGY +
Sbjct: 158 GSGKSTQLPQYILDHYVQRSAYCS-IVVTQPRKIGASSIARWISKERAWTLGGVVGYQVG 216
Query: 133 QEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSL 182
E +T L + +LLQ++ S + + +++DE ER+ D L
Sbjct: 217 LEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFTHIIIDEVHERTEEMDFL 266
>gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo
sapiens]
Length = 607
Score = 32.3 bits (72), Expect = 1.6
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 103 PYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGP--NTLLRFCWDRLLLQEVASTRG 160
PY +A RS+ L E T + G ++ C + L + CW R+ L E+ S G
Sbjct: 503 PYVIALRSVTLPTHRE---TPEYRRGETLCSGFCLWREGDQLTKCCWVRVSLTELVSASG 559
Query: 161 TGAWGVLVLDEAQERSVASDSLQGLLQDARLEKL 194
+WG+ E++ + SD G L L L
Sbjct: 560 FYSWGL----ESRSKGRRSDGWNGKLAGGHLSTL 589
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 31.2 bits (69), Expect = 3.5
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 17 GESELAVNPFDGLPFSSRYYELLKQRQALP-----IWA-ARFTFLEQLESNPTGVVLVSG 70
G +A+NPF LP + Y + + Q L ++A A + L +++SG
Sbjct: 180 GSILVAINPFKFLPIYNPKYVKMYENQQLGKLEPHVFALADVAYYTMLRKRVNQCIVISG 239
Query: 71 EPGSGK--STQIPQWCAEFALARGFQKG 96
E GSGK ST C +G+ G
Sbjct: 240 ESGSGKTQSTNFLIHCLTALSQKGYASG 267
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 31.2 bits (69), Expect = 3.5
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 17 GESELAVNPFDGLPFSSRYYELLKQRQALP-----IWA-ARFTFLEQLESNPTGVVLVSG 70
G +A+NPF LP + Y + + Q L ++A A + L +++SG
Sbjct: 180 GSILVAINPFKFLPIYNPKYVKMYENQQLGKLEPHVFALADVAYYTMLRKRVNQCIVISG 239
Query: 71 EPGSGK--STQIPQWCAEFALARGFQKG 96
E GSGK ST C +G+ G
Sbjct: 240 ESGSGKTQSTNFLIHCLTALSQKGYASG 267
>gi|11345454 Fanconi anemia, complementation group E [Homo sapiens]
Length = 536
Score = 31.2 bits (69), Expect = 3.5
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 389 PKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLD------QPAPEALMQA 442
P LEL+ L PR+C+ NL SL L+ R + E G L P P+A ++A
Sbjct: 77 PDGRLELKPLLLRLPRICQRNLMSL-LMAVRPSLPESGLLSVLQIAQQDLAPDPDAWLRA 135
Query: 443 LEDL 446
L +L
Sbjct: 136 LGEL 139
>gi|23397678 signal transducer and activator of transcription 6
[Homo sapiens]
Length = 847
Score = 30.8 bits (68), Expect = 4.6
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 629 CYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQ---MLVELAPPYFLSNLPPSESR 685
C A + P P +L + T+ +D+CLS PQ + ++ PP LPP+E +
Sbjct: 747 CQPQEHAVSSPDP-LLCSDVTMVEDSCLSQPVTAFPQGTWIGEDIFPPL----LPPTE-Q 800
Query: 686 DLLNQLREGMADSTAGS 702
DL L EG +S GS
Sbjct: 801 DLTKLLLEGQGESGGGS 817
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 30.0 bits (66), Expect = 7.8
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 470 LAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRRALEHTDGD---- 525
LA A+ +L F D+ T +LT +PPLS E+A + +L T D
Sbjct: 387 LAENQAQPML---RFQTEDDARTGEKVLTCYLLPQQPPLSLEDAGQQGSLSETWSDAPPS 443
Query: 526 HSSLIQVYEAFI-QSGADEAWCQARGLNWAALCQAHKLR 563
S+IQ EA I A+EA + RGL A +L+
Sbjct: 444 RVSVIQFLEAPIGDEDAEEAAAEKRGLQRRATPHPSELK 482
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 30.0 bits (66), Expect = 7.8
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 470 LAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRRALEHTDGD---- 525
LA A+ +L F D+ T +LT +PPLS E+A + +L T D
Sbjct: 387 LAENQAQPML---RFQTEDDARTGEKVLTCYLLPQQPPLSLEDAGQQGSLSETWSDAPPS 443
Query: 526 HSSLIQVYEAFI-QSGADEAWCQARGLNWAALCQAHKLR 563
S+IQ EA I A+EA + RGL A +L+
Sbjct: 444 RVSVIQFLEAPIGDEDAEEAAAEKRGLQRRATPHPSELK 482
>gi|169234951 coiled-coil domain containing 17 [Homo sapiens]
Length = 590
Score = 30.0 bits (66), Expect = 7.8
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 150 LLLQEVASTRG-TGAW-GVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPA 207
L LQ + RG GA G L + EA+ R + ++ L +Q R P DLR ++ D +
Sbjct: 245 LELQRSQTRRGRAGATSGELPVVEAENRRLEAEILALQMQRGRAPLGPQDLR--LLGDAS 302
Query: 208 LEPKLRAFWGNPPIVHIPREPGERPSP 234
L+PK R +PP++ P P P P
Sbjct: 303 LQPKGRR---DPPLLPPPVAPPLPPLP 326
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,097,532
Number of Sequences: 37866
Number of extensions: 1556321
Number of successful extensions: 3851
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3703
Number of HSP's gapped (non-prelim): 43
length of query: 717
length of database: 18,247,518
effective HSP length: 110
effective length of query: 607
effective length of database: 14,082,258
effective search space: 8547930606
effective search space used: 8547930606
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.