CXXC1 5877

Name: CXXC1	Sequence: fasta or formatted (660aa)		NCBI GI: 156142182
Description: CXXC finger 1 (PHD domain) isoform 1		Referenced in: Histones, Related Proteins, and Modifying Enzymes PHD Finger Proteins
Other entries for this name: alt prot [656aa] CXXC finger 1 (PHD domain) isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 40 2 C cysteine 5.0 33 1 D aspartate 7.0 46 2 E glutamate 8.9 59 2 F phenylalanine 2.3 15 1 G glycine 5.2 34 3 H histidine 2.9 19 2 I isoleucine 3.3 22 2 K lysine 7.0 46 2 L leucine 6.7 44 2 M methionine 2.1 14 1 N asparagine 2.1 14 1 P proline 7.7 51 2 Q glutamine 6.1 40 6 R arginine 10.9 72 2 S serine 6.4 42 2 T threonine 3.3 22 2 V valine 3.6 24 1 W tryptophan 1.1 7 1 Y tyrosine 2.4 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CXXC finger 1 (PHD domain) isoform 1 CXXC1 0.990 CXXC finger 1 (PHD domain) isoform 2 MBD1 0.040 methyl-CpG binding domain protein 1 isoform PCM1 [Ho... MBD1 0.040 methyl-CpG binding domain protein 1 isoform 1 MBD1 0.037 methyl-CpG binding domain protein 1 isoform 2 FBXL19 0.031 F-box and leucine-rich repeat protein 19 KDM2B 0.031 F-box and leucine-rich repeat protein 10 isoform a [... KDM2B 0.031 F-box and leucine-rich repeat protein 10 isoform b [... DIDO1 0.030 death inducer-obliterator 1 isoform c DIDO1 0.030 death inducer-obliterator 1 isoform b DIDO1 0.030 death inducer-obliterator 1 isoform a DIDO1 0.030 death inducer-obliterator 1 isoform a PHF2 0.029 PHD finger protein 2 JHDM1D 0.029 jumonji C domain containing histone demethylase 1 ho... MLL 0.028 myeloid/lymphoid or mixed-lineage leukemia protein [... PHF8 0.027 PHD finger protein 8 BPTF 0.026 bromodomain PHD finger transcription factor isoform ... BPTF 0.026 bromodomain PHD finger transcription factor isoform ... KDM2A 0.026 F-box and leucine-rich repeat protein 11 MLL4 0.024 myeloid/lymphoid or mixed-lineage leukemia 4 PHF3 0.023 PHD finger protein 3 DNMT1 0.020 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... DNMT1 0.020 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... TAF3 0.020 RNA polymerase II transcription factor TAFII140 [Ho... ING1 0.019 inhibitor of growth family, member 1 isoform A [Homo... ING1 0.019 inhibitor of growth family, member 1 isoform B [Homo... ING1 0.019 inhibitor of growth family, member 1 isoform C [Homo... ING1 0.019 inhibitor of growth family, member 1 isoform D [Homo... ING2 0.018 inhibitor of growth family, member 2 TET1 0.018 CXXC finger 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.