CCDC122 4546

Name: CCDC122	Sequence: fasta or formatted (273aa)		NCBI GI: 148596998
Description: coiled-coil domain containing 122		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 15 2 C cysteine 1.5 4 1 D aspartate 4.8 13 1 E glutamate 13.6 37 3 F phenylalanine 2.6 7 1 G glycine 1.8 5 2 H histidine 3.3 9 1 I isoleucine 7.0 19 2 K lysine 13.9 38 2 L leucine 8.1 22 1 M methionine 2.2 6 1 N asparagine 5.5 15 1 P proline 0.7 2 1 Q glutamine 8.4 23 3 R arginine 3.7 10 2 S serine 5.9 16 2 T threonine 5.1 14 1 V valine 3.7 10 1 W tryptophan 1.1 3 1 Y tyrosine 1.8 5 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 122 SMC1A 0.091 structural maintenance of chromosomes 1A MYH9 0.068 myosin, heavy polypeptide 9, non-muscle EEA1 0.064 early endosome antigen 1, 162kD CCDC88A 0.062 coiled-coil domain containing 88A isoform 2 MYH10 0.062 myosin, heavy polypeptide 10, non-muscle CCDC88A 0.062 coiled-coil domain containing 88A isoform 1 DSP 0.060 desmoplakin isoform II MYH11 0.060 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.060 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.060 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.060 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... DSP 0.056 desmoplakin isoform I SYCP1 0.056 synaptonemal complex protein 1 MYH2 0.056 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.056 myosin, heavy chain 2, skeletal muscle, adult [Homo... ERC1 0.054 RAB6-interacting protein 2 isoform delta CCDC30 0.054 coiled-coil domain containing 30 C10orf118 0.054 CTCL tumor antigen L14-2 HOOK3 0.054 golgi-associated microtubule-binding protein HOOK3 [... CTAGE5 0.052 CTAGE family, member 5 isoform 3 CTAGE5 0.052 CTAGE family, member 5 isoform 1 CTAGE5 0.052 CTAGE family, member 5 isoform 4 CTAGE5 0.052 CTAGE family, member 5 isoform 2 CCDC147 0.052 coiled-coil domain containing 147 CIT 0.050 citron MYH1 0.050 myosin, heavy chain 1, skeletal muscle, adult [Homo... GOLGA4 0.050 golgi autoantigen, golgin subfamily a, 4 NDE1 0.048 nuclear distribution gene E homolog 1 NDE1 0.048 nuclear distribution gene E homolog 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.