Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 163644313
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|163644313 calcium and integrin binding 1 [Homo sapiens]
(191 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|163644313 calcium and integrin binding 1 [Homo sapiens] 374 e-104
gi|71274156 calcium and integrin binding family member 4 [Homo s... 147 4e-36
gi|16930817 DNA-dependent protein kinase catalytic subunit-inter... 134 4e-32
gi|5453708 DNA-dependent protein kinase catalytic subunit-intera... 134 5e-32
gi|4506025 protein phosphatase 3, regulatory subunit B, alpha is... 75 4e-14
gi|22212896 protein phosphatase 3 regulatory subunit B, beta iso... 67 9e-12
gi|6005731 calcium binding protein P22 [Homo sapiens] 62 2e-10
gi|17738308 frequenin homolog isoform 1 [Homo sapiens] 60 9e-10
gi|7705419 hippocalcin-like protein 4 [Homo sapiens] 57 1e-08
gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo sapi... 56 2e-08
gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo sap... 55 5e-08
gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo sap... 54 6e-08
gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo sap... 54 6e-08
gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo sap... 54 6e-08
gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo sap... 54 6e-08
gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo sap... 54 6e-08
gi|19913443 hippocalcin-like 1 [Homo sapiens] 54 8e-08
gi|19913441 hippocalcin-like 1 [Homo sapiens] 54 8e-08
gi|78190478 Kv channel interacting protein 1 isoform 3 [Homo sap... 53 2e-07
gi|78190480 Kv channel interacting protein 1 isoform 1 [Homo sap... 53 2e-07
gi|7657247 Kv channel interacting protein 1 isoform 2 [Homo sapi... 53 2e-07
gi|21361559 visinin-like 1 [Homo sapiens] 52 3e-07
gi|124256482 diacylglycerol kinase gamma isoform 3 [Homo sapiens] 52 3e-07
gi|124256474 diacylglycerol kinase gamma isoform 2 [Homo sapiens] 52 3e-07
gi|124256476 diacylglycerol kinase gamma isoform 1 [Homo sapiens] 52 3e-07
gi|19913446 hippocalcin [Homo sapiens] 52 3e-07
gi|22027634 diacylglycerol kinase, beta isoform 2 [Homo sapiens] 51 5e-07
gi|22027632 diacylglycerol kinase, beta isoform 1 [Homo sapiens] 51 5e-07
gi|98985795 neurocalcin delta [Homo sapiens] 51 7e-07
gi|98985793 neurocalcin delta [Homo sapiens] 51 7e-07
>gi|163644313 calcium and integrin binding 1 [Homo sapiens]
Length = 191
Score = 374 bits (961), Expect = e-104
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS
Sbjct: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
Query: 61 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 120
LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD
Sbjct: 61 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 120
Query: 121 GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 180
GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS
Sbjct: 121 GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 180
Query: 181 PDFASSFKIVL 191
PDFASSFKIVL
Sbjct: 181 PDFASSFKIVL 191
>gi|71274156 calcium and integrin binding family member 4 [Homo
sapiens]
Length = 185
Score = 147 bits (372), Expect = 4e-36
Identities = 79/179 (44%), Positives = 115/179 (64%), Gaps = 10/179 (5%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFK 70
E L EYQ LTFLT+ EIL H F +L P + E++L +Q+ SLP L+ NPF+
Sbjct: 12 EDLEEYQALTFLTRNEILCIHDTFLKLCPPGKYYKEATLT----MDQVSSLPALRVNPFR 67
Query: 71 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSR 130
+RICRVFS K SFED L + SVFS+ A P +K YAFRI+DF+++G ++ EDL R
Sbjct: 68 DRICRVFSH---KGMFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEEDLQR 124
Query: 131 LVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKI 189
++ L + +S + L +++L ESD+D D ++ SEF+H +++SPDF +SF+I
Sbjct: 125 IILRLLNSDD---MSEDLLMDLTNHVLSESDLDNDNMLSFSEFEHAMAKSPDFMNSFRI 180
>gi|16930817 DNA-dependent protein kinase catalytic
subunit-interacting protein 3 [Homo sapiens]
Length = 187
Score = 134 bits (338), Expect = 4e-32
Identities = 76/190 (40%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQ-EQRSVESSLRAQVPFEQIL 59
MG + + E L YQD TF T++EI+ R+ +L PQ + +VP+E I
Sbjct: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
Query: 60 SLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDD 119
S+PELK NPF++RI +VFS ++ ++FLD+ SV S+ A D+K++YAF+I+DF++
Sbjct: 61 SMPELKDNPFRQRIAQVFSED-GDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNN 119
Query: 120 DGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 179
D + DL + V LT G LSA E+ + + +L+E+D D DG ++L +FQ++I R
Sbjct: 120 DDYICAWDLEQTVTKLTRGG----LSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILR 175
Query: 180 SPDFASSFKI 189
+PDF S+F I
Sbjct: 176 APDFLSTFHI 185
>gi|5453708 DNA-dependent protein kinase catalytic
subunit-interacting protein 2 [Homo sapiens]
Length = 187
Score = 134 bits (337), Expect = 5e-32
Identities = 72/190 (37%), Positives = 113/190 (59%), Gaps = 6/190 (3%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQ-EQRSVESSLRAQVPFEQIL 59
MG + ++E L YQD TF K++IL H RF EL P S VP I+
Sbjct: 1 MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSLII 60
Query: 60 SLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDD 119
+PEL+ NPFKERI FS + +L+F DF+D+ SV ++A ++K++YAF+I+DF+
Sbjct: 61 QMPELRENPFKERIVAAFSED-GEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNT 119
Query: 120 DGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 179
D + +EDL + LT + L E+ + D ++EE+D+D DG + ++F+ +I++
Sbjct: 120 DNFICKEDLELTLARLT----KSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAK 175
Query: 180 SPDFASSFKI 189
+PDF S+F I
Sbjct: 176 APDFLSTFHI 185
>gi|4506025 protein phosphatase 3, regulatory subunit B, alpha
isoform 1 [Homo sapiens]
Length = 170
Score = 74.7 bits (182), Expect = 4e-14
Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 56 EQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIF 115
E+ +SLPEL+ NP +R+ +F T + F++F++ +S FS + K +AFRI+
Sbjct: 41 EEFMSLPELQQNPLVQRVIDIFDTD-GNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIY 99
Query: 116 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 175
D D DG ++ +L +++ + G L ++++Q++D + +D D DG I+ EF
Sbjct: 100 DMDKDGYISNGELFQVLKMMVG----NNLKDTQLQQIVDKTIINADKDGDGRISFEEFCA 155
Query: 176 VI 177
V+
Sbjct: 156 VV 157
>gi|22212896 protein phosphatase 3 regulatory subunit B, beta
isoform [Homo sapiens]
Length = 173
Score = 67.0 bits (162), Expect = 9e-12
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 56 EQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIF 115
E+ +SLPEL+ NP R+ VF T + F++F+ S FS + K +AF I+
Sbjct: 44 EEFMSLPELRHNPLVRRVIDVFDTD-GDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIY 102
Query: 116 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 175
D D DG ++ +L +++ + G L+ +++QL+D + D D DG I+ EF
Sbjct: 103 DMDKDGYISNGELFQVLKMMVG----NNLTDWQLQQLVDKTIIILDKDGDGKISFEEFSA 158
Query: 176 VI 177
V+
Sbjct: 159 VV 160
>gi|6005731 calcium binding protein P22 [Homo sapiens]
Length = 195
Score = 62.4 bits (150), Expect = 2e-10
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 1 MGGSGSRLSK-ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQIL 59
MG S L + E L E + T + +I + RF L E ++ E
Sbjct: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSR--------EDFQ 52
Query: 60 SLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVF---------SDTATPDI---- 106
+PEL NP +RI F +D ++F F+ L+ F D P+
Sbjct: 53 RIPELAINPLGDRIINAFFPE-GEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSR 111
Query: 107 --KSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDR 164
K H+AFR++D D D ++R++L +++ + G +S ++ + D ++E+D D
Sbjct: 112 SNKLHFAFRLYDLDKDEKISRDELLQVLRMMVG----VNISDEQLGSIADRTIQEADQDG 167
Query: 165 DGTINLSEFQHVISR 179
D I+ +EF V+ +
Sbjct: 168 DSAISFTEFVKVLEK 182
>gi|17738308 frequenin homolog isoform 1 [Homo sapiens]
Length = 190
Score = 60.5 bits (145), Expect = 9e-10
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 12/193 (6%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
MG S S+L E++ E T+ T++E+ ++ F + P Q + F
Sbjct: 1 MGKSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQF----- 55
Query: 61 LPELKANPFKERICRVFSTSPAKDS-LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDD 119
P F + VF + KD + F +F+ LSV S T D K +AF+++D D+
Sbjct: 56 FPFGDPTKFATFVFNVFDEN--KDGRIEFSEFIQALSVTS-RGTLDEKLRWAFKLYDLDN 112
Query: 120 DGTLNREDLSRLVNC---LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHV 176
DG + R ++ +V+ + G + + ++ +D I D + DG + L EFQ
Sbjct: 113 DGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEG 172
Query: 177 ISRSPDFASSFKI 189
P + +
Sbjct: 173 SKADPSIVQALSL 185
>gi|7705419 hippocalcin-like protein 4 [Homo sapiens]
Length = 191
Score = 57.0 bits (136), Expect = 1e-08
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
MG + S+L+ E+L + T ++QE+ ++ F + P ++E + + F
Sbjct: 1 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKF----- 55
Query: 61 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 120
P A+ F + R F + ++ F +F+ LSV S + + K ++AF ++D D D
Sbjct: 56 FPYGDASKFAQHAFRTFDKN-GDGTIDFREFICALSVTS-RGSFEQKLNWAFEMYDLDGD 113
Query: 121 GTLNREDLSRLVNCL---TGEGEDTRLSASEM--KQLIDNILEESDIDRDGTINLSEFQH 175
G + R ++ ++ + G R++ + +Q +D I ++ D D+D I L EF+
Sbjct: 114 GRITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKE 173
Query: 176 VISRSP 181
P
Sbjct: 174 AAKSDP 179
>gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo
sapiens]
Length = 196
Score = 56.2 bits (134), Expect = 2e-08
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 29/170 (17%)
Query: 20 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFST 79
T ++ +L H RF R+++ + + + + + L NP +RI F
Sbjct: 21 TGFSQASLLRLHHRF--------RALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFP 72
Query: 80 SPAKDSLSFEDFLDLLSVF-----SDTATPDIKS-----------HYAFRIFDFDDDGTL 123
++ + F F+ +L+ F DT T D K HYAF+++D D DG +
Sbjct: 73 DGSQ-RVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKI 131
Query: 124 NREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 173
+R ++ +++ + G +++ +++ + D ++E+D D DG ++ EF
Sbjct: 132 SRHEMLQVLRLMVG----VQVTEEQLENIADRTVQEADEDGDGAVSFVEF 177
>gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo
sapiens]
Length = 227
Score = 54.7 bits (130), Expect = 5e-08
Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS--LPELKANP 68
E L + Q+ T T++E+ + +R F + S + + F+QI S P+ ++
Sbjct: 41 EGLEQLQEQTKFTRKELQVLYRGFKNPGALSFQECPSGIVNEENFKQIYSQFFPQGDSST 100
Query: 69 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE-- 126
+ + F T+ S+SFEDF+ LSV T D + ++AF ++D + DG + +E
Sbjct: 101 YATFLFNAFDTNH-DGSVSFEDFVAGLSVIL-RGTVDDRLNWAFNLYDLNKDGCITKEEM 158
Query: 127 -DLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 185
D+ + + + G+ L ++ +++ ++ D ++DG + + EF + +
Sbjct: 159 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMR 218
Query: 186 SFKI 189
S ++
Sbjct: 219 SMQL 222
>gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo
sapiens]
Length = 225
Score = 54.3 bits (129), Expect = 6e-08
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS--LPELKANP 68
E L + Q+ T T++E+ + +R F P S + + F+QI S P+ ++
Sbjct: 46 EGLEQLQEQTKFTRKELQVLYRGFKNECP-------SGIVNEENFKQIYSQFFPQGDSST 98
Query: 69 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE-- 126
+ + F T+ S+SFEDF+ LSV T D + ++AF ++D + DG + +E
Sbjct: 99 YATFLFNAFDTNH-DGSVSFEDFVAGLSVIL-RGTVDDRLNWAFNLYDLNKDGCITKEEM 156
Query: 127 -DLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 185
D+ + + + G+ L ++ +++ ++ D ++DG + + EF + +
Sbjct: 157 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMR 216
Query: 186 SFKI 189
S ++
Sbjct: 217 SMQL 220
>gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo
sapiens]
Length = 220
Score = 54.3 bits (129), Expect = 6e-08
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS--LPELKANP 68
E L + Q+ T T++E+ + +R F P S + + F+QI S P+ ++
Sbjct: 41 EGLEQLQEQTKFTRKELQVLYRGFKNECP-------SGIVNEENFKQIYSQFFPQGDSST 93
Query: 69 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE-- 126
+ + F T+ S+SFEDF+ LSV T D + ++AF ++D + DG + +E
Sbjct: 94 YATFLFNAFDTNH-DGSVSFEDFVAGLSVIL-RGTVDDRLNWAFNLYDLNKDGCITKEEM 151
Query: 127 -DLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 185
D+ + + + G+ L ++ +++ ++ D ++DG + + EF + +
Sbjct: 152 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMR 211
Query: 186 SFKI 189
S ++
Sbjct: 212 SMQL 215
>gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo
sapiens]
Length = 252
Score = 54.3 bits (129), Expect = 6e-08
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS--LPELKANP 68
E L + Q+ T T++E+ + +R F P S + + F+QI S P+ ++
Sbjct: 73 EGLEQLQEQTKFTRKELQVLYRGFKNECP-------SGIVNEENFKQIYSQFFPQGDSST 125
Query: 69 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE-- 126
+ + F T+ S+SFEDF+ LSV T D + ++AF ++D + DG + +E
Sbjct: 126 YATFLFNAFDTNH-DGSVSFEDFVAGLSVIL-RGTVDDRLNWAFNLYDLNKDGCITKEEM 183
Query: 127 -DLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 185
D+ + + + G+ L ++ +++ ++ D ++DG + + EF + +
Sbjct: 184 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMR 243
Query: 186 SFKI 189
S ++
Sbjct: 244 SMQL 247
>gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo
sapiens]
Length = 285
Score = 54.3 bits (129), Expect = 6e-08
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS--LPELKANP 68
E L + Q+ T T++E+ + +R F P S + + F+QI S P+ ++
Sbjct: 106 EGLEQLQEQTKFTRKELQVLYRGFKNECP-------SGIVNEENFKQIYSQFFPQGDSST 158
Query: 69 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE-- 126
+ + F T+ S+SFEDF+ LSV T D + ++AF ++D + DG + +E
Sbjct: 159 YATFLFNAFDTNH-DGSVSFEDFVAGLSVIL-RGTVDDRLNWAFNLYDLNKDGCITKEEM 216
Query: 127 -DLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 185
D+ + + + G+ L ++ +++ ++ D ++DG + + EF + +
Sbjct: 217 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMR 276
Query: 186 SFKI 189
S ++
Sbjct: 277 SMQL 280
>gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo
sapiens]
Length = 270
Score = 54.3 bits (129), Expect = 6e-08
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS--LPELKANP 68
E L + Q+ T T++E+ + +R F P S + + F+QI S P+ ++
Sbjct: 91 EGLEQLQEQTKFTRKELQVLYRGFKNECP-------SGIVNEENFKQIYSQFFPQGDSST 143
Query: 69 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE-- 126
+ + F T+ S+SFEDF+ LSV T D + ++AF ++D + DG + +E
Sbjct: 144 YATFLFNAFDTNH-DGSVSFEDFVAGLSVIL-RGTVDDRLNWAFNLYDLNKDGCITKEEM 201
Query: 127 -DLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 185
D+ + + + G+ L ++ +++ ++ D ++DG + + EF + +
Sbjct: 202 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMR 261
Query: 186 SFKI 189
S ++
Sbjct: 262 SMQL 265
>gi|19913443 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 53.9 bits (128), Expect = 8e-08
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
MG S+L E+L + ++ T T E+ ++ F + P +V+ + F
Sbjct: 1 MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLTVDEFKKIYANF----- 55
Query: 61 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 120
P A+ F E + R F T+ ++ F +F+ LSV S + K +AF ++D D +
Sbjct: 56 FPYGDASKFAEHVFRTFDTN-GDGTIDFREFIIALSVTS-RGKLEQKLKWAFSMYDLDGN 113
Query: 121 GTLNREDLSRLVNCLTGEGEDTRLSASEMK---------QLIDNILEESDIDRDGTINLS 171
G ++R ++ +V + ++ +S MK + D I + D + DG ++L
Sbjct: 114 GYISRSEMLEIVQAI------YKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLE 167
Query: 172 EF 173
EF
Sbjct: 168 EF 169
>gi|19913441 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 53.9 bits (128), Expect = 8e-08
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
MG S+L E+L + ++ T T E+ ++ F + P +V+ + F
Sbjct: 1 MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLTVDEFKKIYANF----- 55
Query: 61 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 120
P A+ F E + R F T+ ++ F +F+ LSV S + K +AF ++D D +
Sbjct: 56 FPYGDASKFAEHVFRTFDTN-GDGTIDFREFIIALSVTS-RGKLEQKLKWAFSMYDLDGN 113
Query: 121 GTLNREDLSRLVNCLTGEGEDTRLSASEMK---------QLIDNILEESDIDRDGTINLS 171
G ++R ++ +V + ++ +S MK + D I + D + DG ++L
Sbjct: 114 GYISRSEMLEIVQAI------YKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLE 167
Query: 172 EF 173
EF
Sbjct: 168 EF 169
>gi|78190478 Kv channel interacting protein 1 isoform 3 [Homo
sapiens]
Length = 225
Score = 52.8 bits (125), Expect = 2e-07
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS--LPELKANP 68
E L + + T TK+E+ + +R F P S + + F+QI + P A+
Sbjct: 46 EGLEQLEAQTNFTKRELQVLYRGFKNECP-------SGVVNEDTFKQIYAQFFPHGDAST 98
Query: 69 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 128
+ + F T+ S+ FEDF+ LS+ T K + F ++D + DG +N+E++
Sbjct: 99 YAHYLFNAFDTTQT-GSVKFEDFVTALSILL-RGTVHEKLRWTFNLYDINKDGYINKEEM 156
Query: 129 SRLVNC---LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 173
+V + G+ L +Q +D ++ D ++DG + L EF
Sbjct: 157 MDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 204
Score = 28.5 bits (62), Expect = 3.7
Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 9/99 (9%)
Query: 89 EDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASE 148
+ F + + F +HY F FD G++ ED ++ L R + E
Sbjct: 81 DTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL------RGTVHE 134
Query: 149 MKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSF 187
+ N+ DI++DG IN E ++ D +
Sbjct: 135 KLRWTFNLY---DINKDGYINKEEMMDIVKAIYDMMGKY 170
>gi|78190480 Kv channel interacting protein 1 isoform 1 [Homo
sapiens]
Length = 227
Score = 52.8 bits (125), Expect = 2e-07
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS--LPELKANP 68
E L + + T TK+E+ + +R F P S + + F+QI + P A+
Sbjct: 48 EGLEQLEAQTNFTKRELQVLYRGFKNECP-------SGVVNEDTFKQIYAQFFPHGDAST 100
Query: 69 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 128
+ + F T+ S+ FEDF+ LS+ T K + F ++D + DG +N+E++
Sbjct: 101 YAHYLFNAFDTTQT-GSVKFEDFVTALSILL-RGTVHEKLRWTFNLYDINKDGYINKEEM 158
Query: 129 SRLVNC---LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 173
+V + G+ L +Q +D ++ D ++DG + L EF
Sbjct: 159 MDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 206
Score = 28.5 bits (62), Expect = 3.7
Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 9/99 (9%)
Query: 89 EDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASE 148
+ F + + F +HY F FD G++ ED ++ L R + E
Sbjct: 83 DTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL------RGTVHE 136
Query: 149 MKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSF 187
+ N+ DI++DG IN E ++ D +
Sbjct: 137 KLRWTFNLY---DINKDGYINKEEMMDIVKAIYDMMGKY 172
>gi|7657247 Kv channel interacting protein 1 isoform 2 [Homo
sapiens]
Length = 216
Score = 52.8 bits (125), Expect = 2e-07
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 11 ELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS--LPELKANP 68
E L + + T TK+E+ + +R F P S + + F+QI + P A+
Sbjct: 37 EGLEQLEAQTNFTKRELQVLYRGFKNECP-------SGVVNEDTFKQIYAQFFPHGDAST 89
Query: 69 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 128
+ + F T+ S+ FEDF+ LS+ T K + F ++D + DG +N+E++
Sbjct: 90 YAHYLFNAFDTTQT-GSVKFEDFVTALSILL-RGTVHEKLRWTFNLYDINKDGYINKEEM 147
Query: 129 SRLVNC---LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 173
+V + G+ L +Q +D ++ D ++DG + L EF
Sbjct: 148 MDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
Score = 29.3 bits (64), Expect = 2.2
Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 18/163 (11%)
Query: 34 FCELLPQEQRSVESSLRAQVPFEQILSLPE----LKANP-FKER----ICRVFSTSPAKD 84
F L +++R + + ++ + PE L+A F +R + R F
Sbjct: 8 FSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSG 67
Query: 85 SLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRL 144
++ + F + + F +HY F FD G++ ED ++ L R
Sbjct: 68 VVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL------RG 121
Query: 145 SASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSF 187
+ E + N+ DI++DG IN E ++ D +
Sbjct: 122 TVHEKLRWTFNLY---DINKDGYINKEEMMDIVKAIYDMMGKY 161
>gi|21361559 visinin-like 1 [Homo sapiens]
Length = 191
Score = 52.0 bits (123), Expect = 3e-07
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
MG S+L+ E++ + T + E+ ++ F + P + ++E + V F
Sbjct: 1 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKF----- 55
Query: 61 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 120
P A+ F + R F + ++ F +F+ LS+ S + + K ++AF ++D D D
Sbjct: 56 FPYGDASKFAQHAFRTFDKN-GDGTIDFREFICALSITS-RGSFEQKLNWAFNMYDLDGD 113
Query: 121 GTLNREDLSRLVNCL-TGEGEDTRLSASE----MKQLIDNILEESDIDRDGTINLSEFQH 175
G + R ++ ++ + G + +E +Q +D I + D ++D I L EF+
Sbjct: 114 GKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKE 173
Query: 176 VISRSP 181
P
Sbjct: 174 AAKSDP 179
>gi|124256482 diacylglycerol kinase gamma isoform 3 [Homo sapiens]
Length = 752
Score = 52.0 bits (123), Expect = 3e-07
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 63 ELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGT 122
++ A P + + R S+S + +D + LS+ +T P K + FR++D D++G
Sbjct: 138 QVAATPLEPPVPR--SSSSESPVVYLKDVVCYLSLL-ETGRPQDKLEFMFRLYDSDENGL 194
Query: 123 LNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 175
L++ ++ +VN + + +E++ ++ +L+ D DRDG ++L E+ H
Sbjct: 195 LDQAEMDCIVNQMLHIAQYLEWDPTELRPILKEMLQGMDYDRDGFVSLQEWVH 247
>gi|124256474 diacylglycerol kinase gamma isoform 2 [Homo sapiens]
Length = 766
Score = 52.0 bits (123), Expect = 3e-07
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 63 ELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGT 122
++ A P + + R S+S + +D + LS+ +T P K + FR++D D++G
Sbjct: 138 QVAATPLEPPVPR--SSSSESPVVYLKDVVCYLSLL-ETGRPQDKLEFMFRLYDSDENGL 194
Query: 123 LNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 175
L++ ++ +VN + + +E++ ++ +L+ D DRDG ++L E+ H
Sbjct: 195 LDQAEMDCIVNQMLHIAQYLEWDPTELRPILKEMLQGMDYDRDGFVSLQEWVH 247
>gi|124256476 diacylglycerol kinase gamma isoform 1 [Homo sapiens]
Length = 791
Score = 52.0 bits (123), Expect = 3e-07
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 63 ELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGT 122
++ A P + + R S+S + +D + LS+ +T P K + FR++D D++G
Sbjct: 138 QVAATPLEPPVPR--SSSSESPVVYLKDVVCYLSLL-ETGRPQDKLEFMFRLYDSDENGL 194
Query: 123 LNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 175
L++ ++ +VN + + +E++ ++ +L+ D DRDG ++L E+ H
Sbjct: 195 LDQAEMDCIVNQMLHIAQYLEWDPTELRPILKEMLQGMDYDRDGFVSLQEWVH 247
>gi|19913446 hippocalcin [Homo sapiens]
Length = 193
Score = 52.0 bits (123), Expect = 3e-07
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
MG S+L E+L + ++ T ++ E+ ++ F + P +V+ + F
Sbjct: 1 MGKQNSKLRPEMLQDLRENTEFSELELQEWYKGFLKDCPTGILNVDEFKKIYANF----- 55
Query: 61 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 120
P A+ F E + R F T+ + ++ F +F+ LSV S + K +AF ++D D +
Sbjct: 56 FPYGDASKFAEHVFRTFDTN-SDGTIDFREFIIALSVTS-RGRLEQKLMWAFSMYDLDGN 113
Query: 121 GTLNREDLSRLVNCLTGEGEDTRLSASEMK---------QLIDNILEESDIDRDGTINLS 171
G ++RE++ +V + ++ +S MK + + I + D + DG ++L
Sbjct: 114 GYISREEMLEIVQAI------YKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKLSLE 167
Query: 172 EF 173
EF
Sbjct: 168 EF 169
>gi|22027634 diacylglycerol kinase, beta isoform 2 [Homo sapiens]
Length = 773
Score = 51.2 bits (121), Expect = 5e-07
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 78 STSPAK----DSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN 133
+TSPA + + +D + LS+ + P+ K + FR++D D +G L+ +L +++
Sbjct: 121 TTSPANTCSPEVIHLKDIVCYLSLL-ERGRPEDKLEFMFRLYDTDGNGFLDSSELENIIS 179
Query: 134 CLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 173
+ E +E+ ++ ++EE D D DGT++L E+
Sbjct: 180 QMMHVAEYLEWDVTELNPILHEMMEEIDYDHDGTVSLEEW 219
>gi|22027632 diacylglycerol kinase, beta isoform 1 [Homo sapiens]
Length = 804
Score = 51.2 bits (121), Expect = 5e-07
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 78 STSPAK----DSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN 133
+TSPA + + +D + LS+ + P+ K + FR++D D +G L+ +L +++
Sbjct: 121 TTSPANTCSPEVIHLKDIVCYLSLL-ERGRPEDKLEFMFRLYDTDGNGFLDSSELENIIS 179
Query: 134 CLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 173
+ E +E+ ++ ++EE D D DGT++L E+
Sbjct: 180 QMMHVAEYLEWDVTELNPILHEMMEEIDYDHDGTVSLEEW 219
>gi|98985795 neurocalcin delta [Homo sapiens]
Length = 193
Score = 50.8 bits (120), Expect = 7e-07
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
MG S+L E++ + + T T+ EI ++ F P S+E + F
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNF----- 55
Query: 61 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 120
P A+ F E + R F + ++ F +F+ LSV S + K +AF ++D D +
Sbjct: 56 FPYGDASKFAEHVFRTFDAN-GDGTIDFREFIIALSVTS-RGKLEQKLKWAFSMYDLDGN 113
Query: 121 GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN---------ILEESDIDRDGTINLS 171
G +++ ++ +V + ++ +S MK D I + D +RDG ++L
Sbjct: 114 GYISKAEMLEIVQAIY------KMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLE 167
Query: 172 EF 173
EF
Sbjct: 168 EF 169
Score = 27.3 bits (59), Expect = 8.2
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 86 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLN-REDLSRLVNCLTGEGEDTRL 144
LS E+F + F + + FR FD + DGT++ RE + L +
Sbjct: 43 LSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIAL----------SVT 92
Query: 145 SASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASS 186
S +++Q + D+D +G I+ +E ++ SS
Sbjct: 93 SRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSS 134
>gi|98985793 neurocalcin delta [Homo sapiens]
Length = 193
Score = 50.8 bits (120), Expect = 7e-07
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 60
MG S+L E++ + + T T+ EI ++ F P S+E + F
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNF----- 55
Query: 61 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 120
P A+ F E + R F + ++ F +F+ LSV S + K +AF ++D D +
Sbjct: 56 FPYGDASKFAEHVFRTFDAN-GDGTIDFREFIIALSVTS-RGKLEQKLKWAFSMYDLDGN 113
Query: 121 GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN---------ILEESDIDRDGTINLS 171
G +++ ++ +V + ++ +S MK D I + D +RDG ++L
Sbjct: 114 GYISKAEMLEIVQAIY------KMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLE 167
Query: 172 EF 173
EF
Sbjct: 168 EF 169
Score = 27.3 bits (59), Expect = 8.2
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 86 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLN-REDLSRLVNCLTGEGEDTRL 144
LS E+F + F + + FR FD + DGT++ RE + L +
Sbjct: 43 LSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIAL----------SVT 92
Query: 145 SASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASS 186
S +++Q + D+D +G I+ +E ++ SS
Sbjct: 93 SRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSS 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,723,123
Number of Sequences: 37866
Number of extensions: 279180
Number of successful extensions: 1221
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 1004
Number of HSP's gapped (non-prelim): 227
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.