Guide to the Human Genome
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Name: DIDO1 Sequence: fasta or formatted (2240aa) NCBI GI: 71044479
Description:

death inducer-obliterator 1 isoform c

Referenced in:

PHD Finger Proteins

Other entries for this name:
alt prot [562aa] death inducer-obliterator 1 isoform a
alt prot [562aa] death inducer-obliterator 1 isoform a
alt prot [1189aa] death inducer-obliterator 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6        215           4
 C cysteine            1.3         30           2
 D aspartate           5.6        126           2
 E glutamate           8.9        199           4
 F phenylalanine       2.7         60           1
 G glycine             7.4        166           2
 H histidine           1.7         39           1
 I isoleucine          2.4         53           2
 K lysine              6.6        148           3
 L leucine             5.7        128           2
 M methionine          1.2         27           1
 N asparagine          2.2         50           3
 P proline            11.7        261           6
 Q glutamine           4.7        106           3
 R arginine            8.2        183           3
 S serine              9.6        215           3
 T threonine           4.0         90           2
 V valine              4.4         99           3
 W tryptophan          0.8         18           1
 Y tyrosine            1.2         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   death inducer-obliterator 1 isoform c 
DIDO1                 0.519   death inducer-obliterator 1 isoform b 
DIDO1                 0.233   death inducer-obliterator 1 isoform a 
DIDO1                 0.233   death inducer-obliterator 1 isoform a 
PHF3                  0.046   PHD finger protein 3 
RBM25                 0.023   RNA binding motif protein 25 
ZC3H13                0.020   zinc finger CCCH-type containing 13 
LOC100131202          0.019   PREDICTED: hypothetical protein 
LOC100131202          0.019   PREDICTED: hypothetical protein 
LOC100286959          0.018   PREDICTED: hypothetical protein XP_002343921 
SPOCD1                0.018   SPOC domain containing 1 
LOC100288837          0.018   PREDICTED: hypothetical protein XP_002343931, parti...
CHERP                 0.018   calcium homeostasis endoplasmic reticulum protein [...
PRB2                  0.017   proline-rich protein BstNI subfamily 2 
WDR33                 0.017   WD repeat domain 33 isoform 1 
LOC100134067          0.017   PREDICTED: hypothetical protein 
SFRS12                0.016   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.016   splicing factor, arginine/serine-rich 12 isoform b [...
PRB1                  0.015   proline-rich protein BstNI subfamily 1 isoform 1 pre...
RSRC2                 0.015   arginine/serine-rich coiled-coil 2 isoform a 
SFRS15                0.015   splicing factor, arginine/serine-rich 15 isoform 3 ...
CROP                  0.014   cisplatin resistance-associated overexpressed protei...
CROP                  0.014   cisplatin resistance-associated overexpressed protei...
SFRS15                0.014   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.014   splicing factor, arginine/serine-rich 15 isoform 1 [...
PRPF38B               0.013   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
LOC100170229          0.013   hypothetical protein LOC100170229 
RSRC2                 0.013   arginine/serine-rich coiled-coil 2 isoform b 
COL2A1                0.013   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.013   collagen, type II, alpha 1 isoform 2 precursor [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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