PJA1 27684

Name: PJA1	Sequence: fasta or formatted (643aa)		NCBI GI: 41281725
Description: praja 1 isoform a		Referenced in: Ring Finger Proteins
Other entries for this name: alt prot [455aa] praja 1 isoform c alt prot [588aa] praja 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 49 2 C cysteine 2.0 13 2 D aspartate 7.5 48 5 E glutamate 9.5 61 3 F phenylalanine 2.3 15 2 G glycine 7.5 48 3 H histidine 2.2 14 2 I isoleucine 2.0 13 1 K lysine 4.4 28 1 L leucine 5.1 33 1 M methionine 1.7 11 1 N asparagine 3.1 20 3 P proline 8.2 53 3 Q glutamine 3.0 19 1 R arginine 8.1 52 4 S serine 12.4 80 3 T threonine 4.0 26 2 V valine 4.7 30 2 W tryptophan 1.4 9 1 Y tyrosine 3.3 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 praja 1 isoform a PJA1 0.912 praja 1 isoform b PJA1 0.553 praja 1 isoform c PJA2 0.386 praja 2, RING-H2 motif containing RNF126 0.044 ring finger protein 126 RNF115 0.040 Rabring 7 RNF181 0.036 ring finger protein 181 RNF6 0.026 ring finger protein 6 RNF6 0.026 ring finger protein 6 RNF6 0.026 ring finger protein 6 RLIM 0.024 ring finger protein, LIM domain interacting RLIM 0.024 ring finger protein, LIM domain interacting LOC100290625 0.023 PREDICTED: hypothetical protein XP_002347002 LOC100289630 0.023 PREDICTED: hypothetical protein XP_002342853 RNF133 0.023 ring finger protein 133 RNF44 0.023 ring finger protein 44 RNF38 0.022 ring finger protein 38 isoform 2 RNF38 0.022 ring finger protein 38 isoform 2 RNF38 0.022 ring finger protein 38 isoform 3 RNF38 0.022 ring finger protein 38 isoform 2 RNF38 0.022 ring finger protein 38 isoform 1 RNF130 0.021 ring finger protein 130 ZNRF3 0.021 zinc and ring finger 3 RNF148 0.021 ring finger protein 148 SYVN1 0.021 synoviolin 1 isoform b SYVN1 0.021 synoviolin 1 isoform a RNF167 0.021 ring finger protein 167 RNF128 0.020 ring finger protein 128 isoform 1 RNF128 0.020 ring finger protein 128 isoform 2 RNF150 0.020 ring finger protein 150 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.