Guide to the Human Genome
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Name: ACVR1B Sequence: fasta or formatted (476aa) NCBI GI: 33598910
Description:

activin A receptor, type IB isoform b precursor

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [487aa] activin A receptor, type IB isoform c precursor
alt prot [505aa] activin A receptor, type IB isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         32           2
 C cysteine            3.4         16           2
 D aspartate           5.5         26           1
 E glutamate           5.9         28           2
 F phenylalanine       3.4         16           2
 G glycine             7.6         36           2
 H histidine           3.4         16           2
 I isoleucine          6.3         30           4
 K lysine              4.0         19           2
 L leucine             9.7         46           3
 M methionine          2.7         13           1
 N asparagine          3.6         17           1
 P proline             4.8         23           2
 Q glutamine           2.9         14           1
 R arginine            5.9         28           2
 S serine              6.7         32           2
 T threonine           4.2         20           1
 V valine              7.6         36           2
 W tryptophan          2.1         10           2
 Y tyrosine            3.8         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activin A receptor, type IB isoform b precursor [Hom... 
ACVR1B                0.973   activin A receptor, type IB isoform a precursor [Homo...
ACVR1B                0.874   activin A receptor, type IB isoform c precursor [Hom...
TGFBR1                0.622   transforming growth factor, beta receptor I isoform 1...
ACVR1C                0.573   activin A receptor, type IC isoform 1 
ACVR1C                0.540   activin A receptor, type IC isoform 2 
TGFBR1                0.505   transforming growth factor, beta receptor I isoform...
ACVR1C                0.457   activin A receptor, type IC isoform 3 
BMPR1B                0.410   bone morphogenetic protein receptor, type IB precurso...
BMPR1A                0.403   bone morphogenetic protein receptor, type IA precurs...
ACVR1                 0.394   activin A receptor, type I precursor 
ACVR1                 0.394   activin A receptor, type I precursor 
ACVRL1                0.366   activin A receptor type II-like 1 
ACVRL1                0.366   activin A receptor type II-like 1 
ACVR1C                0.309   activin A receptor, type IC isoform 4 
TGFBR2                0.189   transforming growth factor, beta receptor II isoform...
TGFBR2                0.189   transforming growth factor, beta receptor II isoform...
ACVR2A                0.189   activin A receptor, type IIA precursor 
ACVR2B                0.186   activin A receptor, type IIB precursor 
BMPR2                 0.160   bone morphogenetic protein receptor type II precurso...
AMHR2                 0.139   anti-Mullerian hormone receptor, type II 
RAF1                  0.059   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
CSK                   0.059   c-src tyrosine kinase 
CSK                   0.059   c-src tyrosine kinase 
ZAK                   0.059   MLK-related kinase isoform 2 
ZAK                   0.059   MLK-related kinase isoform 1 
MAP3K7                0.057   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.057   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.057   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.057   mitogen-activated protein kinase kinase kinase 7 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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