Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 15718712
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15718712 caspase 8 isoform E [Homo sapiens]
(235 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15718712 caspase 8 isoform E [Homo sapiens] 456 e-129
gi|122056476 caspase 8 isoform G precursor [Homo sapiens] 382 e-106
gi|15718706 caspase 8 isoform B precursor [Homo sapiens] 382 e-106
gi|122056474 caspase 8 isoform C precursor [Homo sapiens] 353 9e-98
gi|15718708 caspase 8 isoform C precursor [Homo sapiens] 353 9e-98
gi|15718704 caspase 8 isoform A precursor [Homo sapiens] 336 9e-93
gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens] 88 7e-18
gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens] 88 7e-18
gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens] 88 7e-18
gi|187608585 CASP8 and FADD-like apoptosis regulator isoform 2 [... 72 4e-13
gi|187608577 CASP8 and FADD-like apoptosis regulator isoform 1 [... 72 4e-13
gi|187608571 CASP8 and FADD-like apoptosis regulator isoform 1 [... 72 4e-13
gi|4505229 Fas-associated via death domain [Homo sapiens] 49 3e-06
gi|58530842 desmoplakin isoform II [Homo sapiens] 42 5e-04
gi|4505705 phosphoprotein enriched in astrocytes 15 [Homo sapiens] 42 6e-04
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 38 0.007
gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo s... 36 0.025
gi|50980301 myosin phosphatase-Rho interacting protein isoform 2... 34 0.095
gi|50980307 myosin phosphatase-Rho interacting protein isoform 1... 34 0.095
gi|45439327 periplakin [Homo sapiens] 34 0.12
gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH po... 33 0.21
gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH po... 33 0.21
gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo s... 33 0.21
gi|148596998 coiled-coil domain containing 122 [Homo sapiens] 33 0.21
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 33 0.28
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 33 0.28
gi|58530840 desmoplakin isoform I [Homo sapiens] 32 0.36
gi|52485606 formin-like 2 [Homo sapiens] 32 0.47
gi|150010604 kinesin family member 4B [Homo sapiens] 32 0.62
gi|89353287 death effector domain-containing protein [Homo sapiens] 32 0.62
>gi|15718712 caspase 8 isoform E [Homo sapiens]
Length = 235
Score = 456 bits (1174), Expect = e-129
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS
Sbjct: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
Query: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF
Sbjct: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
Query: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 180
KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE
Sbjct: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 180
Query: 181 FSKERSSSLEGSPDEFSNDFGQSLPNEKQTSGILSDHQQSQFCKSTGESAQTSQH 235
FSKERSSSLEGSPDEFSNDFGQSLPNEKQTSGILSDHQQSQFCKSTGESAQTSQH
Sbjct: 181 FSKERSSSLEGSPDEFSNDFGQSLPNEKQTSGILSDHQQSQFCKSTGESAQTSQH 235
>gi|122056476 caspase 8 isoform G precursor [Homo sapiens]
Length = 538
Score = 382 bits (980), Expect = e-106
Identities = 198/198 (100%), Positives = 198/198 (100%)
Query: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS
Sbjct: 60 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 119
Query: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF
Sbjct: 120 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 179
Query: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 180
KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE
Sbjct: 180 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 239
Query: 181 FSKERSSSLEGSPDEFSN 198
FSKERSSSLEGSPDEFSN
Sbjct: 240 FSKERSSSLEGSPDEFSN 257
>gi|15718706 caspase 8 isoform B precursor [Homo sapiens]
Length = 479
Score = 382 bits (980), Expect = e-106
Identities = 198/198 (100%), Positives = 198/198 (100%)
Query: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS
Sbjct: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
Query: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF
Sbjct: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
Query: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 180
KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE
Sbjct: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 180
Query: 181 FSKERSSSLEGSPDEFSN 198
FSKERSSSLEGSPDEFSN
Sbjct: 181 FSKERSSSLEGSPDEFSN 198
>gi|122056474 caspase 8 isoform C precursor [Homo sapiens]
Length = 464
Score = 353 bits (905), Expect = 9e-98
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS
Sbjct: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
Query: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF
Sbjct: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
Query: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 180
KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE
Sbjct: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 180
Query: 181 FSK 183
FSK
Sbjct: 181 FSK 183
>gi|15718708 caspase 8 isoform C precursor [Homo sapiens]
Length = 464
Score = 353 bits (905), Expect = 9e-98
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS
Sbjct: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
Query: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF
Sbjct: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
Query: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 180
KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE
Sbjct: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEE 180
Query: 181 FSK 183
FSK
Sbjct: 181 FSK 183
>gi|15718704 caspase 8 isoform A precursor [Homo sapiens]
Length = 496
Score = 336 bits (862), Expect = 9e-93
Identities = 183/215 (85%), Positives = 183/215 (85%), Gaps = 32/215 (14%)
Query: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS
Sbjct: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
Query: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAY------------------- 101
FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAY
Sbjct: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRFHFCRMSWAEANSQCQTQ 120
Query: 102 -------------RVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNLLDIFIEMEK 148
RVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNLLDIFIEMEK
Sbjct: 121 SVPFWRRVDHLLIRVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNLLDIFIEMEK 180
Query: 149 RVILGEGKLDILKRVCAQINKSLLKIINDYEEFSK 183
RVILGEGKLDILKRVCAQINKSLLKIINDYEEFSK
Sbjct: 181 RVILGEGKLDILKRVCAQINKSLLKIINDYEEFSK 215
>gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens]
Length = 522
Score = 87.8 bits (216), Expect = 7e-18
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
+ F L I L +D+ +LKFL + +P +K E A +F+ L + +L E +
Sbjct: 18 VSFREKLLIIDSNLGVQDVENLKFLCIGLVPNKKLEKSSSASDVFEHLLAEDLLSEEDPF 77
Query: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
FL ELL+ I + LL +LN KEE+ER L P R ++S +R +LY++SE + L+
Sbjct: 78 FLAELLYIIRQKKLL-QHLNCTKEEVERLL--PTRQRVSLFRNLLYELSEGIDSENLKDM 134
Query: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYE 179
FLL++ + K +M L +EK+ + E L L+ +C + LL+ I Y+
Sbjct: 135 IFLLKDSLPK----TEMTSLSFLAFLEKQGKIDEDNLTCLEDLCKTVVPKLLRNIEKYK 189
>gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens]
Length = 521
Score = 87.8 bits (216), Expect = 7e-18
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
+ F L I L +D+ +LKFL + +P +K E A +F+ L + +L E +
Sbjct: 18 VSFREKLLIIDSNLGVQDVENLKFLCIGLVPNKKLEKSSSASDVFEHLLAEDLLSEEDPF 77
Query: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
FL ELL+ I + LL +LN KEE+ER L P R ++S +R +LY++SE + L+
Sbjct: 78 FLAELLYIIRQKKLL-QHLNCTKEEVERLL--PTRQRVSLFRNLLYELSEGIDSENLKDM 134
Query: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYE 179
FLL++ + K +M L +EK+ + E L L+ +C + LL+ I Y+
Sbjct: 135 IFLLKDSLPK----TEMTSLSFLAFLEKQGKIDEDNLTCLEDLCKTVVPKLLRNIEKYK 189
>gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens]
Length = 479
Score = 87.8 bits (216), Expect = 7e-18
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 1 MDFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLS 60
+ F L I L +D+ +LKFL + +P +K E A +F+ L + +L E +
Sbjct: 18 VSFREKLLIIDSNLGVQDVENLKFLCIGLVPNKKLEKSSSASDVFEHLLAEDLLSEEDPF 77
Query: 61 FLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSF 120
FL ELL+ I + LL +LN KEE+ER L P R ++S +R +LY++SE + L+
Sbjct: 78 FLAELLYIIRQKKLL-QHLNCTKEEVERLL--PTRQRVSLFRNLLYELSEGIDSENLKDM 134
Query: 121 KFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYE 179
FLL++ + K +M L +EK+ + E L L+ +C + LL+ I Y+
Sbjct: 135 IFLLKDSLPK----TEMTSLSFLAFLEKQGKIDEDNLTCLEDLCKTVVPKLLRNIEKYK 189
>gi|187608585 CASP8 and FADD-like apoptosis regulator isoform 2
[Homo sapiens]
Length = 221
Score = 72.0 bits (175), Expect = 4e-13
Identities = 51/193 (26%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 7 LYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELL 66
++ + E LD+++ L FL D ++D L + L+E+ L +L+ ELL
Sbjct: 6 IHQVEEALDTDEKEMLLFLCRDVAIDVVPPNVRDLLDI---LRERGKLSVGDLA---ELL 59
Query: 67 FRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQE 126
+R+ R DLL L ++ +E L +S YRV++ +I E++ +S++ S FL+++
Sbjct: 60 YRVRRFDLLKRILKMDRKAVETHLLRNPHL-VSDYRVLMAEIGEDLDKSDVSSLIFLMKD 118
Query: 127 EISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKI-INDYEEFSKER 185
+ + K+ + + LD+ +E+EK ++ +LD+L++ I++ LK I Y++
Sbjct: 119 YMGRGKISKEKSFLDLVVELEKLNLVAPDQLDLLEKCLKNIHRIDLKTKIQKYKQ----- 173
Query: 186 SSSLEGSPDEFSN 198
S++G+ + N
Sbjct: 174 --SVQGAGTSYRN 184
Score = 45.8 bits (107), Expect = 3e-05
Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 61
D+ + +IGE LD D++SL FL DY+ + K K L L L++ ++ L
Sbjct: 92 DYRVLMAEIGEDLDKSDVSSLIFLMKDYMGRGKISKEKSFLDLVVELEKLNLVAPDQLDL 151
Query: 62 LKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFK 121
L++ L I+R+D L T+ ++ ++ +Q G ++YR +L ++ + +F+
Sbjct: 152 LEKCLKNIHRID-----LKTKIQKYKQSVQGAG----TSYRNVLQAAIQKSLKDPSNNFR 202
Query: 122 FL 123
+
Sbjct: 203 MI 204
>gi|187608577 CASP8 and FADD-like apoptosis regulator isoform 1
[Homo sapiens]
Length = 480
Score = 72.0 bits (175), Expect = 4e-13
Identities = 51/193 (26%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 7 LYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELL 66
++ + E LD+++ L FL D ++D L + L+E+ L +L+ ELL
Sbjct: 6 IHQVEEALDTDEKEMLLFLCRDVAIDVVPPNVRDLLDI---LRERGKLSVGDLA---ELL 59
Query: 67 FRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQE 126
+R+ R DLL L ++ +E L +S YRV++ +I E++ +S++ S FL+++
Sbjct: 60 YRVRRFDLLKRILKMDRKAVETHLLRNPHL-VSDYRVLMAEIGEDLDKSDVSSLIFLMKD 118
Query: 127 EISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKI-INDYEEFSKER 185
+ + K+ + + LD+ +E+EK ++ +LD+L++ I++ LK I Y++
Sbjct: 119 YMGRGKISKEKSFLDLVVELEKLNLVAPDQLDLLEKCLKNIHRIDLKTKIQKYKQ----- 173
Query: 186 SSSLEGSPDEFSN 198
S++G+ + N
Sbjct: 174 --SVQGAGTSYRN 184
Score = 45.1 bits (105), Expect = 5e-05
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 2 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 61
D+ + +IGE LD D++SL FL DY+ + K K L L L++ ++ L
Sbjct: 92 DYRVLMAEIGEDLDKSDVSSLIFLMKDYMGRGKISKEKSFLDLVVELEKLNLVAPDQLDL 151
Query: 62 LKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFK 121
L++ L I+R+D L T+ ++ ++ +Q G ++YR +L ++ + +F+
Sbjct: 152 LEKCLKNIHRID-----LKTKIQKYKQSVQGAG----TSYRNVLQAAIQKSLKDPSNNFR 202
>gi|187608571 CASP8 and FADD-like apoptosis regulator isoform 1
[Homo sapiens]
Length = 480
Score = 72.0 bits (175), Expect = 4e-13
Identities = 51/193 (26%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 7 LYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELL 66
++ + E LD+++ L FL D ++D L + L+E+ L +L+ ELL
Sbjct: 6 IHQVEEALDTDEKEMLLFLCRDVAIDVVPPNVRDLLDI---LRERGKLSVGDLA---ELL 59
Query: 67 FRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQE 126
+R+ R DLL L ++ +E L +S YRV++ +I E++ +S++ S FL+++
Sbjct: 60 YRVRRFDLLKRILKMDRKAVETHLLRNPHL-VSDYRVLMAEIGEDLDKSDVSSLIFLMKD 118
Query: 127 EISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKI-INDYEEFSKER 185
+ + K+ + + LD+ +E+EK ++ +LD+L++ I++ LK I Y++
Sbjct: 119 YMGRGKISKEKSFLDLVVELEKLNLVAPDQLDLLEKCLKNIHRIDLKTKIQKYKQ----- 173
Query: 186 SSSLEGSPDEFSN 198
S++G+ + N
Sbjct: 174 --SVQGAGTSYRN 184
Score = 45.1 bits (105), Expect = 5e-05
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 2 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 61
D+ + +IGE LD D++SL FL DY+ + K K L L L++ ++ L
Sbjct: 92 DYRVLMAEIGEDLDKSDVSSLIFLMKDYMGRGKISKEKSFLDLVVELEKLNLVAPDQLDL 151
Query: 62 LKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFK 121
L++ L I+R+D L T+ ++ ++ +Q G ++YR +L ++ + +F+
Sbjct: 152 LEKCLKNIHRID-----LKTKIQKYKQSVQGAG----TSYRNVLQAAIQKSLKDPSNNFR 202
>gi|4505229 Fas-associated via death domain [Homo sapiens]
Length = 208
Score = 49.3 bits (116), Expect = 3e-06
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 7 LYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELL 66
L+ + L S +L LKFL L + +RK E ++ L LF L E+ LE + L+ELL
Sbjct: 8 LHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELLRELL 67
Query: 67 FRINRLDLL 75
+ R DLL
Sbjct: 68 ASLRRHDLL 76
Score = 42.7 bits (99), Expect = 3e-04
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 101 YRVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDIL 160
+ V+L+ +S +S SEL KFL + K KL+ + LD+F + ++ L G ++L
Sbjct: 4 FLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELL 63
Query: 161 KRVCAQINK-SLLKIINDYE 179
+ + A + + LL+ ++D+E
Sbjct: 64 RELLASLRRHDLLRRVDDFE 83
>gi|58530842 desmoplakin isoform II [Homo sapiens]
Length = 2272
Score = 42.0 bits (97), Expect = 5e-04
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 45 FQRLQEKRMLEESNLSF--------LKELLFRINRLDLLITYLNTRKEEMERELQTPGRA 96
+ +LQ+ R E+ NL + +KE + I RL +L+ TRK E E EL
Sbjct: 1139 YDQLQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGTRKREYENELAKASN- 1197
Query: 97 QISAYRVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNLLDIFIEMEKRVILG--- 153
+I + Q+ +E S L K L Q++ +L+D++N +E E RV
Sbjct: 1198 RIQESKNQCTQVVQE-RESLLVKIKVLEQDKARLQRLEDELNRAKSTLEAETRVKQRLEC 1256
Query: 154 -----EGKLDILKRVCAQINKSLLKIINDYEEFSKERSS 187
+ L+ K ++ +++ KI ++ E+ +E++S
Sbjct: 1257 EKQQIQNDLNQWKTQYSRKEEAIRKIESEREKSEREKNS 1295
>gi|4505705 phosphoprotein enriched in astrocytes 15 [Homo sapiens]
Length = 130
Score = 41.6 bits (96), Expect = 6e-04
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 2 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 61
++ L D+ + EDL LK + IP K E I F L+ L++ NLS+
Sbjct: 3 EYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSY 62
Query: 62 LKELLFRINRLDLLITYLNTR------KEEMERELQTPGRAQISAYRVMLYQISEE 111
++ + R DLL ++ R EE E + + Y+ ++ Q SEE
Sbjct: 63 IEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEE 118
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 38.1 bits (87), Expect = 0.007
Identities = 59/248 (23%), Positives = 98/248 (39%), Gaps = 32/248 (12%)
Query: 4 SRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRL----QEKRMLEESNL 59
+RNL QL+ E L L Q+K I + +++ +E + + S+L
Sbjct: 749 ARNLNTSALQLEHEHLIKLN--------QKKDMEIAELKKNIEQMDTDHKETKDVLSSSL 800
Query: 60 SFLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRS--EL 117
K+L IN+ ++ I L R +++ EL +Q +L Q EE RS +
Sbjct: 801 EEQKQLTQLINKKEIFIEKLKERSSKLQEELDK--YSQALRKNEILRQTIEEKDRSLGSM 858
Query: 118 RSFKFLLQEEISKCKLDD-------DMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKS 170
+ LQEE+ + + + D LD E+ V +L+ +K + K
Sbjct: 859 KEENNHLQEELERLREEQSRTAPVADPKTLDSVTELASEV----SQLNTIKEHLEEEIKH 914
Query: 171 LLKIINDYEEFSKERSSSLEGSP---DEFSNDFGQSLPNEKQTSGILSDHQQSQFCKSTG 227
KII D + + SL+ DEF Q N T L ++ + + T
Sbjct: 915 HQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQHEQM--NATHTQLFLEKDEEIKSLQKTI 972
Query: 228 ESAQTSQH 235
E +T H
Sbjct: 973 EQIKTQLH 980
Score = 28.5 bits (62), Expect = 5.2
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 82 RKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNLLD 141
R EE+E LQ G I +Y++ + + ++ + + E + K+ D
Sbjct: 264 RIEELENLLQQGGSGVIETDLSKIYEMQKTIQVLQIEKVESTKKMEQLEDKIKD------ 317
Query: 142 IFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEEFSKERS 186
+ K++ E DIL+R Q+N +I+ + E E S
Sbjct: 318 ----INKKLSSAENDRDILRREQEQLNVEKRQIMEECENLKLECS 358
>gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo
sapiens]
Length = 1638
Score = 36.2 bits (82), Expect = 0.025
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 16 SEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRINRLDLL 75
S+DL +K L + RKQ + ++ L Q+L+E + + L + +I +
Sbjct: 484 SKDL-EIKNLKEEIEKLRKQ--VTESSHLEQQLEEANAVRQE----LDDAFRQIKAYEKQ 536
Query: 76 ITYLNTRKEEMER-ELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQEEISK---- 130
I L +E++ + E+ T A ++ L + SE S+ + L Q++IS
Sbjct: 537 IKTLQQEREDLNKLEVHTEALAAEASKDRKLREQSEHYSKQLENELEGLKQKQISYSPGV 596
Query: 131 CKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYE----------- 179
C ++ + + ++EK+ I E +L + + A K+L K ++D E
Sbjct: 597 CSIEHQQEITKLKTDLEKKSIFYEEELSKREGIHANEIKNLKKELHDSEGQQLALNKEIM 656
Query: 180 ----EFSKERSSSLEGSPDEFSNDFGQSLPNEK 208
+ K R S + +EF ++F Q EK
Sbjct: 657 ILKDKLEKTRRES-QSEREEFESEFKQQYEREK 688
>gi|50980301 myosin phosphatase-Rho interacting protein isoform 2
[Homo sapiens]
Length = 1025
Score = 34.3 bits (77), Expect = 0.095
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 35 QEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRINRLDLLITYLNTRKEEMERELQTPG 94
Q+ I+D QR EK + EE + +E I+ ++ + N +EEMEREL+
Sbjct: 736 QKKIEDLQRQHQRELEK-LREEKDRLLAEETAATISAIEAM---KNAHREEMERELEKSQ 791
Query: 95 RAQISA----YRVMLYQISEEVSRSELRSFKFLLQEEISKC 131
R+QIS+ + Q EE+ +S R + L ++ KC
Sbjct: 792 RSQISSVNSDVEALRRQYLEEL-QSVQRELEVLSEQYSQKC 831
>gi|50980307 myosin phosphatase-Rho interacting protein isoform 1
[Homo sapiens]
Length = 1038
Score = 34.3 bits (77), Expect = 0.095
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 35 QEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRINRLDLLITYLNTRKEEMERELQTPG 94
Q+ I+D QR EK + EE + +E I+ ++ + N +EEMEREL+
Sbjct: 736 QKKIEDLQRQHQRELEK-LREEKDRLLAEETAATISAIEAM---KNAHREEMERELEKSQ 791
Query: 95 RAQISA----YRVMLYQISEEVSRSELRSFKFLLQEEISKC 131
R+QIS+ + Q EE+ +S R + L ++ KC
Sbjct: 792 RSQISSVNSDVEALRRQYLEEL-QSVQRELEVLSEQYSQKC 831
>gi|45439327 periplakin [Homo sapiens]
Length = 1756
Score = 33.9 bits (76), Expect = 0.12
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 62 LKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVM-----LYQISEEVSRSE 116
+ +L + RL T L + EE+ERE Q A+ R+ L Q E
Sbjct: 1382 IDKLRAELRRLQRRRTELERQLEELERERQARREAEREVQRLQQRLAALEQEEAEAREKV 1441
Query: 117 LRSFKFLLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLK 173
+ K +LQ++ + + + + L + E +R +L EG+L+ L+R A + K+ +K
Sbjct: 1442 THTQKVVLQQDPQQAR-EHALLRLQLEEEQHRRQLL-EGELETLRRKLAALEKAEVK 1496
>gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 868
Score = 33.1 bits (74), Expect = 0.21
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 41/238 (17%)
Query: 9 DIGEQLDSEDLASLKFL-SLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLF 67
+I QL E L K L SL + Q++++ ++ L Q+++EK + E
Sbjct: 369 EIKSQLKHETLELEKELCSLRFAIQQEKKKRRNVEELHQKVREKLRITEEQY-------- 420
Query: 68 RINRLDLLITY-LNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQE 126
R++ +T + + E EL+T G Q+SE + +L L+Q+
Sbjct: 421 ---RIEADVTKPIKPALKSAEVELKTGGNNS--------NQVSETDEKEDLLHENRLMQD 469
Query: 127 EISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEEFSKERS 186
EI++ +L+ D +EK+ + +I+KR + K+L + E S
Sbjct: 470 EIARLRLEKDTIKNQ---NLEKKYL---KDFEIVKRKHEDLQKALKRNEETLAETIACYS 523
Query: 187 SSLEGSPDEFS---------NDFGQSLPNEKQT-----SGILSDHQQSQFCKSTGESA 230
L DE + + GQ L E Q+ + L DH QS K E A
Sbjct: 524 GQLAALTDENTTLRSKLEKQRESGQRLETEMQSYRCRLNAALCDHDQSHSSKRDQELA 581
>gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 1430
Score = 33.1 bits (74), Expect = 0.21
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 41/238 (17%)
Query: 9 DIGEQLDSEDLASLKFL-SLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLF 67
+I QL E L K L SL + Q++++ ++ L Q+++EK + E
Sbjct: 931 EIKSQLKHETLELEKELCSLRFAIQQEKKKRRNVEELHQKVREKLRITEEQY-------- 982
Query: 68 RINRLDLLITY-LNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQE 126
R++ +T + + E EL+T G Q+SE + +L L+Q+
Sbjct: 983 ---RIEADVTKPIKPALKSAEVELKTGGNNS--------NQVSETDEKEDLLHENRLMQD 1031
Query: 127 EISKCKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEEFSKERS 186
EI++ +L+ D +EK+ + +I+KR + K+L + E S
Sbjct: 1032 EIARLRLEKDTIKNQ---NLEKKYL---KDFEIVKRKHEDLQKALKRNEETLAETIACYS 1085
Query: 187 SSLEGSPDEFS---------NDFGQSLPNEKQT-----SGILSDHQQSQFCKSTGESA 230
L DE + + GQ L E Q+ + L DH QS K E A
Sbjct: 1086 GQLAALTDENTTLRSKLEKQRESGQRLETEMQSYRCRLNAALCDHDQSHSSKRDQELA 1143
>gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo
sapiens]
Length = 1719
Score = 33.1 bits (74), Expect = 0.21
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 81 TRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQEEISK----CKLDDD 136
T + + E E+ T A ++ L + SE S+ + L Q++IS C ++
Sbjct: 624 TERAKKELEVHTEALAAEASKDRKLREQSEHYSKQLENELEGLKQKQISYSPGVCSIEHQ 683
Query: 137 MNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYE---------------EF 181
+ + ++EK+ I E +L + + A K+L K ++D E +
Sbjct: 684 QEITKLKTDLEKKSIFYEEELSKREGIHANEIKNLKKELHDSEGQQLALNKEIMILKDKL 743
Query: 182 SKERSSSLEGSPDEFSNDFGQSLPNEK 208
K R S + +EF ++F Q EK
Sbjct: 744 EKTRRES-QSEREEFESEFKQQYEREK 769
>gi|148596998 coiled-coil domain containing 122 [Homo sapiens]
Length = 273
Score = 33.1 bits (74), Expect = 0.21
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 19/117 (16%)
Query: 56 ESNLSFLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRS 115
ES SF+ EL + + + L T KEE+ ++LQ PG +I+ Q+ E++ +
Sbjct: 143 ESKWSFMTELHEKRD----FVKKLKTMKEELMQDLQNPGGNRIT-------QVQEDI--T 189
Query: 116 ELRSFKFLLQEEI--SKCKLDDDMNLLDIFIEMEKRVILGEGKLD-ILKRVCAQINK 169
L+ ++E I C L+++ + ++ K + + + D ILKR+ Q+NK
Sbjct: 190 NLKDKIITVKESIIEKTCFLEEEKKTHE---KLRKEIEVQHKRYDAILKRLHCQVNK 243
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 32.7 bits (73), Expect = 0.28
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 15 DSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKR-MLEE--SNLSFLKELLFRINR 71
D EDL S K D + + E K L Q+++E R LEE L ++ R+
Sbjct: 1512 DMEDLMSSK----DDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLE- 1566
Query: 72 LDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISE-EVSRSELRSFKFLLQEEISK 130
+ K + ER+LQT R+++ Q+ E E + R + L SK
Sbjct: 1567 -----VNMQAMKAQFERDLQTRDEQNEEKKRLLIKQVRELEAELEDERKQRAL--AVASK 1619
Query: 131 CKLDDDMNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEEFSKERSSSLE 190
K++ D+ L E +++ + ++ K L K+ +++ +E +
Sbjct: 1620 KKMEIDLKDL-------------EAQIEAANKARDEVIKQLRKLQAQMKDYQRELEEA-R 1665
Query: 191 GSPDEFSNDFGQSLPNEKQTSGILSDHQQSQFCKSTGESAQ 231
S DE F QS +EK+ + ++ Q Q ++ E A+
Sbjct: 1666 ASRDEI---FAQSKESEKKLKSLEAEILQLQEELASSERAR 1703
Score = 31.6 bits (70), Expect = 0.62
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 6 NLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKEL 65
++ D+ EQLD E+ A K + K + +++ ++L LE+ N F+KE
Sbjct: 951 HIQDLEEQLDEEEGARQKLQLEKVTAEAKIKKMEEEILL---------LEDQNSKFIKEK 1001
Query: 66 LFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQ 125
+R+ + L +EE + L Q VM+ + E + + E K +
Sbjct: 1002 KLMEDRIAECSSQL-AEEEEKAKNLAKIRNKQ----EVMISDLEERLKKEE----KTRQE 1052
Query: 126 EEISKCKLD-DDMNLLDIFIEMEKRVILGEGKLDILKR 162
E +K KLD + +L D E++ ++ E KL + K+
Sbjct: 1053 LEKAKRKLDGETTDLQDQIAELQAQI--DELKLQLAKK 1088
Score = 28.5 bits (62), Expect = 5.2
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 56 ESNLSFLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRS 115
ES L +ELL R L ++ + EE + LQ Q EE +R
Sbjct: 1314 ESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQ-------------QEEEEEARK 1360
Query: 116 ELRSFKFLLQEEIS--KCKLDDDMNLLDIFIEMEKRVI 151
L LQ +++ K K+DDD+ ++ E +K+++
Sbjct: 1361 NLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLL 1398
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 32.7 bits (73), Expect = 0.28
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 32 QRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRINRLDLLITYLNTRKEEMERELQ 91
+++QE AL Q+LQ++R L + L L+ L L K E+ER
Sbjct: 1820 RQRQEGEAAALNTVQKLQDERRLLQERLGSLQRAL----------AQLEAEKREVER--- 1866
Query: 92 TPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNLLDIFIEMEKRVI 151
++ RV L + ++V R +LRS + ++ K +LD + ++ + +R I
Sbjct: 1867 --SALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQI 1924
Score = 28.9 bits (63), Expect = 4.0
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 12/172 (6%)
Query: 28 DYIPQRKQEPIKDALMLFQRLQEK-RMLE--ESNLSFLKELLFRI----NRLDLLITYLN 80
D + + +++ ++D + + L+ R LE E S L + L + +R L L
Sbjct: 641 DRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQ 700
Query: 81 TRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNLL 140
K E+ L ++ M +EE S + S L E +++ KL D+N L
Sbjct: 701 AEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKL--DLNRL 758
Query: 141 DIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEEFSKERSSSLEGS 192
+E EK + G + + A+ + L+ + +E +++ LEGS
Sbjct: 759 VAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQ---GLEGS 807
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 32.3 bits (72), Expect = 0.36
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 45 FQRLQEKRMLEESNLSF--------LKELLFRINRLDLLITYLNTRKEEMEREL---QTP 93
+ +LQ+ R E+ NL + +KE + I RL +L+ TRK E E EL +
Sbjct: 1139 YDQLQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGTRKREYENELAKVRNH 1198
Query: 94 GRAQISAYRVMLYQISEEVSRSELRSFKFLLQEEISKCKLDDDMNL 139
++S R Y+ ++++ ++ EIS K DD NL
Sbjct: 1199 YNEEMSNLR-NKYETEINITKTTIK--------EISMQKEDDSKNL 1235
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 32.0 bits (71), Expect = 0.47
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 58 NLSFLKELLFRINRLDLLITYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSEL 117
+++F L + +L L YL+ K +LQ QI AY ++ + + +E
Sbjct: 333 DMNFRVHLQYEFTKLGL-DEYLDKLKHTESDKLQV----QIQAYLDNVFDVGALLEDAET 387
Query: 118 RSFKFLLQEEISKC------KLDDDMN-LLDIFIEMEKRVILGEGKLDILKRVCAQIN-- 168
++ EE+ + KL D N + +E+EK+++ +LD+++ + N
Sbjct: 388 KNAALERVEELEENISHLSEKLQDTENEAMSKIVELEKQLMQRNKELDVVREIYKDANTQ 447
Query: 169 -KSLLKIINDYEEFSKERSSSLE 190
+L K++ + EE + +R S+LE
Sbjct: 448 VHTLRKMVKEKEE-AIQRQSTLE 469
>gi|150010604 kinesin family member 4B [Homo sapiens]
Length = 1234
Score = 31.6 bits (70), Expect = 0.62
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 27/115 (23%)
Query: 44 LFQRLQEKRMLEESNLSFLKELLFR-------------------INRLDLLITYLNTRKE 84
L Q K ++E +N LKE L R I L+L + L KE
Sbjct: 517 LHQAQMSKEVVELNNALALKEALVRKMTQNDNQLQPIQFQYQDNIKNLELEVINLQKEKE 576
Query: 85 EMERELQTP----GRAQISAYRVMLYQISEEVSRSELRSFKFLLQEEISKCKLDD 135
E+ RELQT +A++S +R L Q E ++ K L E+ KL +
Sbjct: 577 ELVRELQTAKKNVNQAKLSEHRHKLLQELE----GQIADLKKKLNEQSKLLKLKE 627
>gi|89353287 death effector domain-containing protein [Homo
sapiens]
Length = 318
Score = 31.6 bits (70), Expect = 0.62
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 10 IGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRI 69
+G L D+ L FL +D I ++ I++ L+ + +ESN + +LL I
Sbjct: 33 VGTHLTHRDVRVLSFLFVDVIDDHERGLIRNGRDFLLALERQGRCDESNFRQVLQLLRII 92
Query: 70 NRLDLL 75
R DLL
Sbjct: 93 TRHDLL 98
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,882,914
Number of Sequences: 37866
Number of extensions: 330920
Number of successful extensions: 1307
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 1234
Number of HSP's gapped (non-prelim): 105
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.