Guide to the Human Genome
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Name: HECTD3 Sequence: fasta or formatted (861aa) NCBI GI: 157738609
Description:

HECT domain containing 3

Referenced in:

Anaphase-promoting Complex
Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         58           2
 C cysteine            2.2         19           1
 D aspartate           6.4         55           2
 E glutamate           7.8         67           2
 F phenylalanine       3.7         32           2
 G glycine             7.2         62           3
 H histidine           1.5         13           2
 I isoleucine          3.1         27           2
 K lysine              4.8         41           2
 L leucine            11.6        100           3
 M methionine          1.6         14           1
 N asparagine          2.0         17           2
 P proline             5.9         51           2
 Q glutamine           4.1         35           3
 R arginine            7.3         63           2
 S serine              5.9         51           2
 T threonine           4.6         40           2
 V valine              8.1         70           3
 W tryptophan          2.0         17           2
 Y tyrosine            3.4         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HECT domain containing 3 
HERC1                 0.099   guanine nucleotide exchange factor p532 
HERC2                 0.093   hect domain and RLD 2 
HUWE1                 0.050   HECT, UBA and WWE domain containing 1 
C12orf51              0.048   chromosome 12 open reading frame 51 
HACE1                 0.046   HECT domain and ankyrin repeat containing, E3 ubiqu...
UBE3C                 0.041   ubiquitin protein ligase E3C 
CUL7                  0.040   cullin 7 
CUL9                  0.040   p53-associated parkin-like cytoplasmic protein [Homo...
ZZEF1                 0.039   zinc finger, ZZ type with EF hand domain 1 
HECTD2                0.036   HECT domain containing 2 isoform a 
UBE3B                 0.036   ubiquitin protein ligase E3B 
UBE3B                 0.036   ubiquitin protein ligase E3B 
ITCH                  0.035   itchy homolog E3 ubiquitin protein ligase 
WWP2                  0.035   WW domain containing E3 ubiquitin protein ligase 2 i...
WWP2                  0.035   WW domain containing E3 ubiquitin protein ligase 2 i...
NEDD4                 0.035   neural precursor cell expressed, developmentally do...
NEDD4                 0.035   neural precursor cell expressed, developmentally do...
UBE3A                 0.034   ubiquitin protein ligase E3A isoform 3 
UBE3A                 0.034   ubiquitin protein ligase E3A isoform 1 
UBE3A                 0.034   ubiquitin protein ligase E3A isoform 2 
SMURF2                0.033   SMAD specific E3 ubiquitin protein ligase 2 
SMURF1                0.033   Smad ubiquitination regulatory factor 1 isoform 1 [H...
SMURF1                0.033   Smad ubiquitination regulatory factor 1 isoform 2 [H...
UBR5                  0.032   ubiquitin protein ligase E3 component n-recognin 5 [...
LOC730429             0.030   PREDICTED: similar to ubiquitin protein ligase E3 c...
LOC730429             0.030   PREDICTED: similar to ubiquitin protein ligase E3 c...
WWP1                  0.030   WW domain containing E3 ubiquitin protein ligase 1 [...
HECW2                 0.030   HECT, C2 and WW domain containing E3 ubiquitin prote...
TRIP12                0.029   thyroid hormone receptor interactor 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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