Guide to the Human Genome
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Name: ACVRL1 Sequence: fasta or formatted (503aa) NCBI GI: 116734712
Description:

activin A receptor type II-like 1

Referenced in:

TGF-beta Family

Other entries for this name:
alt mRNA [503aa] activin A receptor type II-like 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         29           2
 C cysteine            3.6         18           2
 D aspartate           4.8         24           1
 E glutamate           5.8         29           2
 F phenylalanine       2.4         12           1
 G glycine             7.8         39           1
 H histidine           3.8         19           1
 I isoleucine          4.0         20           1
 K lysine              3.8         19           2
 L leucine            12.1         61           2
 M methionine          2.0         10           2
 N asparagine          3.2         16           2
 P proline             5.6         28           2
 Q glutamine           4.6         23           2
 R arginine            7.0         35           3
 S serine              6.8         34           2
 T threonine           5.4         27           2
 V valine              7.8         39           2
 W tryptophan          2.0         10           1
 Y tyrosine            2.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activin A receptor type II-like 1 
ACVRL1                1.000   activin A receptor type II-like 1 
ACVR1                 0.548   activin A receptor, type I precursor 
ACVR1                 0.548   activin A receptor, type I precursor 
BMPR1A                0.393   bone morphogenetic protein receptor, type IA precurs...
TGFBR1                0.393   transforming growth factor, beta receptor I isoform 1...
ACVR1B                0.386   activin A receptor, type IB isoform a precursor [Homo...
ACVR1C                0.386   activin A receptor, type IC isoform 1 
BMPR1B                0.385   bone morphogenetic protein receptor, type IB precurso...
ACVR1C                0.383   activin A receptor, type IC isoform 2 
TGFBR1                0.375   transforming growth factor, beta receptor I isoform...
ACVR1C                0.355   activin A receptor, type IC isoform 3 
ACVR1B                0.347   activin A receptor, type IB isoform b precursor [Hom...
ACVR1B                0.300   activin A receptor, type IB isoform c precursor [Hom...
ACVR1C                0.240   activin A receptor, type IC isoform 4 
ACVR2A                0.186   activin A receptor, type IIA precursor 
TGFBR2                0.177   transforming growth factor, beta receptor II isoform...
TGFBR2                0.177   transforming growth factor, beta receptor II isoform...
ACVR2B                0.176   activin A receptor, type IIB precursor 
BMPR2                 0.155   bone morphogenetic protein receptor type II precurso...
AMHR2                 0.120   anti-Mullerian hormone receptor, type II 
RIPK3                 0.065   receptor-interacting serine-threonine kinase 3 [Homo...
MAP3K10               0.065   mitogen-activated protein kinase kinase kinase 10 [H...
CSK                   0.063   c-src tyrosine kinase 
CSK                   0.063   c-src tyrosine kinase 
MAP3K11               0.060   mitogen-activated protein kinase kinase kinase 11 [Ho...
KIAA1804              0.058   mixed lineage kinase 4 
MAP3K9                0.058   mitogen-activated protein kinase kinase kinase 9 [Ho...
FRK                   0.056   fyn-related kinase 
RAF1                  0.055   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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