SNX1 15799

Name: SNX1	Sequence: fasta or formatted (457aa)		NCBI GI: 23111032
Description: sorting nexin 1 isoform b		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [522aa] sorting nexin 1 isoform a alt prot [474aa] sorting nexin 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 41 2 C cysteine 0.4 2 1 D aspartate 4.6 21 1 E glutamate 11.4 52 2 F phenylalanine 4.4 20 2 G glycine 5.0 23 4 H histidine 1.8 8 1 I isoleucine 3.7 17 1 K lysine 8.1 37 2 L leucine 10.5 48 2 M methionine 2.0 9 1 N asparagine 3.3 15 2 P proline 4.2 19 4 Q glutamine 6.1 28 3 R arginine 5.5 25 2 S serine 7.2 33 3 T threonine 4.6 21 2 V valine 5.0 23 2 W tryptophan 1.3 6 1 Y tyrosine 2.0 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 1 isoform b SNX1 0.927 sorting nexin 1 isoform a SNX1 0.784 sorting nexin 1 isoform c SNX2 0.585 sorting nexin 2 SNX7 0.086 sorting nexin 7 isoform a SNX5 0.081 sorting nexin 5 SNX5 0.081 sorting nexin 5 SNX32 0.077 sorting nexin 6B SNX7 0.070 sorting nexin 7 isoform b SNX6 0.067 sorting nexin 6 isoform b SNX30 0.063 sorting nexin family member 30 SNX12 0.049 sorting nexin 12 SNX3 0.045 sorting nexin 3 isoform a HS1BP3 0.034 HCLS1 binding protein 3 SNX11 0.034 sorting nexin 11 SNX11 0.034 sorting nexin 11 SNX6 0.033 sorting nexin 6 isoform a SNX33 0.032 sorting nexin 33 SNX4 0.030 sorting nexin 4 SNX8 0.027 sorting nexin 8 SGK3 0.025 serum/glucocorticoid regulated kinase 3 isoform 2 [H... SGK3 0.025 serum/glucocorticoid regulated kinase 3 isoform 1 [H... SGK3 0.025 serum/glucocorticoid regulated kinase 3 isoform 1 [H... SNX16 0.024 sorting nexin 16 isoform a SNX16 0.024 sorting nexin 16 isoform a SNX18 0.023 sorting nexin 18 isoform c SNX18 0.023 sorting nexin 18 isoform a SNX18 0.023 sorting nexin 18 isoform b SNX10 0.023 sorting nexin 10 SNX17 0.022 sorting nexin 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.