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Search of human proteins with 157412255
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
(708 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] 1454 0.0
gi|41281725 praja 1 isoform a [Homo sapiens] 528 e-150
gi|74048537 praja 1 isoform b [Homo sapiens] 477 e-134
gi|21539663 praja 1 isoform c [Homo sapiens] 412 e-115
gi|37622894 ring finger protein 126 [Homo sapiens] 82 2e-15
gi|33859668 Rabring 7 [Homo sapiens] 75 2e-13
gi|7706039 ring finger protein 181 [Homo sapiens] 74 4e-13
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 59 2e-08
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 59 2e-08
gi|5174653 ring finger protein 6 [Homo sapiens] 57 6e-08
gi|34305295 ring finger protein 6 [Homo sapiens] 57 6e-08
gi|34305293 ring finger protein 6 [Homo sapiens] 57 6e-08
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 57 8e-08
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 55 2e-07
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 55 2e-07
gi|21040269 ring finger protein 133 [Homo sapiens] 54 4e-07
gi|29788758 ring finger protein 130 [Homo sapiens] 54 4e-07
gi|58331204 ring finger protein 150 [Homo sapiens] 54 7e-07
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 53 9e-07
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 53 9e-07
gi|217330641 IWS1 homolog [Homo sapiens] 53 1e-06
gi|29789407 ring finger protein 149 [Homo sapiens] 53 1e-06
gi|37675277 ring finger protein 148 [Homo sapiens] 52 1e-06
gi|150378447 zinc and ring finger 3 [Homo sapiens] 51 3e-06
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 51 3e-06
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 51 3e-06
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 51 3e-06
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 51 3e-06
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 51 3e-06
gi|7662486 ring finger protein 44 [Homo sapiens] 51 3e-06
>gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
Length = 708
Score = 1454 bits (3765), Expect = 0.0
Identities = 708/708 (100%), Positives = 708/708 (100%)
Query: 1 MSQYTEKEPAAMDQESGKAVWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAG 60
MSQYTEKEPAAMDQESGKAVWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAG
Sbjct: 1 MSQYTEKEPAAMDQESGKAVWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAG 60
Query: 61 DDYEVLELDDVPKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQSFV 120
DDYEVLELDDVPKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQSFV
Sbjct: 61 DDYEVLELDDVPKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQSFV 120
Query: 121 AVHHSEEGRDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDNDH 180
AVHHSEEGRDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDNDH
Sbjct: 121 AVHHSEEGRDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDNDH 180
Query: 181 LQLSAEVVEGSRYQESLGNTVFELENREAEAYTGLSPPVPSFNCEVRDEFEELDSVPLVK 240
LQLSAEVVEGSRYQESLGNTVFELENREAEAYTGLSPPVPSFNCEVRDEFEELDSVPLVK
Sbjct: 181 LQLSAEVVEGSRYQESLGNTVFELENREAEAYTGLSPPVPSFNCEVRDEFEELDSVPLVK 240
Query: 241 SSAGDTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQNTN 300
SSAGDTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQNTN
Sbjct: 241 SSAGDTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQNTN 300
Query: 301 DREKNHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREALEVEESGSDDL 360
DREKNHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREALEVEESGSDDL
Sbjct: 301 DREKNHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREALEVEESGSDDL 360
Query: 361 LIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGCGDYYQ 420
LIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGCGDYYQ
Sbjct: 361 LIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGCGDYYQ 420
Query: 421 LYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEE 480
LYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEE
Sbjct: 421 LYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEE 480
Query: 481 ENQELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPAFMLDGNNNLEDDS 540
ENQELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPAFMLDGNNNLEDDS
Sbjct: 481 ENQELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPAFMLDGNNNLEDDS 540
Query: 541 SVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVD 600
SVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVD
Sbjct: 541 SVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVD 600
Query: 601 VEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPC 660
VEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPC
Sbjct: 601 VEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPC 660
Query: 661 VSIWLQKSGTCPVCRRHFPPAVIEASAAPSSEPDPDAPPSNDSIAEAP 708
VSIWLQKSGTCPVCRRHFPPAVIEASAAPSSEPDPDAPPSNDSIAEAP
Sbjct: 661 VSIWLQKSGTCPVCRRHFPPAVIEASAAPSSEPDPDAPPSNDSIAEAP 708
>gi|41281725 praja 1 isoform a [Homo sapiens]
Length = 643
Score = 528 bits (1361), Expect = e-150
Identities = 316/700 (45%), Positives = 404/700 (57%), Gaps = 90/700 (12%)
Query: 12 MDQESGKAVWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAGDDYEVLELDDV 71
M QES K VWP P GGYQ+ TGRRYGRRHAYVSF+P ++ ER +
Sbjct: 1 MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQ------------- 47
Query: 72 PKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQS-FVAVHHSEEGRD 130
K+ +E+P SA +QTT+ S+S F S + +
Sbjct: 48 ------------------------RKTNSEVPMHRSAPSQTTKRSRSPFSTTRRSWDDSE 83
Query: 131 TLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDNDHLQLSAEVVEG 190
+ G++ N+ N Y P AS + G+A H DSY D E ++ +
Sbjct: 84 SSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHIDSYGADDSEEEGAGPVERPPVRGKT 143
Query: 191 SRYQESLGNTVFELENREAEAYTGLSPPVPSFNCEVRDEFEELDSVPLVKSSAGDTEFVH 250
++++ + +++ E + A + G P SF+ +VR+E ++LD VP + SA +F+
Sbjct: 144 GKFKD---DKLYDPE-KGARSLAGPPPHFSSFSRDVREERDKLDPVPAARCSASRADFLP 199
Query: 251 QNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQNTNDREKNHGSSP 310
Q+S Q SS+ ++ + + +++ +ER+ ++ P + P IC E S+
Sbjct: 200 QSSVASQSSSEGKLAT--KGDSSERERREQNLPARPSRAPVSICG-----GGENTSKSAE 252
Query: 311 EQVVRPKVRKLISSSQVDQETGFNRHEAKQ--RSVQRWREALEVEESGSDDLLIKCEEYD 368
E VVRPK+R L S + V + F+ + S RWR+ E SD L +
Sbjct: 253 EPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEGHSDGLARRGR--- 309
Query: 369 GEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGCGDYYQLYDKDEDS 428
GE + +P Y +RE ++Q+ E R D FW DYY+ D+D DS
Sbjct: 310 GESSSGYPEPKYPE--DKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKYCDEDSDS 367
Query: 429 SECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEP------------------- 469
D EW A+L ++ E+ SSS ESWETLPGK+E EP
Sbjct: 368 ----DKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSPGPGASA 423
Query: 470 --------ELQSDSSGPEEENQELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPAN 521
S+ S EE +E SLQE EQ SLEEGEIPWLQY+E N+SSS+ N+ +
Sbjct: 424 SAGAGAGASAGSNGSNYLEEVREPSLQE-EQASLEEGEIPWLQYHE-NDSSSEGDNDSGH 481
Query: 522 EFAQPA-FMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMALE 580
E QP FMLDGNNNLEDDSSVSEDL+VDWSLFDGFADGLGVAEAISYVDPQFLTYMALE
Sbjct: 482 ELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMALE 541
Query: 581 ERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSE 640
ERLAQAMETALAHLESLAVDVEVANPPASKESID LPE LV EDH A+GQE CCPICCSE
Sbjct: 542 ERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSE 601
Query: 641 YIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPP 680
Y+K ++ATELPCHH+FHKPCVSIWLQKSGTCPVCR FPP
Sbjct: 602 YVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 641
>gi|74048537 praja 1 isoform b [Homo sapiens]
Length = 588
Score = 477 bits (1228), Expect = e-134
Identities = 283/605 (46%), Positives = 363/605 (60%), Gaps = 53/605 (8%)
Query: 107 SALNQTTESSQS-FVAVHHSEEGRDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHT 165
SA +QTT+ S+S F S + ++ G++ N+ N Y P AS + G+A H
Sbjct: 4 SAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHI 63
Query: 166 DSYDPDGKHGEDNDHLQLSAEVVEGSRYQESLGNTVFELENREAEAYTGLSPPVPSFNCE 225
DSY D E ++ + ++++ + +++ E + A + G P SF+ +
Sbjct: 64 DSYGADDSEEEGAGPVERPPVRGKTGKFKD---DKLYDPE-KGARSLAGPPPHFSSFSRD 119
Query: 226 VRDEFEELDSVPLVKSSAGDTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPED 285
VR+E ++LD VP + SA +F+ Q+S Q SS+ ++ + + +++ +ER+ ++ P
Sbjct: 120 VREERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLAT--KGDSSERERREQNLPAR 177
Query: 286 AACGPGHICSEQNTNDREKNHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQ--RSV 343
+ P IC E S+ E VVRPK+R L S + V + F+ + S
Sbjct: 178 PSRAPVSICG-----GGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHST 232
Query: 344 QRWREALEVEESGSDDLLIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAG 403
RWR+ E SD L + GE + +P Y +RE ++Q+ E
Sbjct: 233 SRWRDTANDNEGHSDGLARRGR---GESSSGYPEPKYPE--DKREARSDQVKPEKVPRRR 287
Query: 404 RQEVDNTFWNGCGDYYQLYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPG 463
R D FW DYY+ D+D DS D EW A+L ++ E+ SSS ESWETLPG
Sbjct: 288 RTMADPDFWTHSDDYYKYCDEDSDS----DKEWIAALRRKYRSREQTLSSSGESWETLPG 343
Query: 464 KDENEP---------------------------ELQSDSSGPEEENQELSLQEGEQTSLE 496
K+E EP S+ S EE +E SLQE EQ SLE
Sbjct: 344 KEEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQE-EQASLE 402
Query: 497 EGEIPWLQYNEVNESSSDEGNEPANEFAQPA-FMLDGNNNLEDDSSVSEDLDVDWSLFDG 555
EGEIPWLQY+E N+SSS+ N+ +E QP FMLDGNNNLEDDSSVSEDL+VDWSLFDG
Sbjct: 403 EGEIPWLQYHE-NDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDG 461
Query: 556 FADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDG 615
FADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESID
Sbjct: 462 FADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDA 521
Query: 616 LPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
LPE LV EDH A+GQE CCPICCSEY+K ++ATELPCHH+FHKPCVSIWLQKSGTCPVCR
Sbjct: 522 LPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
Query: 676 RHFPP 680
FPP
Sbjct: 582 CMFPP 586
>gi|21539663 praja 1 isoform c [Homo sapiens]
Length = 455
Score = 412 bits (1059), Expect = e-115
Identities = 231/422 (54%), Positives = 268/422 (63%), Gaps = 46/422 (10%)
Query: 293 ICSEQNTNDREKNHGSSPEQVVRPKVRKLISSSQVDQE------TGFNRHEAKQRSVQRW 346
I S++ TN H S+P Q + + R S+++ + T N S RW
Sbjct: 44 IASQRKTNSEVPMHRSAPSQTTK-RSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRW 102
Query: 347 REALEVEESGSDDLLIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQE 406
R+ E SD L + GE + +P Y +RE ++Q+ E R
Sbjct: 103 RDTANDNEGHSDGLARRGR---GESSSGYPEPKYPE--DKREARSDQVKPEKVPRRRRTM 157
Query: 407 VDNTFWNGCGDYYQLYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDE 466
D FW DYY+ D+D DS D EW A+L ++ E+ SSS ESWETLPGK+E
Sbjct: 158 ADPDFWTHSDDYYKYCDEDSDS----DKEWIAALRRKYRSREQTLSSSGESWETLPGKEE 213
Query: 467 NEP---------------------------ELQSDSSGPEEENQELSLQEGEQTSLEEGE 499
EP S+ S EE +E SLQE EQ SLEEGE
Sbjct: 214 REPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQE-EQASLEEGE 272
Query: 500 IPWLQYNEVNESSSDEGNEPANEFAQPA-FMLDGNNNLEDDSSVSEDLDVDWSLFDGFAD 558
IPWLQY+E N+SSS+ N+ +E QP FMLDGNNNLEDDSSVSEDL+VDWSLFDGFAD
Sbjct: 273 IPWLQYHE-NDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 331
Query: 559 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPE 618
GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESID LPE
Sbjct: 332 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 391
Query: 619 TLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHF 678
LV EDH A+GQE CCPICCSEY+K ++ATELPCHH+FHKPCVSIWLQKSGTCPVCR F
Sbjct: 392 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 451
Query: 679 PP 680
PP
Sbjct: 452 PP 453
Score = 72.8 bits (177), Expect = 1e-12
Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 38/130 (29%)
Query: 12 MDQESGKAVWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAGDDYEVLELDDV 71
M QES K VWP P GGYQ+ TGRRYGRRHAYVSF+P ++ ER +
Sbjct: 1 MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQ------------- 47
Query: 72 PKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQS-FVAVHHSEEGRD 130
K+ +E+P SA +QTT+ S+S F S + +
Sbjct: 48 ------------------------RKTNSEVPMHRSAPSQTTKRSRSPFSTTRRSWDDSE 83
Query: 131 TLGSSTNLHN 140
+ G++ N+ N
Sbjct: 84 SSGTNLNIDN 93
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 82.0 bits (201), Expect = 2e-15
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 606 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 665
PPA KE I LP V E+H G E CP+C +Y + +LPC+H FH C+ WL
Sbjct: 203 PPADKEKIQALPTVPVTEEHVGSGLE--CPVCKDDYALGERVRQLPCNHLFHDGCIVPWL 260
Query: 666 QKSGTCPVCRRHF--------PPAVIEASAAPSSEPDPDAPPSNDS 703
++ +CPVCR+ PP + S + SS + PSN++
Sbjct: 261 EQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNEN 306
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 75.5 bits (184), Expect = 2e-13
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 606 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 665
PPA KE I LP V ++ +G E CP+C +Y ++ +LPC+HFFH C+ WL
Sbjct: 202 PPADKEKITSLPTVTVTQEQVDMGLE--CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL 259
Query: 666 QKSGTCPVCRR 676
+ TCPVCR+
Sbjct: 260 ELHDTCPVCRK 270
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 74.3 bits (181), Expect = 4e-13
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 606 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 665
PPA+K ++ LP T++ E CP+C E+ +++ A E+PCHH FH C+ WL
Sbjct: 52 PPAAKTVVENLPRTVIRGSQA----ELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWL 107
Query: 666 QKSGTCPVCRRHFP 679
K+ +CP+CR P
Sbjct: 108 SKTNSCPLCRYELP 121
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 58.9 bits (141), Expect = 2e-08
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 614 DGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPV 673
D PE L D+ C IC E + A LPC+H FH C+ W Q+ TCP
Sbjct: 278 DATPEELQAMDNV-------CIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328
Query: 674 CRRHFPPAVIEASAAPSSEPDPDAPP 699
CR A + A + P EP PP
Sbjct: 329 CRMDVLRASLPAQSPPPPEPADQGPP 354
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 58.9 bits (141), Expect = 2e-08
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 614 DGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPV 673
D PE L D+ C IC E + A LPC+H FH C+ W Q+ TCP
Sbjct: 278 DATPEELQAMDNV-------CIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328
Query: 674 CRRHFPPAVIEASAAPSSEPDPDAPP 699
CR A + A + P EP PP
Sbjct: 329 CRMDVLRASLPAQSPPPPEPADQGPP 354
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 57.0 bits (136), Expect = 6e-08
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 609 SKESIDGLPETLVLEDHTAIGQE--QCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQ 666
+KE ID L +H +I E + C +C S+Y+ + +LPC H FH C+ WL
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
Query: 667 KSGTCPVCRR 676
++ TCP+CR+
Sbjct: 665 ENCTCPICRQ 674
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 57.0 bits (136), Expect = 6e-08
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 609 SKESIDGLPETLVLEDHTAIGQE--QCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQ 666
+KE ID L +H +I E + C +C S+Y+ + +LPC H FH C+ WL
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
Query: 667 KSGTCPVCRR 676
++ TCP+CR+
Sbjct: 665 ENCTCPICRQ 674
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 57.0 bits (136), Expect = 6e-08
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 609 SKESIDGLPETLVLEDHTAIGQE--QCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQ 666
+KE ID L +H +I E + C +C S+Y+ + +LPC H FH C+ WL
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
Query: 667 KSGTCPVCRR 676
++ TCP+CR+
Sbjct: 665 ENCTCPICRQ 674
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 56.6 bits (135), Expect = 8e-08
Identities = 88/487 (18%), Positives = 172/487 (35%), Gaps = 30/487 (6%)
Query: 69 DDVPKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQSFVAVHHSEEG 128
D + S S ++ DSS S+ S++ + S + +++S++S + S+
Sbjct: 843 DSSDSSDGSDSDSSNRSDSSNSSD----SSDSSDSSNSSDSSDSSDSNESSNSSDSSDSS 898
Query: 129 RDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDNDHLQLSAEVV 188
+ S++ N S+ + +S N +S D + D+ S+
Sbjct: 899 NSSDSDSSDSSNSSDSSDSSNSSDSSESSNS----SDNSNSSDSSNSSDSSDSSDSSNSS 954
Query: 189 EGSRYQESLGNTVFELENREAEAYTGLSPPVPSFNCEVRDEFEELDSVPLVKSSAGDTEF 248
+ S +S N+ ++ +++ + S + + D + DS SS
Sbjct: 955 DSSNSSDS-SNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1013
Query: 249 VHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQNTNDREKNHGS 308
NS + SS S ++ S + D++ N++D + S
Sbjct: 1014 DSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSS-------DSSNSSDSSDSSDS 1066
Query: 309 SPEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREALEVEESGSDDLLIKCEEYD 368
S SS D N ++ S + S S D + D
Sbjct: 1067 SDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSS-------DSSDSSDSSDSSDSSD 1119
Query: 369 GEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEV-DNTFWNGCGDYYQLYDKDED 427
+ D S ++ N+ +S+S ++ + D++ + D D +
Sbjct: 1120 SSNSSDSSDSSDSS--DSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDS 1177
Query: 428 SSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEEENQELSL 487
S+ + S S S D S S +S ++ D ++ SDSS + N+
Sbjct: 1178 SNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDS 1237
Query: 488 QEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPAFMLDGNNNLEDDSSVSEDLD 547
+ +S ++ ++S+SD +E ++ +GNNN D S SE D
Sbjct: 1238 SDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSG----NGNNNGSDSDSDSEGSD 1293
Query: 548 VDWSLFD 554
+ S D
Sbjct: 1294 SNHSTSD 1300
Score = 47.8 bits (112), Expect = 4e-05
Identities = 81/489 (16%), Positives = 173/489 (35%), Gaps = 24/489 (4%)
Query: 59 AGDDYEVLELDDVPKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQS 118
+ D + + D NSS SS S S + S++ + + N++ S+ S
Sbjct: 806 SSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSS 865
Query: 119 FVAVHHSEEGRDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDN 178
S + D+ SS + + E S++S + + +DS D + D+
Sbjct: 866 -----DSSDSSDSSNSSDSSDSSDSNE------SSNSSDSSDSSNSSDSDSSDSSNSSDS 914
Query: 179 DHLQLSAEVVEGSRYQESLGNTVFELENREAEAYTGLSPPVPSFNCEVRDEFEELDSVPL 238
S++ E S ++ ++ + +++ + S + + + + DS
Sbjct: 915 SDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDS--- 971
Query: 239 VKSSAGDTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQN 298
+S+ ++ + + S D S+ N++ ++ S + + N
Sbjct: 972 --NSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSN 1029
Query: 299 TNDREKNHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREALEVEESGSD 358
++D + SS SS+ D + ++ S + E S S
Sbjct: 1030 SSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSS-DSSDSSESSDSS 1088
Query: 359 DLLIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGCGDY 418
D + D D S + +N S S ++ D++ + D
Sbjct: 1089 DSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDS-SDSSDSSDSSDSSNSSDSSDS 1147
Query: 419 YQLYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGP 478
+ D DSS+ SD S+ S D S S S ++ D ++ SDSS
Sbjct: 1148 SESSDSS-DSSDSSDSSDSSD-----SSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDS 1201
Query: 479 EEENQELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPAFMLDGNNNLED 538
+ + + +S ++ NESS + +++ + + D +++ +
Sbjct: 1202 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDS 1261
Query: 539 DSSVSEDLD 547
S +++ D
Sbjct: 1262 TSDSNDESD 1270
Score = 45.4 bits (106), Expect = 2e-04
Identities = 82/490 (16%), Positives = 165/490 (33%), Gaps = 56/490 (11%)
Query: 70 DVPKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQSFVAVHHSEEGR 129
D K+N +GS D S S++ G+ N ++ +S S+
Sbjct: 496 DESKDNGNGSDSKGAEDDDSDSTSDTNNSDSN----GNGNNGNDDNDKSDSGKGKSDSSD 551
Query: 130 DTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDNDHLQLSAEVVE 189
S+N + S+ + S SS + + +DS D D+ + S++ +
Sbjct: 552 SDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSS--DSDSSDSSDSDSSDSSNSSDSSDSSD 609
Query: 190 GSRYQESLGNTVFELENREAEAYTG----LSPPVPSFNCEVRDEFEELDSVPLVKSSAGD 245
S +S ++ + ++ ++E+ + S S + + D + DS SS
Sbjct: 610 SSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSS 669
Query: 246 TEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQNTNDREKN 305
+S SS S ++ S E D+ S N++D + +
Sbjct: 670 DSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSS 729
Query: 306 HGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREALEVEESGSDDLLIKCE 365
+ S SS D N ++ S + S S D +
Sbjct: 730 NSSDSSDSSN-------SSDSSDSSDSSNSSDSSDSS----------DSSNSSDSSDSSD 772
Query: 366 EYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGCGDYYQLYDKD 425
D + +++N ++ S ++ D++ + D D D
Sbjct: 773 SSDSSD-------------SSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSD 819
Query: 426 EDS----------SECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDS 475
+ S+ S+ S+ G++ D S+ +S + D ++ SDS
Sbjct: 820 SSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDS 879
Query: 476 SGPEEENQELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPAFMLDGNNN 535
S + N+ + + +S + + S+S + ++ +N +N+
Sbjct: 880 SDSSDSNESSNSSDSSDSSNSSDS------DSSDSSNSSDSSDSSNSSDSSESSNSSDNS 933
Query: 536 LEDDSSVSED 545
DSS S D
Sbjct: 934 NSSDSSNSSD 943
Score = 40.0 bits (92), Expect = 0.007
Identities = 77/425 (18%), Positives = 145/425 (34%), Gaps = 38/425 (8%)
Query: 128 GRDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDNDHLQLSAEV 187
G D S ++ ++ S G+ + + NG D K ED+D S
Sbjct: 473 GNDDANSESDNNSSSRGDASYNSDESKDNGNG----------SDSKGAEDDDSDSTSDTN 522
Query: 188 VEGSRYQESLGNTVFELENREAEAYTGLSPPVPSFNCEVR---DEFEELDSVPLVKSSAG 244
S + GN +N ++++ G S S + + D + DS +S+
Sbjct: 523 NSDSNGNGNNGND----DNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSS 578
Query: 245 DTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQNTNDREK 304
D++ +S + S + ++ +++S + S + + SE +++D +
Sbjct: 579 DSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDS 638
Query: 305 NHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREALEVEESGSDDLLIKC 364
SS SS D N + S + S S D
Sbjct: 639 KSDSSDSN-------SSDSSDNSDSSDSSNSSNSSDSS----------DSSDSSDSSSSS 681
Query: 365 EEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGC--GDYYQLY 422
+ + D S + ++ +S+S ++ D+ N D
Sbjct: 682 DSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSS 741
Query: 423 DKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEEEN 482
D + S + + S S S D S S +S ++ D N+ SDSS +
Sbjct: 742 DSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSS 801
Query: 483 QELSLQEGEQTSLEEGEIPWLQYNEVNES-SSDEGN-EPANEFAQPAFMLDGNNNLEDDS 540
+ + +S + N S SSD N +++ + + D +++ DS
Sbjct: 802 DSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDS 861
Query: 541 SVSED 545
S S D
Sbjct: 862 SNSSD 866
Score = 38.9 bits (89), Expect = 0.017
Identities = 93/515 (18%), Positives = 183/515 (35%), Gaps = 31/515 (6%)
Query: 56 LGRAGDDYEVLELDDVPKENSSGSSPLDQVDSSLPSEPIFEKSETEI-PTCGSALNQTTE 114
+G AG + +V + + + + ++ D D + + E + +EI P S N T E
Sbjct: 167 VGDAGHNEDVAVVQEDGPQVAGSNNSTDNEDEIIENSCRNEGNTSEITPQINSKRNGTKE 226
Query: 115 SSQSFVAVHHSEEGRDTLGSSTNLHNHSEGEYI-PGACSASSVQNGIALVHTDSYDPDGK 173
+ + + G D S + + E E G NG +
Sbjct: 227 AEVT--PGTGEDAGLDNSDGSPSGNGADEDEDEGSGDDEDEEAGNGKDSSNNSKGQEGQD 284
Query: 174 HGEDNDHLQLSAEVVEGSRYQESLG--NTVFELENREAEAYTGLSPPVPSFNCEVRDEFE 231
HG+++DH + + Y + G + E++ + S +P N R E
Sbjct: 285 HGKEDDHDSSIGQNSDSKEYYDPEGKEDPHNEVDGDKTSKSEENSAGIPEDNGSQR--IE 342
Query: 232 ELDSVPLVKSSAGDTEFVHQNSQEIQRSSQDEMVSTK-----QQNNTSQERQTEHSPEDA 286
+ + +S + ++ SQD+ + K +N T + + ED
Sbjct: 343 DTQKLNHRESKRVENRITKESETHAVGKSQDKGIEIKGPSSGNRNITKEVGKGNEGKEDK 402
Query: 287 ACGPGHICSEQNTNDR-EKNHGSSPEQVVRPKVRKLISSSQVDQET-GFNRHEAKQRSVQ 344
G I + N + E + P Q P + S++ D + G++ ++ +S+Q
Sbjct: 403 G-QHGMILGKGNVKTQGEVVNIEGPGQKSEPGNKVGHSNTGSDSNSDGYDSYDFDDKSMQ 461
Query: 345 RWREALEVEESGSDDLLIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGA---- 400
E +G+DD + + D Y+ + +N + GA
Sbjct: 462 GDDPNSSDESNGNDDANSESDNNSSSRG----DASYN---SDESKDNGNGSDSKGAEDDD 514
Query: 401 TAGRQEVDNTFWNGCG----DYYQLYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDE 456
+ + +N+ NG G D D + S+ SD + S S S D SSD
Sbjct: 515 SDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDS 574
Query: 457 SWETLPGKDENEPELQSDSSGPEEENQELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEG 516
+ + +++ SDS + N S + + + ++ ++S SD
Sbjct: 575 NSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSS 634
Query: 517 NEPANEFAQPAFMLDGNNNLEDDSSVSEDLDVDWS 551
+ + + + D ++N + S + D S
Sbjct: 635 DSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSS 669
Score = 37.0 bits (84), Expect = 0.063
Identities = 101/524 (19%), Positives = 179/524 (34%), Gaps = 69/524 (13%)
Query: 52 HERSLGRAGDDYEVLELDDVPKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQ 111
H+ S+G+ D E D KE+ P ++VD S+ E++ IP + Q
Sbjct: 291 HDSSIGQNSDSKEYY--DPEGKED-----PHNEVDGDKTSKS--EENSAGIPEDNGS--Q 339
Query: 112 TTESSQSFVAVHHSE----EGRDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVH--T 165
E +Q ++H E E R T S T+ S+ + I +S +N V
Sbjct: 340 RIEDTQK---LNHRESKRVENRITKESETHAVGKSQDKGIEIKGPSSGNRNITKEVGKGN 396
Query: 166 DSYDPDGKHGE--DNDHLQLSAEVV--EGSRYQESLGNTV----------------FELE 205
+ + G+HG +++ EVV EG + GN V ++ +
Sbjct: 397 EGKEDKGQHGMILGKGNVKTQGEVVNIEGPGQKSEPGNKVGHSNTGSDSNSDGYDSYDFD 456
Query: 206 NREAEAYTGLSPPVPSFNCEVRDEFEELDSVPLVKSSAGDTEFVHQNSQEIQRSSQDEMV 265
++ + S + N + E + S S D + N + + + D+
Sbjct: 457 DKSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSD 516
Query: 266 STKQQNNTSQERQTEHSPED---AACGPGHICSEQNTNDREKNHGSSPEQVVRPKVRKLI 322
ST NN+ + +D + G G S + + N S +
Sbjct: 517 STSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDS---------- 566
Query: 323 SSSQVDQETGFNRHEAKQRSVQRWREALEVEESGSDDLLIKCEEYDGEHDCMFLDPPYSR 382
S S + ++ ++ + S S D + D D
Sbjct: 567 SDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDS 626
Query: 383 VITQRETENNQMTSESGATAGRQEVDNTFWNGCGDYYQLYDKDEDSSECSD-GEWSASLP 441
++ ++ ++ S+S + DN+ + + DSS+ SD + S+S
Sbjct: 627 SKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNS----SNSSDSSDSSDSSDSSSSSD 682
Query: 442 HRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEEENQELSLQEGEQTSLEEGEIP 501
S D S S S E+ D ++ + SDSS N S S +
Sbjct: 683 SSNSSDSSDSSDSSNSSESSDSSDSSDSD-SSDSSDSSNSNSSDSDSSNSSDSSDSS--- 738
Query: 502 WLQYNEVNESSSDEGNEPANEFAQPAFMLDGNNNLEDDSSVSED 545
N S S + ++ +N N++ DSS S D
Sbjct: 739 -------NSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSD 775
Score = 33.9 bits (76), Expect = 0.53
Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 3/159 (1%)
Query: 390 ENNQMTSESGATAGRQEVDNTFWNGCGDYYQLYDKDE-DSSECSDGEWSASLPHRFSGTE 448
++N + + + D++ + D D D DS+ SD + S S ++
Sbjct: 535 DDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDS--DSSDSSD 592
Query: 449 KDQSSSDESWETLPGKDENEPELQSDSSGPEEENQELSLQEGEQTSLEEGEIPWLQYNEV 508
D S S S ++ D ++ SDSS + ++ + + S + +
Sbjct: 593 SDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSD 652
Query: 509 NESSSDEGNEPANEFAQPAFMLDGNNNLEDDSSVSEDLD 547
N SSD N + + + +++ D S+ S+ D
Sbjct: 653 NSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSD 691
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 55.1 bits (131), Expect = 2e-07
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 609 SKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKS 668
+KE ID L E+ + C +C +EY + + +LPC H +H C+ WL ++
Sbjct: 549 TKEQIDNLAMRSFGENDAL----KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604
Query: 669 GTCPVCRR 676
TCP+CRR
Sbjct: 605 STCPICRR 612
Score = 31.2 bits (69), Expect = 3.5
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 428 SSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEEENQELSL 487
SS S S+S P SG E ++SSD + NE S SSG E +
Sbjct: 464 SSSSSSSSSSSSSPSSSSGGESSETSSDLF------EGSNEGSSSSGSSGARREGRH--- 514
Query: 488 QEGEQTSLEEGEIPWL---QYNEVNESSSDE 515
T E G +P+L Q+ +NE D+
Sbjct: 515 -RAPVTFDESGSLPFLSLAQFFLLNEDDDDQ 544
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 55.1 bits (131), Expect = 2e-07
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 609 SKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKS 668
+KE ID L E+ + C +C +EY + + +LPC H +H C+ WL ++
Sbjct: 549 TKEQIDNLAMRSFGENDAL----KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604
Query: 669 GTCPVCRR 676
TCP+CRR
Sbjct: 605 STCPICRR 612
Score = 31.2 bits (69), Expect = 3.5
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 428 SSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEEENQELSL 487
SS S S+S P SG E ++SSD + NE S SSG E +
Sbjct: 464 SSSSSSSSSSSSSPSSSSGGESSETSSDLF------EGSNEGSSSSGSSGARREGRH--- 514
Query: 488 QEGEQTSLEEGEIPWL---QYNEVNESSSDE 515
T E G +P+L Q+ +NE D+
Sbjct: 515 -RAPVTFDESGSLPFLSLAQFFLLNEDDDDQ 544
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 54.3 bits (129), Expect = 4e-07
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 634 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
C IC Y +DI L C HFFHK C+ W+ GTCP+C+
Sbjct: 256 CVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICK 297
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 54.3 bits (129), Expect = 4e-07
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 634 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
C +C Y ++D+ LPC H FHK CV WL + TCP+C+
Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCK 305
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 53.5 bits (127), Expect = 7e-07
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 608 ASKESIDGLP-ETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQ 666
A+K++I L T+ D C +C Y +D+ LPC H FHK CV WL
Sbjct: 251 AAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLL 310
Query: 667 KSGTCPVCRRHFPPAVIEASAAPSSEPDPDAPPSN 701
TCP+C+ + +++A P + D P++
Sbjct: 311 DHRTCPMCKMN----ILKALGIPPNADCMDDLPTD 341
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 53.1 bits (126), Expect = 9e-07
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 634 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
C IC E++ D LPC HFFH C+ WL +S TCP CR
Sbjct: 88 CVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCR 129
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 53.1 bits (126), Expect = 9e-07
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 634 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
C IC E++ D LPC HFFH C+ WL +S TCP CR
Sbjct: 88 CVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCR 129
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 52.8 bits (125), Expect = 1e-06
Identities = 103/494 (20%), Positives = 188/494 (38%), Gaps = 69/494 (13%)
Query: 69 DDVPK----ENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQSFVAVHH 124
D +PK +S PL+ S SE + + +++ + A ++S V H
Sbjct: 58 DGLPKGHHVTDSENDEPLNLNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHG 117
Query: 125 SEEGRDTLGSSTNLHNHSEGEYIPGACSASS-VQNGIALVHTDSYDPD-GKH-GEDNDHL 181
S+ + E +PG+ S + + NG A +DS + D GKH D++
Sbjct: 118 SDSESE------------ETRKLPGSDSENEELLNGHA---SDSENEDVGKHPASDSEIE 162
Query: 182 QLSAEVVEGSRYQESLGNTVFELENREAEAYTGLS-----PPVPSFNCEVRDEFEELDSV 236
+L S +++L + + E+ E + PP P + E EEL
Sbjct: 163 ELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMS---DSESEELPK- 218
Query: 237 PLVKSSAGDTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSE 296
P V S + HQ S +S + + + + ++ E+ P S+
Sbjct: 219 PQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDSENEEL---PKPRISD 275
Query: 297 QNTNDREKNHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREALEVEESG 356
+ D +N S E PK R S S+ Q+ + E + S R + E
Sbjct: 276 SESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETEDAS----RHKQKPESDD 331
Query: 357 SDDLLIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGCG 416
D K E+ + ++D D + M + ++ +E ++
Sbjct: 332 DSDRENKGEDTEMQNDSFHSD--------------SHMDRKKFHSSDSEEEEHK------ 371
Query: 417 DYYQLYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSS 476
Q D DED E + + + S +E ++ +S + + D+++ + SD S
Sbjct: 372 --KQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSDSDAVSDKS 429
Query: 477 GPEEENQELSLQE--GEQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPAFMLDGNN 534
G E+ +E G++ S ++ E ++ S S+ GNE N A F G+
Sbjct: 430 GKREKTIASDSEEEAGKELSDKKNE-----EKDLFGSDSESGNEEENLIAD-IFGESGDE 483
Query: 535 NLEDDSSVS-EDLD 547
E+ + + EDL+
Sbjct: 484 EEEEFTGFNQEDLE 497
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 52.8 bits (125), Expect = 1e-06
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 634 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHF--------PPAVIEA 685
C +C + DI LPC H FH+ C+ WL TCP+C+ P ++
Sbjct: 269 CAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGEPGDVQE 328
Query: 686 SAAPSSEPDPDAPPSNDSIA 705
AP S P D P +N S+A
Sbjct: 329 MPAPESPPGRD-PAANLSLA 347
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 52.4 bits (124), Expect = 1e-06
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 610 KESIDGLPETLVLEDHTAIG-QEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKS 668
K++ID L ++ E + E C +C Y D+ L C HFFHK C+ WL
Sbjct: 233 KKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAH 292
Query: 669 GTCPVCR 675
TCP+C+
Sbjct: 293 RTCPMCK 299
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 51.2 bits (121), Expect = 3e-06
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 634 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIEASAAPSS 691
C IC +YI + +PC H FH+ CV WL + TCP CR + +IE PS+
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHN----IIEQKGNPSA 246
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 51.2 bits (121), Expect = 3e-06
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 569 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAI 628
V P F + +E+ + E L E L E +K I+ LP + +
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLP-SYRFNPNNHQ 374
Query: 629 GQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
++ C +C ++ + LPC+H FH CV WL+ + TCP+CR
Sbjct: 375 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 51.2 bits (121), Expect = 3e-06
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 569 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAI 628
V P F + +E+ + E L E L E +K I+ LP + +
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLP-SYRFNPNNHQ 374
Query: 629 GQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
++ C +C ++ + LPC+H FH CV WL+ + TCP+CR
Sbjct: 375 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 51.2 bits (121), Expect = 3e-06
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 569 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAI 628
V P F + +E+ + E L E L E +K I+ LP + +
Sbjct: 352 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLP-SYRFNPNNHQ 407
Query: 629 GQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
++ C +C ++ + LPC+H FH CV WL+ + TCP+CR
Sbjct: 408 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 51.2 bits (121), Expect = 3e-06
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 569 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAI 628
V P F + +E+ + E L E L E +K I+ LP + +
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLP-SYRFNPNNHQ 374
Query: 629 GQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
++ C +C ++ + LPC+H FH CV WL+ + TCP+CR
Sbjct: 375 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 51.2 bits (121), Expect = 3e-06
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 569 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAI 628
V P F + +E+ + E L E L E +K I+ LP + +
Sbjct: 402 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLP-SYRFNPNNHQ 457
Query: 629 GQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
++ C +C ++ + LPC+H FH CV WL+ + TCP+CR
Sbjct: 458 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 51.2 bits (121), Expect = 3e-06
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 609 SKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKS 668
+K I+ LP D ++ C +C S++ + LPC+H FH CV WL+ +
Sbjct: 356 TKADIEQLPSYRFNPDSHQ-SEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKAN 414
Query: 669 GTCPVCR 675
TCP+CR
Sbjct: 415 RTCPICR 421
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.126 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,992,528
Number of Sequences: 37866
Number of extensions: 1518499
Number of successful extensions: 6771
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 259
Number of HSP's that attempted gapping in prelim test: 6024
Number of HSP's gapped (non-prelim): 782
length of query: 708
length of database: 18,247,518
effective HSP length: 109
effective length of query: 599
effective length of database: 14,120,124
effective search space: 8457954276
effective search space used: 8457954276
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.