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Search of human proteins with 157502171
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157502171 sorting nexin 19 [Homo sapiens]
(992 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157502171 sorting nexin 19 [Homo sapiens] 1967 0.0
gi|24797145 sorting nexin 14 isoform a [Homo sapiens] 69 2e-11
gi|38708169 sorting nexin 25 [Homo sapiens] 63 1e-09
gi|17864088 sorting nexin 13 [Homo sapiens] 62 2e-09
gi|24797143 sorting nexin 14 isoform b [Homo sapiens] 55 3e-07
gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 53 1e-06
gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 53 1e-06
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 50 8e-06
gi|23111038 sorting nexin 2 [Homo sapiens] 46 2e-04
gi|23111032 sorting nexin 1 isoform b [Homo sapiens] 43 0.001
gi|23238244 sorting nexin 16 isoform a [Homo sapiens] 42 0.003
gi|23238246 sorting nexin 16 isoform a [Homo sapiens] 42 0.003
gi|23111055 sorting nexin 7 isoform b [Homo sapiens] 42 0.004
gi|194294540 sorting nexin 7 isoform a [Homo sapiens] 42 0.004
gi|83367077 mucin 16 [Homo sapiens] 39 0.024
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 39 0.024
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 39 0.024
gi|82830424 gon-4-like isoform a [Homo sapiens] 39 0.032
gi|82830428 gon-4-like isoform b [Homo sapiens] 39 0.032
gi|22547191 sorting nexin 15 isoform A [Homo sapiens] 38 0.041
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 38 0.041
gi|91208420 bassoon protein [Homo sapiens] 37 0.070
gi|31742501 sorting nexin family member 27 [Homo sapiens] 37 0.092
gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1 is... 37 0.092
gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens] 37 0.12
gi|7706706 sorting nexin 9 [Homo sapiens] 37 0.12
gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [H... 37 0.12
gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 37 0.12
gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 37 0.12
gi|4506321 protein tyrosine phosphatase, receptor type, N precur... 36 0.16
>gi|157502171 sorting nexin 19 [Homo sapiens]
Length = 992
Score = 1967 bits (5097), Expect = 0.0
Identities = 992/992 (100%), Positives = 992/992 (100%)
Query: 1 MKTETVPPFQETPAGSSCHLNNLLSSRKLMAVGVLLGWLLVIHLLVNVWLLCLLSALLVV 60
MKTETVPPFQETPAGSSCHLNNLLSSRKLMAVGVLLGWLLVIHLLVNVWLLCLLSALLVV
Sbjct: 1 MKTETVPPFQETPAGSSCHLNNLLSSRKLMAVGVLLGWLLVIHLLVNVWLLCLLSALLVV 60
Query: 61 LGGWLGSSLAGVASGRLHLERFIPLATCPPCPEAERQLEREINRTIQMIIRDFVLSWYRS 120
LGGWLGSSLAGVASGRLHLERFIPLATCPPCPEAERQLEREINRTIQMIIRDFVLSWYRS
Sbjct: 61 LGGWLGSSLAGVASGRLHLERFIPLATCPPCPEAERQLEREINRTIQMIIRDFVLSWYRS 120
Query: 121 VSQEPAFEEEMEAAMKGLVQELRRRMSVMDSHAVAQSVLTLCGCHLQSYIQAKEATAGKN 180
VSQEPAFEEEMEAAMKGLVQELRRRMSVMDSHAVAQSVLTLCGCHLQSYIQAKEATAGKN
Sbjct: 121 VSQEPAFEEEMEAAMKGLVQELRRRMSVMDSHAVAQSVLTLCGCHLQSYIQAKEATAGKN 180
Query: 181 GPVEPSHLWEAYCRATAPHPAVHSPSAEVTYTRGVVNLLLQGLVPKPHLETRTGRHVVVE 240
GPVEPSHLWEAYCRATAPHPAVHSPSAEVTYTRGVVNLLLQGLVPKPHLETRTGRHVVVE
Sbjct: 181 GPVEPSHLWEAYCRATAPHPAVHSPSAEVTYTRGVVNLLLQGLVPKPHLETRTGRHVVVE 240
Query: 241 LITCNVILPLISRLSDPDWIHLVLVGIFSKARDPAPCPASAPEQPSVPTSLPLIAEVEQL 300
LITCNVILPLISRLSDPDWIHLVLVGIFSKARDPAPCPASAPEQPSVPTSLPLIAEVEQL
Sbjct: 241 LITCNVILPLISRLSDPDWIHLVLVGIFSKARDPAPCPASAPEQPSVPTSLPLIAEVEQL 300
Query: 301 PEGRASPVAAPVFLSYSEPEGSAGPSPEVEEGHEAVEGDLGGMCEERKVGNNSSHFLQPN 360
PEGRASPVAAPVFLSYSEPEGSAGPSPEVEEGHEAVEGDLGGMCEERKVGNNSSHFLQPN
Sbjct: 301 PEGRASPVAAPVFLSYSEPEGSAGPSPEVEEGHEAVEGDLGGMCEERKVGNNSSHFLQPN 360
Query: 361 VRGPLFLCEDSELESPLSELGKETIMLMTPGSFLSDRIQDALCALESSQALEPKDGEASE 420
VRGPLFLCEDSELESPLSELGKETIMLMTPGSFLSDRIQDALCALESSQALEPKDGEASE
Sbjct: 361 VRGPLFLCEDSELESPLSELGKETIMLMTPGSFLSDRIQDALCALESSQALEPKDGEASE 420
Query: 421 GAEAEEGPGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRP 480
GAEAEEGPGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRP
Sbjct: 421 GAEAEEGPGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRP 480
Query: 481 SCLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVIIQNLRITGTIT 540
SCLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVIIQNLRITGTIT
Sbjct: 481 SCLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVIIQNLRITGTIT 540
Query: 541 AREHSGTGFHPYTLYTVKYETALDGENSSGLQQLAYHTVNRRYREFLNLQTRLEEKPDLR 600
AREHSGTGFHPYTLYTVKYETALDGENSSGLQQLAYHTVNRRYREFLNLQTRLEEKPDLR
Sbjct: 541 AREHSGTGFHPYTLYTVKYETALDGENSSGLQQLAYHTVNRRYREFLNLQTRLEEKPDLR 600
Query: 601 KFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALNT 660
KFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALNT
Sbjct: 601 KFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALNT 660
Query: 661 DARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSEPQSPTEELSEAETESKPQTEGKKA 720
DARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSEPQSPTEELSEAETESKPQTEGKKA
Sbjct: 661 DARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSEPQSPTEELSEAETESKPQTEGKKA 720
Query: 721 SKSRLRFSSSKISPALSVTEAQDKILYCLQEGNVESETLSMSAMESFIEKQTKLLEMQPT 780
SKSRLRFSSSKISPALSVTEAQDKILYCLQEGNVESETLSMSAMESFIEKQTKLLEMQPT
Sbjct: 721 SKSRLRFSSSKISPALSVTEAQDKILYCLQEGNVESETLSMSAMESFIEKQTKLLEMQPT 780
Query: 781 KAPEKDPEQPPKGRVDSCVSDAAVPAQDPSNSDPGTETELADTALDLLLLLLTEQWKWLC 840
KAPEKDPEQPPKGRVDSCVSDAAVPAQDPSNSDPGTETELADTALDLLLLLLTEQWKWLC
Sbjct: 781 KAPEKDPEQPPKGRVDSCVSDAAVPAQDPSNSDPGTETELADTALDLLLLLLTEQWKWLC 840
Query: 841 TENMQKFLRLIFGTLVQRWLEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKFPRPVRTQ 900
TENMQKFLRLIFGTLVQRWLEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKFPRPVRTQ
Sbjct: 841 TENMQKFLRLIFGTLVQRWLEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKFPRPVRTQ 900
Query: 901 EQKLAAEKQALQSLMGVLPDLVVEILGVNKCRLSWGLVLESLQQPLINRHLIYCLGDIIL 960
EQKLAAEKQALQSLMGVLPDLVVEILGVNKCRLSWGLVLESLQQPLINRHLIYCLGDIIL
Sbjct: 901 EQKLAAEKQALQSLMGVLPDLVVEILGVNKCRLSWGLVLESLQQPLINRHLIYCLGDIIL 960
Query: 961 EFLDLSASVEESAATTSASDTPGNSKRMGVSS 992
EFLDLSASVEESAATTSASDTPGNSKRMGVSS
Sbjct: 961 EFLDLSASVEESAATTSASDTPGNSKRMGVSS 992
>gi|24797145 sorting nexin 14 isoform a [Homo sapiens]
Length = 946
Score = 68.9 bits (167), Expect = 2e-11
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 10/194 (5%)
Query: 97 QLEREINRTIQMIIRDFVLSWYRSVSQEPAFEEEMEAAMKGLVQELRRRMSVMDSHAV-A 155
+++ ++ +++++ +FV WYR V+ + +F +E+ ++ L RR+ +D ++
Sbjct: 132 KVDASLSEVLELVLENFVYPWYRDVTDDESFVDELRITLRFFASVLIRRIHKVDIPSIIT 191
Query: 156 QSVLTLCGCHLQSYIQAKEATAGKNGPVEPSHLWEAYCRATAPHPAVHSPSAEVTYTRGV 215
+ +L H++ ++A++ KN E Y H A+ S E+ Y R +
Sbjct: 192 KKLLKAAMKHIEVIVKARQKV--KNTEFLQQAALEEY--GPELHVALRSRRDELHYLRKL 247
Query: 216 VNLLLQGLVPKPHLETRTGRHVVVELITCNVILPLISRLSDPDWI-HLVLVGIFSKARDP 274
LL ++P + R+ ++ E+++ +V LP + L+DPD + HL+++ I D
Sbjct: 248 TELLFPYILPPKATDCRSLTLLIREILSGSVFLPSLDFLADPDTVNHLLIIFI----DDS 303
Query: 275 APCPASAPEQPSVP 288
P A+ P P VP
Sbjct: 304 PPEKATEPASPLVP 317
Score = 55.1 bits (131), Expect = 3e-07
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 859 WLEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKFPRPVRTQEQKLAAEKQALQSLMGVL 918
+L+ ++ L R V + LL+++I+ P R+ + K KQ + +M +
Sbjct: 830 YLQCKLEQLFQEHRLVSLITLLRDAIFCENTEP------RSLQDKQKGAKQTFEEMMNYI 883
Query: 919 PDLVVEILGVNKCRLSWGLVLESLQQPLINRHLIYCLGDIILE--FLDLSASVEESAATT 976
PDL+V+ +G S L+ + LQQP++N+ L Y L DI+++ F +L+ +E + T
Sbjct: 884 PDLLVKCIGEETKYESIRLLFDGLQQPVLNKQLTYVLLDIVIQELFPELNKVQKEVTSVT 943
Query: 977 S 977
S
Sbjct: 944 S 944
Score = 37.4 bits (85), Expect = 0.070
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 26/156 (16%)
Query: 578 TVNRRYREFLNLQTRLEEK----PDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLL 633
+V RRY EF L+++L E PD + K + GPK + +++++
Sbjct: 612 SVYRRYLEFYVLESKLTEFHGAFPDAQLPSKRIIGPKNY-----------EFLKSKREEF 660
Query: 634 ESFLKQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFP 693
+ +L++L PE++NS+ + +FL+ N F+ K + K++ S +K
Sbjct: 661 QEYLQKLLQHPELSNSQLLADFLSPN-GGETQFLDKILPDVNLGKIIKSVPGKLMKEKGQ 719
Query: 694 RSEP---------QSPTEELSEAE-TESKPQTEGKK 719
EP +SP + S E T P +E K
Sbjct: 720 HLEPFIMNFINSCESPKPKPSRPELTILSPTSENNK 755
>gi|38708169 sorting nexin 25 [Homo sapiens]
Length = 840
Score = 63.2 bits (152), Expect = 1e-09
Identities = 37/148 (25%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 815 GTETELADTALDLL--LLLLTEQWKWLCTENMQKFLRLIFGTLVQRWLEVQVANLTSPQR 872
G + LA+ L+ + L +KW+ + +++ FG + + + V+ + S Q
Sbjct: 676 GRKDALAEPCFMLIGEIFELRGMFKWV-RRTLIALVQVTFGRTINKQIRDTVSWIFSEQM 734
Query: 873 WVQYLLLLQESIWPGGVLPKFPRPVRTQEQKLAAEKQALQSLMGVLPDLVVEILGVNKCR 932
V Y+ + +++ WP G L P +R++EQ +++A Q L+ +PD++ ++G R
Sbjct: 735 LVYYINIFRDAFWPNGKLAP-PTTIRSKEQSQETKQRAQQKLLENIPDMLQSLVGQQNAR 793
Query: 933 LSWGLVLESLQQPLINRHLIYCLGDIIL 960
+ +LQ+ N+HL+Y L +++L
Sbjct: 794 HGIIKIFNALQETRANKHLLYALMELLL 821
Score = 45.8 bits (107), Expect = 2e-04
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 98 LEREINRTIQMIIRDFVLSWYRSVSQEPA------FEEEMEAAMKGLVQELRRRMSVMDS 151
+++ + RD++LSWY ++S++ E+ E A ++L R+S +D
Sbjct: 1 MDKALKEVFDYSYRDYILSWYGNLSRDEGQLYHLLLEDFWEIA-----RQLHHRLSHVDV 55
Query: 152 HAVAQS--VLTLCGCHLQSYIQAKEATAGKNGPVEPSHLWEAYCRATAPHPAVHSPSAEV 209
V + V TL L + K A A P L H + + EV
Sbjct: 56 VKVVCNDVVRTL----LTHFCDLKAANARHEEQPRPFVL----------HACLRNSDDEV 101
Query: 210 TYTRGVVNLLLQGLVPKPHLETRTGRHVVVELITCNVILPLISRLSDPDWIHLVLV 265
+ + +L+ L+P +++ + R ++ E++T V+ P++ LS+PD+I+ +L+
Sbjct: 102 RFLQTCSRVLVFCLLPSKDVQSLSLRIMLAEILTTKVLKPVVELLSNPDYINQMLL 157
Score = 40.8 bits (94), Expect = 0.006
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 578 TVNRRYREFLNLQTRLEE-KPDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESF 636
TV RR EF NL +L E P L+K V+ P LPF ++D +E K+ L F
Sbjct: 548 TVPRRLSEFQNLHRKLSECVPSLKK----VQLPS--LSKLPFKSIDQKFMEKSKNQLNKF 601
Query: 637 LKQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSE 696
L+ L + + SE + FL+ + D ++K + + + +S+ ++ L F S
Sbjct: 602 LQNLLSDERLCQSEALYAFLSPSPD----YLKVIDVQGKKNSFSLSSFLERLPRDF-FSH 656
Query: 697 PQSPTEELSE 706
+ TEE S+
Sbjct: 657 QEEETEEDSD 666
>gi|17864088 sorting nexin 13 [Homo sapiens]
Length = 957
Score = 62.4 bits (150), Expect = 2e-09
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 42/246 (17%)
Query: 57 LLVVLGGWLGSSLAGVASGRLHLER----FIPLATCPPCPEAERQLERE----------- 101
L V GG + + L G + +LE+ F+P T P P+ +++RE
Sbjct: 37 LCFVGGGLVVTLLFGKTNSEKYLEQCEHSFLP-PTSPGVPKCLEEMKREARTIKIDRRLT 95
Query: 102 --------INRTIQMIIRDFVLSWYRSVSQEPAFEEEMEAAMKGLVQELRRRMSVMDSHA 153
+ + IQ +RD+V WY ++S + +F E+ ++ + + R +D
Sbjct: 96 GANIIDEPLQQVIQFSLRDYVQYWYYTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQP 155
Query: 154 VAQS-VLTLCGCHLQSYIQAKEATAGKNGPVEPS-------------HLWEAYCRATAPH 199
+ ++ G HL+ + +A++ K+ V+ + + + CR
Sbjct: 156 YFTTRIVDDFGTHLRVFRKAQQKITEKDDQVKGTAEDLVDTFFEVEVEMEKEVCRDLV-- 213
Query: 200 PAVHSPSAEVTYTRGVVNLLLQGLVPKPHLETRTGRHVVVELITCNVILPLISRLSDPDW 259
SP E + R + +LL L+P + + R+ V E++ ++LPLI++LSDPD+
Sbjct: 214 --CTSPKDEEGFLRDLCEVLLYLLLPPGDFQNKIMRYFVREILARGILLPLINQLSDPDY 271
Query: 260 IHLVLV 265
I+ ++
Sbjct: 272 INQYVI 277
Score = 58.5 bits (140), Expect = 3e-08
Identities = 96/464 (20%), Positives = 165/464 (35%), Gaps = 93/464 (20%)
Query: 510 PLSSATFSFEPLSSPDGPVIIQ-NLRITGTITAREHSGTGFHPYTLYTVKYETALDGENS 568
P S S + LS+ +Q + I+ T +H T Y LY + +
Sbjct: 539 PTGSINLSLDDLSNVSSDDSVQLHAYISDTGVCNDHGKT----YALYAITV-------HR 587
Query: 569 SGLQQLAYHTVNRRYREFLNLQTRLEEKPDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEA 628
L RRY +F + R+ E+ + I + G K F NMD D +E
Sbjct: 588 RNLNSEEMWKTYRRYSDFHDFHMRITEQFESLSSILKLPGKKT------FNNMDRDFLEK 641
Query: 629 RKSLLESFLKQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFMVSRIDKMVVSAIVDTL 688
RK L ++L QL PE+ + +A F+
Sbjct: 642 RKKDLNAYL-QLLLAPEM-----------MKASPALAHYVYDFL---------------- 673
Query: 689 KTAFPRSEPQSPTEELSEAETESKPQTEGKKASKSRLRFSSSKISPALSVTEAQDKILYC 748
E+K ++GK ++ + ++P + +
Sbjct: 674 ---------------------ENKAYSKGKGDFARKM---DTFVNPLRNSMRNVSNAVKS 709
Query: 749 LQEGNVESETLSMSAMESFIEKQTKLLEMQPTKAPEKDPEQPPKGRVDSCVSDAAVPAQD 808
L + E T M E+ + ++ K P P + DS V AQ
Sbjct: 710 LPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLIP------KTDSDPEHRRVSAQL 763
Query: 809 PSNSDPGTETELADTALDLLLLLLTE--------QWKWLCTEN-MQKFLRLIFGTLVQRW 859
N D + L ++LLL+ E QW +N +Q+ +R +G + R
Sbjct: 764 DDNVDD-------NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRK 816
Query: 860 LEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKFPRPVRTQEQKLAAEKQALQSLMGVLP 919
+ V +TSP++ + +++ WP G+L + P R + ++ L+ ++P
Sbjct: 817 IVDHVDWMTSPEQVADSVKRFRDAFWPNGILAE-AVPCRDKSIRMRTRVAGKTKLLAIMP 875
Query: 920 DLVVEILGVNKCRLSWGLVLESLQQPLINRHLIYCLGDIILEFL 963
D + I+G R V E Q +NR ++Y + LE L
Sbjct: 876 DELKHIIGAETTRKGILRVFEMFQHNQLNRRMVYVFLEGFLETL 919
>gi|24797143 sorting nexin 14 isoform b [Homo sapiens]
Length = 893
Score = 55.1 bits (131), Expect = 3e-07
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 859 WLEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKFPRPVRTQEQKLAAEKQALQSLMGVL 918
+L+ ++ L R V + LL+++I+ P R+ + K KQ + +M +
Sbjct: 777 YLQCKLEQLFQEHRLVSLITLLRDAIFCENTEP------RSLQDKQKGAKQTFEEMMNYI 830
Query: 919 PDLVVEILGVNKCRLSWGLVLESLQQPLINRHLIYCLGDIILE--FLDLSASVEESAATT 976
PDL+V+ +G S L+ + LQQP++N+ L Y L DI+++ F +L+ +E + T
Sbjct: 831 PDLLVKCIGEETKYESIRLLFDGLQQPVLNKQLTYVLLDIVIQELFPELNKVQKEVTSVT 890
Query: 977 S 977
S
Sbjct: 891 S 891
Score = 43.1 bits (100), Expect = 0.001
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 199 HPAVHSPSAEVTYTRGVVNLLLQGLVPKPHLETRTGRHVVVELITCNVILPLISRLSDPD 258
H A+ S E+ Y R + LL ++P + R+ ++ E+++ +V LP + L+DPD
Sbjct: 187 HVALRSRRDELHYLRKLTELLFPYILPPKATDCRSLTLLIREILSGSVFLPSLDFLADPD 246
Query: 259 WI-HLVLVGIFSKARDPAPCPASAPEQPSVP 288
+ HL+++ I D P A+ P P VP
Sbjct: 247 TVNHLLIIFI----DDSPPEKATEPASPLVP 273
Score = 37.4 bits (85), Expect = 0.070
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 26/156 (16%)
Query: 578 TVNRRYREFLNLQTRLEEK----PDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLL 633
+V RRY EF L+++L E PD + K + GPK + +++++
Sbjct: 559 SVYRRYLEFYVLESKLTEFHGAFPDAQLPSKRIIGPKNY-----------EFLKSKREEF 607
Query: 634 ESFLKQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFP 693
+ +L++L PE++NS+ + +FL+ N F+ K + K++ S +K
Sbjct: 608 QEYLQKLLQHPELSNSQLLADFLSPN-GGETQFLDKILPDVNLGKIIKSVPGKLMKEKGQ 666
Query: 694 RSEP---------QSPTEELSEAE-TESKPQTEGKK 719
EP +SP + S E T P +E K
Sbjct: 667 HLEPFIMNFINSCESPKPKPSRPELTILSPTSENNK 702
>gi|23111036 sorting nexin 1 isoform c [Homo sapiens]
Length = 474
Score = 53.1 bits (126), Expect = 1e-06
Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 45/268 (16%)
Query: 411 LEPKDGEASEGAEAEEGP----GTETETGLPVSTLNSCPEIH-----IDTADKEI----- 456
LEP+ A+ G+E E G G + TG V + + P+I I+ KE
Sbjct: 21 LEPESEGAAGGSEPEAGDSDTEGEDIFTGAAVVSKHQSPKITTSLLPINNGSKENGIHEE 80
Query: 457 ---EQGDVTASVTALLEGPEKTCPSRPSCLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSS 513
E D+ A T E + S + +K L + SL P +SS P P
Sbjct: 81 QDQEPQDLFADATV-----ELSLDSTQNNQKKVLAKTLISLPPQ---EATNSSKPQP--- 129
Query: 514 ATFSFEPLSSPDGPVIIQNLRITGTITAREHSGTGFHPYTLYTVKYETALDGENSSGLQQ 573
++E L + +T IT E G G + Y Y V +T+L L +
Sbjct: 130 ---TYEELEEEEQE---DQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLP------LFR 177
Query: 574 LAYHTVNRRYREFLNLQTRLEEKPDLRKFIKNVKGPKKL--FPDLPFGNMDS---DRVEA 628
V RR+ +FL L +L EK FI K L + G DS + +E
Sbjct: 178 SKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEK 237
Query: 629 RKSLLESFLKQLCAIPEIANSEEVQEFL 656
R++ LE +L+++ P + +V+EFL
Sbjct: 238 RRAALERYLQRIVNHPTMLQDPDVREFL 265
>gi|23111034 sorting nexin 1 isoform a [Homo sapiens]
Length = 522
Score = 53.1 bits (126), Expect = 1e-06
Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 45/268 (16%)
Query: 411 LEPKDGEASEGAEAEEGP----GTETETGLPVSTLNSCPEIH-----IDTADKEI----- 456
LEP+ A+ G+E E G G + TG V + + P+I I+ KE
Sbjct: 21 LEPESEGAAGGSEPEAGDSDTEGEDIFTGAAVVSKHQSPKITTSLLPINNGSKENGIHEE 80
Query: 457 ---EQGDVTASVTALLEGPEKTCPSRPSCLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSS 513
E D+ A T E + S + +K L + SL P +SS P P
Sbjct: 81 QDQEPQDLFADATV-----ELSLDSTQNNQKKVLAKTLISLPPQ---EATNSSKPQP--- 129
Query: 514 ATFSFEPLSSPDGPVIIQNLRITGTITAREHSGTGFHPYTLYTVKYETALDGENSSGLQQ 573
++E L + +T IT E G G + Y Y V +T+L L +
Sbjct: 130 ---TYEELEEEEQE---DQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLP------LFR 177
Query: 574 LAYHTVNRRYREFLNLQTRLEEKPDLRKFIKNVKGPKKL--FPDLPFGNMDS---DRVEA 628
V RR+ +FL L +L EK FI K L + G DS + +E
Sbjct: 178 SKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEK 237
Query: 629 RKSLLESFLKQLCAIPEIANSEEVQEFL 656
R++ LE +L+++ P + +V+EFL
Sbjct: 238 RRAALERYLQRIVNHPTMLQDPDVREFL 265
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 50.4 bits (119), Expect = 8e-06
Identities = 80/305 (26%), Positives = 113/305 (37%), Gaps = 43/305 (14%)
Query: 262 LVLVGIFSKARDPAPCPASAPEQPSVPTSLPLIAEVEQLPEGRASPVAAPVFLSYSEPEG 321
L L + S +++ AP P+ P P +LP E A +A+ + S S PE
Sbjct: 794 LPLPSVPSPSQEGAPLPSEEASAPDAPDALPDSPTPATGGEVSAIKLASALNGSSSSPEV 853
Query: 322 SAGPSPEVEEGHEAVEG-----DLGGMCEERKVGNNSSHFLQPNVRGPLFLCEDSELESP 376
A PS E E+ EA G G+ R + LQ V P L + ++ S
Sbjct: 854 EA-PSSEDEDTAEATSGIFTDTSSDGLQARRPDVVPAFRSLQKQVGTPDSL-DSLDIPSS 911
Query: 377 LSELGKETIMLMTPG-SFLSDRIQDALCALESSQALEPKDGEASEGAEAE---------E 426
S+ G E G S R D+ E+ ++ E EA EG E + E
Sbjct: 912 ASDGGYEVFSPSATGPSGGQPRALDSGYDTENYESPEFVLKEAQEGCEPQAFAELASEGE 971
Query: 427 GPGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTC---------- 476
GPG ET +S LN ++E A T+ GPEK C
Sbjct: 972 GPGPETRLSTSLSGLNEKNPYRDSAYFSDLE---AEAEATS---GPEKKCGGDRAPGPEL 1025
Query: 477 -------PSRPSCLEKDLTNDVSSLDP--TLPPVL-LSSSPPGPLSSATFSFEPLSSPDG 526
PS CL ++ + P LPP+L L S P P + + P G
Sbjct: 1026 GLPSTGQPSEQVCLRPGVSGEAQGSGPGEVLPPLLQLEGSSPEPSTCPSGLVPEPPEPQG 1085
Query: 527 PVIIQ 531
P ++
Sbjct: 1086 PAKVR 1090
>gi|23111038 sorting nexin 2 [Homo sapiens]
Length = 519
Score = 46.2 bits (108), Expect = 2e-04
Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 56/284 (19%)
Query: 415 DGEASEGAEAEEGPGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEK 474
DG+ ++ + E+G T T VSTL S P + D++A+ GP+
Sbjct: 12 DGKPTDFEDLEDGEDLFTST---VSTLESSPS---SPEPASLPAEDISANSN----GPKP 61
Query: 475 T---CPSRPSCLEKDLTNDVSSLDPTLPPVLLSSSPPG--PLSSATFSFEPLSSPD--GP 527
T L + T +VS P P+L S P P++ T + S P
Sbjct: 62 TEVVLDDDREDLFAEATEEVSLDSPEREPILSSEPSPAVTPVTPTTLIAPRIESKSMSAP 121
Query: 528 VIIQNLR-------------ITGTITAREHSGTGFHPYTLYTVKYETALDGENSSGLQQL 574
VI R I ++ E G G + Y Y V +T+L + S
Sbjct: 122 VIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEF--- 178
Query: 575 AYHTVNRRYREFLNLQTRLEEKPDLRKFI------KNVKGPKKLFPDLPFGNMDS---DR 625
+V RR+ +FL L ++L K +I K++ G K + G DS +
Sbjct: 179 ---SVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTK----VKVGKEDSSSTEF 231
Query: 626 VEARKSLLESFLKQLCAIPEIANSEEVQEFL-------ALNTDA 662
VE R++ LE +L++ P + ++++FL A+NT A
Sbjct: 232 VEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQA 275
>gi|23111032 sorting nexin 1 isoform b [Homo sapiens]
Length = 457
Score = 43.1 bits (100), Expect = 0.001
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 545 SGTGFHPYTLYTVKYETALDGENSSGLQQLAYHTVNRRYREFLNLQTRLEEKPDLRKFIK 604
+G G + Y Y V +T+L L + V RR+ +FL L +L EK FI
Sbjct: 90 AGDGMNAYVAYKVTTQTSLP------LFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIV 143
Query: 605 NVKGPKKL--FPDLPFGNMDS---DRVEARKSLLESFLKQLCAIPEIANSEEVQEFL 656
K L + G DS + +E R++ LE +L+++ P + +V+EFL
Sbjct: 144 PPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFL 200
>gi|23238244 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 42.0 bits (97), Expect = 0.003
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 579 VNRRYREFLNLQTRLEEK-PDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFL 637
V RRY +F L +L+E P R + PK+ F D N ++D +E R+ L++FL
Sbjct: 141 VFRRYTDFSRLNDKLKEMFPGFRLALP----PKRWFKD----NYNADFLEDRQLGLQAFL 192
Query: 638 KQLCAIPEIANSEEVQEFLALN 659
+ L A +IAN V+EFL L+
Sbjct: 193 QNLVAHKDIANCLAVREFLCLD 214
>gi|23238246 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 42.0 bits (97), Expect = 0.003
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 579 VNRRYREFLNLQTRLEEK-PDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFL 637
V RRY +F L +L+E P R + PK+ F D N ++D +E R+ L++FL
Sbjct: 141 VFRRYTDFSRLNDKLKEMFPGFRLALP----PKRWFKD----NYNADFLEDRQLGLQAFL 192
Query: 638 KQLCAIPEIANSEEVQEFLALN 659
+ L A +IAN V+EFL L+
Sbjct: 193 QNLVAHKDIANCLAVREFLCLD 214
>gi|23111055 sorting nexin 7 isoform b [Homo sapiens]
Length = 336
Score = 41.6 bits (96), Expect = 0.004
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 40/215 (18%)
Query: 490 DVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVIIQNLRITGTITAREHSGTGF 549
D++S P +P +SP ++ F EP +++L IT + E T
Sbjct: 2 DMNSFSPMMP-----TSPLSMINQIKFEDEP--------DLKDLFIT--VDEPESHVTTI 46
Query: 550 HPYTLYTVKYETALDGENSSGLQQLAYHTVNRRYREFLNLQTRLEE-------KPDLRKF 602
+ Y + +T+ +SS + V RRY++FL L+ +LEE P KF
Sbjct: 47 ETFITYRIITKTSRGEFDSSEFE------VRRRYQDFLWLKGKLEEAHPTLIIPPLPEKF 100
Query: 603 IKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALNTDA 662
I VKG + F D D +E R+ L FL ++ P + +E+ + FL
Sbjct: 101 I--VKGMVERFND--------DFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE 150
Query: 663 RIAFVKK-PFMVSRIDKMVVSAIVDTLKTAFPRSE 696
+ K+ P ++SR+ + V A+ +++ R E
Sbjct: 151 LSSHKKQGPGLLSRMGQ-TVRAVASSMRGVKNRPE 184
>gi|194294540 sorting nexin 7 isoform a [Homo sapiens]
Length = 451
Score = 41.6 bits (96), Expect = 0.004
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 40/215 (18%)
Query: 490 DVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVIIQNLRITGTITAREHSGTGF 549
D++S P +P +SP ++ F EP +++L IT + E T
Sbjct: 66 DMNSFSPMMP-----TSPLSMINQIKFEDEP--------DLKDLFIT--VDEPESHVTTI 110
Query: 550 HPYTLYTVKYETALDGENSSGLQQLAYHTVNRRYREFLNLQTRLEE-------KPDLRKF 602
+ Y + +T+ +SS + V RRY++FL L+ +LEE P KF
Sbjct: 111 ETFITYRIITKTSRGEFDSSEFE------VRRRYQDFLWLKGKLEEAHPTLIIPPLPEKF 164
Query: 603 IKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALNTDA 662
I VKG + F D D +E R+ L FL ++ P + +E+ + FL
Sbjct: 165 I--VKGMVERFND--------DFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE 214
Query: 663 RIAFVKK-PFMVSRIDKMVVSAIVDTLKTAFPRSE 696
+ K+ P ++SR+ + V A+ +++ R E
Sbjct: 215 LSSHKKQGPGLLSRMGQ-TVRAVASSMRGVKNRPE 248
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 38.9 bits (89), Expect = 0.024
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 285 PSVPTSLPLIAEVEQLPEGR---ASPVAAPVFLSYSEPEGSAGPSPEVEEGHEAVEG-DL 340
P + ++LP+ LP +SPV L ++ PE P++ H + E
Sbjct: 7109 PPISSTLPVTISSSPLPVTSLLTSSPVTTTDML-HTSPELVTSSPPKLS--HTSDERLTT 7165
Query: 341 GGMCEERKVGNNSSHFLQPNVRGPLFLCEDSELESPLSELGKETIMLMTPGSFLSDRIQD 400
G + + S++ NV P S ESP S L T F++ +D
Sbjct: 7166 GKDTTNTEAVHPSTNTAASNVEIP-----SSGHESPSSALADSETSKATSPMFITSTQED 7220
Query: 401 ALCALESSQALEP----KDGEASEGAEAEEGPGTETETGLPVSTLNSCPEIHIDTADKEI 456
A+ + LE K+ +S + E G+ ET + T E+ I A EI
Sbjct: 7221 TTVAISTPHFLETSRIQKESISSLSPKLRE-TGSSVETSSAIETSAVLSEVSIG-ATTEI 7278
Query: 457 EQGDVTASVTALLEGP-EKTCPSRPSCLEKDLTNDVSSL--DPTLPPVLLSSSPPGPLSS 513
+ +VT+S + G E T S K + S + + + + +SPPG S
Sbjct: 7279 SRTEVTSSSRTSISGSAESTMLPEISTTRKIIKFPTSPILAESSEMTIKTQTSPPGSTSE 7338
Query: 514 ATFSFEPLSSP 524
+TF+ + ++P
Sbjct: 7339 STFTLDTSTTP 7349
Score = 33.5 bits (75), Expect = 1.0
Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 27/160 (16%)
Query: 369 EDSELESP---LSELGKETIMLMTPGSFLSDRIQDALCALESSQALEPKDGEASEGAEAE 425
E S++ SP S + TI P S + R + E++ +L PK E S E
Sbjct: 4853 EPSKVTSPNVTTSTMEDTTISRSIPKSSKTTRTET-----ETTSSLTPKLRETSISQEIT 4907
Query: 426 EGPGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPSCLEK 485
TET T P + A E+ + DVT+S + GP+++ S E
Sbjct: 4908 SS--TETST---------VPYKELTGATTEVSRTDVTSSSSTSFPGPDQSTVSLDISTE- 4955
Query: 486 DLTNDVSSLDPTLP-----PVLLSSSPPGPLSSATFSFEP 520
TN S P + + + P G S TF+ +P
Sbjct: 4956 --TNTRLSTSPIMTESAEITITTQTGPHGATSQDTFTMDP 4993
Score = 30.4 bits (67), Expect = 8.6
Identities = 41/186 (22%), Positives = 67/186 (36%), Gaps = 25/186 (13%)
Query: 416 GEASEGAEAEEGPGTETETGLPVSTLN----SCPEIHIDTADKEIEQGDVTASVTALLEG 471
G +++ A PGTET T +P STL+ + ++ E +T +V+ + G
Sbjct: 11842 GVSAKTAPLSTHPGTETSTMIPTSTLSLGLLETTGLLATSSSAETSTSTLTLTVSPAVSG 11901
Query: 472 PEKTCPSRPSCLEKDLTNDVSSLDPTLPPVLLSSSPP---GPLSSATFSFEPLSSPDGP- 527
+ + D V+S + P + S PP ++ T + P P P
Sbjct: 11902 LSS------ASITTDKPQTVTSWNTETSPSVTSVGPPEFSRTVTGTTMTLIPSEMPTPPK 11955
Query: 528 ------VIIQNLRITGTITAREHSGTGFHPYTLYTVKYETALDGE-----NSSGLQQLAY 576
V + T + A + TG P T L G + G+ LA
Sbjct: 11956 TSHGEGVSPTTILRTTMVEATNLATTGSSPTVAKTTTTFNTLAGSLFTPLTTPGMSTLAS 12015
Query: 577 HTVNRR 582
+V R
Sbjct: 12016 ESVTSR 12021
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 38.9 bits (89), Expect = 0.024
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 422 AEAEEGPGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPS 481
AE+ P T+ ++ + T P I + TAD I VTA+ ++ P P
Sbjct: 663 AESPAIPVTQADSPVVPVTSADRPVIPVTTADGRIVP--VTAAGDPIVPVTPADTPGSPV 720
Query: 482 CLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVI 529
V+S D PV P P++SA P+SS DGPV+
Sbjct: 721 TSADGPVVPVTSADSPFVPVTPPDGPVVPVTSADGPVAPVSSADGPVV 768
Score = 37.7 bits (86), Expect = 0.054
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 436 LPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPSCLEKDLTNDVSSLD 495
+PV++ +S P I + TAD + VTA+ ++ P P V+S D
Sbjct: 418 VPVTSADS-PLIPVTTADGRVVP--VTAAGDPIVPVTPADTPGSPVTSADGPVVPVTSAD 474
Query: 496 PTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVI 529
L PV P P++SA P+SS DGPV+
Sbjct: 475 IPLVPVTPPDGPVVPVTSADGPVAPVSSADGPVV 508
Score = 36.6 bits (83), Expect = 0.12
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Query: 422 AEAEEGPGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPS 481
AE+ P T+ ++ + T P + TAD I VTA+ ++ P P
Sbjct: 1004 AESPAIPVTQADSPVVPVTSADRPVSPVTTADGRIVP--VTAAGDPIVPVTPADTPGSPV 1061
Query: 482 CLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVI 529
V+S D PV P P++SA P+SS DGPV+
Sbjct: 1062 TSADGPVVPVTSADSPFVPVTPPDGPVVPVTSADGPVAPVSSADGPVV 1109
Score = 34.3 bits (77), Expect = 0.60
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 8/124 (6%)
Query: 410 ALEPKDGEASEGAEAEEG--PGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTA 467
++ P DG A A+ P T + + T P I + AD + VT++
Sbjct: 970 SVTPADGPVVPVASADSPFVPVTPADDPIVSVTPAESPAIPVTQADSPVVP--VTSADRP 1027
Query: 468 LLEGPEKTCPSR--PSCLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPD 525
+ P T R P D V+ D PV + P P++SA F P++ PD
Sbjct: 1028 V--SPVTTADGRIVPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTSADSPFVPVTPPD 1085
Query: 526 GPVI 529
GPV+
Sbjct: 1086 GPVV 1089
Score = 33.5 bits (75), Expect = 1.0
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 436 LPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPSCLEKDLTNDVSSLD 495
+PV+ +S P + + +AD + S + + P P V+S D
Sbjct: 1686 VPVTPADS-PVVLVTSADSPVIPVTPADSPVVPVTSADTDSPGSPVTSADGPVVPVTSAD 1744
Query: 496 PTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVI 529
PV + P P++SA P+SS DGPV+
Sbjct: 1745 SLPVPVTPADGPVVPVTSADGPVAPVSSADGPVV 1778
Score = 32.3 bits (72), Expect = 2.3
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 491 VSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVI 529
V+S D + PV + P P++SA P+SS DGPV+
Sbjct: 1091 VTSADGPVAPVSSADGPVVPVTSADGPVAPVSSADGPVV 1129
Score = 31.6 bits (70), Expect = 3.9
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 436 LPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPSCLEKDLTNDVSSLD 495
+PV+ +S P I + TAD I VT + + +L P+ P V+ D
Sbjct: 508 VPVTPADS-PFIPVTTADDLIVP--VTPADSPVLSVTPAESPAIP----------VTPAD 554
Query: 496 PTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVI 529
+ PV ++ P P++SA F P+ DGPV+
Sbjct: 555 SPIVPVTPANGPVVPVTSADSPFVPVIPADGPVV 588
Score = 31.2 bits (69), Expect = 5.0
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Query: 422 AEAEEGPGTETETGLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPS 481
AE+ P T ++ + T P I + TA + VT + ++ P P
Sbjct: 1362 AESPAIPVTPADSPVVPVTSADSPLIPLTTAGSRVVP--VTPTGDPIVPVTPADTPGSPV 1419
Query: 482 CLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVI 529
V+ + PV + +P P++SA P+++PDGP++
Sbjct: 1420 TSADGPVVPVTPAGDPIVPVTPADTPGSPVTSADGPVVPVTTPDGPLV 1467
Score = 31.2 bits (69), Expect = 5.0
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 436 LPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPSCLEKDLTNDVSSLD 495
+PV+ +S P + + +AD + VT++ +GP S S L V+ D
Sbjct: 1706 IPVTPADS-PVVPVTSADTDSPGSPVTSA-----DGPVVPVTSADS-----LPVPVTPAD 1754
Query: 496 PTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVI 529
+ PV + P P+SSA P++ D PV+
Sbjct: 1755 GPVVPVTSADGPVAPVSSADGPVVPVTPADSPVV 1788
Score = 31.2 bits (69), Expect = 5.0
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 428 PGTETET-GLPVSTLNSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPSCLEKD 486
P T E+ +PV+ +S P + + +AD + + + P P D
Sbjct: 1998 PVTPAESPAIPVTPTDS-PVVPVTSADSPVIPVTADSPFVPVTPADSPVIPVTPP---DD 2053
Query: 487 LTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVI 529
L V+ +D + PV L P ++ A +P++ DGPV+
Sbjct: 2054 LVVPVTPIDCPVVPVTLVDCPVVSVTPANSPVDPVTPADGPVV 2096
Score = 30.4 bits (67), Expect = 8.6
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 10/111 (9%)
Query: 422 AEAEEGPGTETETGLPVSTLNSCPEIHIDTADKEI----EQGDVTASVTALLEGPEKTCP 477
AE+ P T ++ + T P + + AD I D VT P T P
Sbjct: 2181 AESPAIPVTPADSPVVPVTPADDPVVPVTPADSPIVPVPPASDPVVPVT-----PADT-P 2234
Query: 478 SRPSCLEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPV 528
P V+S D L PV SP P++ A P++S DGPV
Sbjct: 2235 GSPVASADGPVVPVTSADSPLVPVTPGDSPVVPVTPADSPVFPVTSADGPV 2285
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 38.9 bits (89), Expect = 0.024
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 695 SEPQSPTEELSEAETESKPQTEGKKASKSR--LRFSSSKISPALSVTEAQDKILYCLQEG 752
++P++ + E E E E +P++EG +A ++ + + + P V E+Q+ E
Sbjct: 1915 AQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQE------AEE 1968
Query: 753 NVESETLSMSAMESFIEKQTKLLEMQPTKAPEKDPEQPPKGRVDSCVSDAAVPAQDPSNS 812
+ E+ + A+E +E Q E QP + PE +G + + A P D +
Sbjct: 1969 EAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPE--AEGEMQE-AEEEAQPESDGVEA 2025
Query: 813 DPGTETELA 821
P +E E A
Sbjct: 2026 QPKSEGEEA 2034
Score = 35.0 bits (79), Expect = 0.35
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 695 SEPQSPTEELSEAETESKPQTEGKKASKSRLRFSSSKISPALSVTEAQDKILYCLQ---- 750
++P+S E EAE E++P++EG +A + + S + EA+++ L+
Sbjct: 2125 AQPESEGIEAPEAEGEAQPESEGVEAQDA--EGEAQPESEGIEAQEAEEEAQPELEGVEA 2182
Query: 751 ---EGNVESETLSMSAMESFIEKQTKLLEMQPTKAPEKDPEQPPK 792
EG + E+ + A E+ E Q E++ +APE + E P+
Sbjct: 2183 PEAEGEAQPESEGIEAPEAEGEAQP---ELEGVEAPEAEEEAQPE 2224
Score = 31.2 bits (69), Expect = 5.0
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 695 SEPQSPTEELSEAETESKPQTEGKKASKSRLRFSSSKISPALSVTEAQDKILYCLQEGNV 754
++P+S E EAE E++P+ EG +A + + + P EA + EG
Sbjct: 2157 AQPESEGIEAQEAEEEAQPELEGVEAPE-----AEGEAQPESEGIEAPE------AEGEA 2205
Query: 755 ESETLSMSAMESFIEKQTKLLEMQPTKAPEKDPEQPPK 792
+ E + A E+ E Q E + + PE + E P+
Sbjct: 2206 QPELEGVEAPEAEEEAQP---EPEGVETPEAEGEAQPE 2240
Score = 30.8 bits (68), Expect = 6.6
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 694 RSEPQSPTEELSEAETESKPQTEGKKASKSRLRFSSSK-----ISPALSVTEAQDKILYC 748
+++P+S E EAE E++P++E +A + + ++ S + EA+ ++
Sbjct: 1953 QTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEA 2012
Query: 749 LQEGNVESETLSMSAMESFIEKQTKLLEMQPTKA---PEKDPEQPPKGRVDSCVSDAAV 804
+E ES+ + E Q E Q T+ PE D + P+ ++ ++ V
Sbjct: 2013 EEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEV 2071
Score = 30.4 bits (67), Expect = 8.6
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 15/124 (12%)
Query: 305 ASPVAAPVFLSYSEPEGSAGPSPEVEEGHEAVEGDLGGMCEERKVGNNSSHFLQPNVRGP 364
A + AP ++PE +PE E + EG+ E+ + QP
Sbjct: 1832 AEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGE-AQP----- 1885
Query: 365 LFLCEDSELESPLSELGKETIMLMTPGSFLSDRIQDALCALESSQALEP--KDGEASEGA 422
E ++E+P +E + + G+ + ++A ES +ALE +D SEGA
Sbjct: 1886 ----ESEDVETPEAEW---EVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGA 1938
Query: 423 EAEE 426
EA+E
Sbjct: 1939 EAQE 1942
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 38.5 bits (88), Expect = 0.032
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 34/225 (15%)
Query: 306 SPVAAPVFLSYSEPEGSAGPSPEVEEGHEAVEGDLGGMCEERKVGNNSSHFLQPNVRGPL 365
SP++A VF P+ P P + + C+E N++ +
Sbjct: 1255 SPLSATVF-----PKVEHSPGPPLADAE----------CQEGLSENSACRWTVVKTE--- 1296
Query: 366 FLCEDSELESPLSELGKETIMLMTPGSFLSDRIQDALCALESSQALEPKDGEASEGA--E 423
E + PL + +E++ TPG + + +E +A E G +
Sbjct: 1297 ---EGRQALEPLPQGIQESLNNPTPGDL------EEIVKMEPEEAREEISGSPERDICDD 1347
Query: 424 AEEGPGTETETGLPVSTLNSCPEIHIDTA-DKEIEQGDVTASVTALLEGPEKTCPSRPSC 482
+ E +TG P L+S E+ T KE E+ T + ++ E P++ S
Sbjct: 1348 IKVEHAVELDTGAPSEELSSAGEVTKQTVLQKEEERSQPTKTPSSSQEPPDEGT-SGTDV 1406
Query: 483 LEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGP 527
+ N +SS+DP V LSS P P S++ + + +P GP
Sbjct: 1407 NKGSSKNALSSMDPE---VRLSSPPGKPEDSSSVDGQSVGTPVGP 1448
>gi|82830428 gon-4-like isoform b [Homo sapiens]
Length = 1529
Score = 38.5 bits (88), Expect = 0.032
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 34/225 (15%)
Query: 306 SPVAAPVFLSYSEPEGSAGPSPEVEEGHEAVEGDLGGMCEERKVGNNSSHFLQPNVRGPL 365
SP++A VF P+ P P + + C+E N++ +
Sbjct: 1255 SPLSATVF-----PKVEHSPGPPLADAE----------CQEGLSENSACRWTVVKTE--- 1296
Query: 366 FLCEDSELESPLSELGKETIMLMTPGSFLSDRIQDALCALESSQALEPKDGEASEGA--E 423
E + PL + +E++ TPG + + +E +A E G +
Sbjct: 1297 ---EGRQALEPLPQGIQESLNNPTPGDL------EEIVKMEPEEAREEISGSPERDICDD 1347
Query: 424 AEEGPGTETETGLPVSTLNSCPEIHIDTA-DKEIEQGDVTASVTALLEGPEKTCPSRPSC 482
+ E +TG P L+S E+ T KE E+ T + ++ E P++ S
Sbjct: 1348 IKVEHAVELDTGAPSEELSSAGEVTKQTVLQKEEERSQPTKTPSSSQEPPDEGT-SGTDV 1406
Query: 483 LEKDLTNDVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGP 527
+ N +SS+DP V LSS P P S++ + + +P GP
Sbjct: 1407 NKGSSKNALSSMDPE---VRLSSPPGKPEDSSSVDGQSVGTPVGP 1448
>gi|22547191 sorting nexin 15 isoform A [Homo sapiens]
Length = 342
Score = 38.1 bits (87), Expect = 0.041
Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 28/227 (12%)
Query: 581 RRYREFLNLQTRLEEKPDLRKFIKNVKGPKKLFPDLP----FGNMDSDRVEARKSLLESF 636
+RY +F L DL +N+ + FP P FG ++ +E R+ E
Sbjct: 50 KRYSDFRKLHG------DLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDL 103
Query: 637 LKQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSE 696
L+ IP + NS +++EF R V +P VSR ++ ++ T PR
Sbjct: 104 LRFTVHIPALNNSPQLKEFF------RGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLS 157
Query: 697 PQSPTEE--LSEAETESKPQTEGKKASKSRLRFSSSKI-----SPALS-VTEAQDKIL-- 746
P E L E E P L F+ SPA +TEA+ +
Sbjct: 158 QLLPAERRGLEELEVPVDPPPSSPAQEALDLLFNCESTEEASGSPARGPLTEAELALFDP 217
Query: 747 YCLQEGNVESETLSMSAMESFIEKQTKLLEMQPTKAPEKDPEQPPKG 793
+ +EG S T A + +E ++ L+ +P + ++ E+ +G
Sbjct: 218 FSKEEGAAPSPT--HVAELATMEVESARLDQEPWEPGGQEEEEDGEG 262
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 38.1 bits (87), Expect = 0.041
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 19/169 (11%)
Query: 260 IHLVLVGIFSKARDPAPCPASAPEQP---SVPTSLPLIAEVEQLP--EGRASPVAAPVFL 314
+HLV + KA+DPA AS+P P S P++ P P G AS A
Sbjct: 78 VHLV-IKTPQKAQDPAAATASSPSTPDPASAPSTTPASPATPAQPSTSGSASSDAG---- 132
Query: 315 SYSEPEGSAGPSPEVEEGHEAVEGDL----GGMCEERKVGNNSSHFLQPNVRGPLFLCED 370
S S GPSP EG + + GG+ +G S++F++ + L +
Sbjct: 133 SGSRRSSGGGPSPGAGEGSPSATASILSGFGGILGLGSLGLGSANFMELQQQMQRQLMSN 192
Query: 371 SELESPLSELGKETIMLMTPGSFLSDRIQDALCALESSQALEPKDGEAS 419
E+ S + E M+ P D ++ + A Q L ++ E S
Sbjct: 193 PEMLSQIMENPLVQDMMSNP-----DLMRHMIMANPQMQQLMERNPEIS 236
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 37.4 bits (85), Expect = 0.070
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 18/156 (11%)
Query: 274 PAPCPASAPEQPSVPTSLPLIAEVEQLPEGRASPVAAPVFLSYSEPEGSAGPSPEVEEGH 333
P P + AP Q TSL A++EQ +A+PV S P ++ P V G+
Sbjct: 3133 PVPADSRAPLQKPRQTSL---ADLEQKVPTNYEVIASPVVPMSSAPSETSYSGPAVSSGY 3189
Query: 334 EAVEGDLGGMCEERKVGNNSSHFLQPNVRGPLFLCEDSELESPLSELGKETIMLMTPGSF 393
E G + E + G+ S P P DS S + + +M+
Sbjct: 3190 EQ-----GKVPEVPRAGDRGSVSQSPAPTYP----SDSHYTSLEQNVPRNYVMI----DD 3236
Query: 394 LSDRIQDALCALESSQALEPKDGEASEGAEAEEGPG 429
+S+ +D+ SQ LEP G S G +E PG
Sbjct: 3237 ISELTKDSTSTAPDSQRLEPL-GPGSSGRPGKE-PG 3270
Score = 31.6 bits (70), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 274 PAPCPAS-APEQPSVPTSLPLIAEVEQLPEGRASP 307
P+P PAS P P PT P++A+ Q P ++P
Sbjct: 1509 PSPAPASDMPRSPGAPTPSPMVAQGTQTPHRPSTP 1543
>gi|31742501 sorting nexin family member 27 [Homo sapiens]
Length = 528
Score = 37.0 bits (84), Expect = 0.092
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 14/81 (17%)
Query: 580 NRRYREFLNLQTRLEEKPDLRKFIKNVKGPKKLFPDLPFG---NMDSDRVEARKSLLESF 636
++RYREF L L+ R+F FP LP ++ +++AR+ LE +
Sbjct: 194 SKRYREFAILHQNLK-----REFANFT------FPRLPGKWPFSLSEQQLDARRRGLEEY 242
Query: 637 LKQLCAIPEIANSEEVQEFLA 657
L+++C+I I S+ +QEFL+
Sbjct: 243 LEKVCSIRVIGESDIMQEFLS 263
>gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1
isoform a [Homo sapiens]
Length = 1066
Score = 37.0 bits (84), Expect = 0.092
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 550 HP--YTLYTVKYETALDGENSSGLQQLAYHTVNRRYREFLNLQTRLEEKPDLRKFIKNVK 607
HP YT+Y V + N +Q++ V +RY +F L +L + KN+
Sbjct: 23 HPRGYTVYKVTARV-VSRRNPEDVQEII---VWKRYSDFKKLHK------ELWQIHKNLF 72
Query: 608 GPKKLFPD----LPFGNMDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEF 655
+LFP + FG D +E R+ E L+ IP + NS+++++F
Sbjct: 73 RHSELFPPFAKGIVFGRFDETVIEERRQCAEDLLQFSANIPALYNSKQLEDF 124
>gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]
Length = 1193
Score = 36.6 bits (83), Expect = 0.12
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 581 RRYREFLNLQTRLEEKPDLRKFIKNVKGPKKLFPDLP---FGNMDSDRVEARKSLLESFL 637
+R + LN++T ++ D I+ + G KK P LP SD A ++E+F
Sbjct: 56 KRPKFHLNIRTLTDDMLDKFASIR-IPGSKKERPPLPNLKTAFASSDCSAAPLEMMENFP 114
Query: 638 KQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFMVSRIDKMVVSAIVDTLKT-AFPRSE 696
K L + E++ E + LN D + +K F + + +MV+ I KT + RS
Sbjct: 115 KPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKK--EMVMQYINTASKTGSLKRSR 172
Query: 697 PQSPTEELSEAETESKPQTEGKKASKSRLRFSSSKIS 733
SP E + E + S + R+ +S+ +S
Sbjct: 173 QISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVS 209
>gi|7706706 sorting nexin 9 [Homo sapiens]
Length = 595
Score = 36.6 bits (83), Expect = 0.12
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 578 TVNRRYREFLNLQTRLEEKPDLRKFIKNVKGPKKLFPDLPF-GNMDSDRVEARKSLLESF 636
+VN RY+ F L RL L KF + P PD G + + ++ R L+++
Sbjct: 282 SVNHRYKHFDWLYERL-----LVKFGSAIPIPS--LPDKQVTGRFEEEFIKMRMERLQAW 334
Query: 637 LKQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSE 696
+ ++C P I+ SE Q+FL + K+ + D++ I T+ E
Sbjct: 335 MTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRK---AERDELAGVMIFSTM-------E 384
Query: 697 PQSPTEELSEAETESKPQTEGK 718
P++P +L E E K + GK
Sbjct: 385 PEAP--DLDLVEIEQKCEAVGK 404
>gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [Homo
sapiens]
Length = 464
Score = 36.6 bits (83), Expect = 0.12
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 579 VNRRYREFLNLQTRLEEK-PDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFL 637
V RRY EF L L+++ P + I K++F D N D D ++ R++ L F+
Sbjct: 47 VFRRYAEFDKLYNTLKKQFPAMALKIP----AKRIFGD----NFDPDFIKQRRAGLNEFI 98
Query: 638 KQLCAIPEIANSEEVQEFLALNT 660
+ L PE+ N +V+ FL +++
Sbjct: 99 QNLVRYPELYNHPDVRAFLQMDS 121
>gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 36.6 bits (83), Expect = 0.12
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 579 VNRRYREFLNLQTRLEEK-PDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFL 637
V RRY EF L L+++ P + I K++F D N D D ++ R++ L F+
Sbjct: 47 VFRRYAEFDKLYNTLKKQFPAMALKIP----AKRIFGD----NFDPDFIKQRRAGLNEFI 98
Query: 638 KQLCAIPEIANSEEVQEFLALNT 660
+ L PE+ N +V+ FL +++
Sbjct: 99 QNLVRYPELYNHPDVRAFLQMDS 121
>gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 36.6 bits (83), Expect = 0.12
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 579 VNRRYREFLNLQTRLEEK-PDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFL 637
V RRY EF L L+++ P + I K++F D N D D ++ R++ L F+
Sbjct: 47 VFRRYAEFDKLYNTLKKQFPAMALKIP----AKRIFGD----NFDPDFIKQRRAGLNEFI 98
Query: 638 KQLCAIPEIANSEEVQEFLALNT 660
+ L PE+ N +V+ FL +++
Sbjct: 99 QNLVRYPELYNHPDVRAFLQMDS 121
>gi|4506321 protein tyrosine phosphatase, receptor type, N precursor
[Homo sapiens]
Length = 979
Score = 36.2 bits (82), Expect = 0.16
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 270 KARDPAPCPASAPEQPSVPTSLPLIAEVEQLPE-------GRASPVAAPVFLSYSEPEGS 322
+ RD A PA P PT+ P +EV+Q+P A P PV L P G
Sbjct: 394 EGRDTAELPARTSPMPGHPTASPTSSEVQQVPSPVSSEPPKAARPPVTPVLLEKKSPLGQ 453
Query: 323 AGPS 326
+ P+
Sbjct: 454 SQPT 457
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,217,658
Number of Sequences: 37866
Number of extensions: 2048629
Number of successful extensions: 8126
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 7552
Number of HSP's gapped (non-prelim): 728
length of query: 992
length of database: 18,247,518
effective HSP length: 112
effective length of query: 880
effective length of database: 14,006,526
effective search space: 12325742880
effective search space used: 12325742880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.