UBE3A 11354

Name: UBE3A	Sequence: fasta or formatted (872aa)		NCBI GI: 19718764
Description: ubiquitin protein ligase E3A isoform 3		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [852aa] ubiquitin protein ligase E3A isoform 1 alt prot [875aa] ubiquitin protein ligase E3A isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 49 3 C cysteine 1.9 17 1 D aspartate 6.3 55 3 E glutamate 9.9 86 2 F phenylalanine 4.8 42 2 G glycine 4.9 43 2 H histidine 1.5 13 1 I isoleucine 5.4 47 2 K lysine 7.3 64 2 L leucine 10.6 92 3 M methionine 3.0 26 2 N asparagine 5.8 51 2 P proline 3.9 34 1 Q glutamine 3.0 26 2 R arginine 5.3 46 2 S serine 6.1 53 3 T threonine 4.7 41 2 V valine 5.4 47 2 W tryptophan 0.3 3 1 Y tyrosine 4.2 37 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin protein ligase E3A isoform 3 UBE3A 0.992 ubiquitin protein ligase E3A isoform 2 UBE3A 0.977 ubiquitin protein ligase E3A isoform 1 HECTD2 0.186 HECT domain containing 2 isoform a HERC4 0.160 hect domain and RLD 4 isoform b HERC4 0.158 hect domain and RLD 4 isoform a HERC3 0.147 hect domain and RLD 3 HERC5 0.119 hect domain and RLD 5 HERC6 0.117 hect domain and RLD 6 WWP2 0.109 WW domain containing E3 ubiquitin protein ligase 2 i... WWP2 0.109 WW domain containing E3 ubiquitin protein ligase 2 i... NEDD4L 0.104 neural precursor cell expressed, developmentally do... NEDD4L 0.104 neural precursor cell expressed, developmentally dow... NEDD4L 0.104 neural precursor cell expressed, developmentally do... NEDD4L 0.104 neural precursor cell expressed, developmentally do... NEDD4L 0.104 neural precursor cell expressed, developmentally do... NEDD4L 0.104 neural precursor cell expressed, developmentally do... NEDD4L 0.104 neural precursor cell expressed, developmentally do... NEDD4L 0.104 neural precursor cell expressed, developmentally do... NEDD4L 0.104 neural precursor cell expressed, developmentally do... HUWE1 0.104 HECT, UBA and WWE domain containing 1 WWP1 0.102 WW domain containing E3 ubiquitin protein ligase 1 [... NEDD4 0.102 neural precursor cell expressed, developmentally do... NEDD4 0.102 neural precursor cell expressed, developmentally do... ITCH 0.102 itchy homolog E3 ubiquitin protein ligase SMURF1 0.100 Smad ubiquitination regulatory factor 1 isoform 1 [H... SMURF1 0.100 Smad ubiquitination regulatory factor 1 isoform 2 [H... UBE3C 0.100 ubiquitin protein ligase E3C SMURF2 0.097 SMAD specific E3 ubiquitin protein ligase 2 HACE1 0.097 HECT domain and ankyrin repeat containing, E3 ubiqu... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.