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Search of human proteins with 156105695
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156105695 PPAR-alpha interacting complex protein 285 isoform
2 [Homo sapiens]
(2080 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 4207 0.0
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 4195 0.0
gi|54792138 helicase with zinc finger domain [Homo sapiens] 272 2e-72
gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens] 184 8e-46
gi|14251207 MOV10-like 1 [Homo sapiens] 131 8e-30
gi|219521928 DIS3 mitotic control homolog (S. cerevisiae)-like i... 130 2e-29
gi|19115966 DIS3 mitotic control homolog (S. cerevisiae)-like is... 130 2e-29
gi|190014625 DIS3 mitotic control isoform b [Homo sapiens] 119 4e-26
gi|190014623 DIS3 mitotic control isoform a [Homo sapiens] 119 4e-26
gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sap... 117 9e-26
gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapi... 117 9e-26
gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens] 115 3e-25
gi|113722133 senataxin [Homo sapiens] 109 2e-23
gi|134288890 DIS3 mitotic control homolog (S. cerevisiae)-like 2... 102 4e-21
gi|122937299 DNA replication helicase 2 homolog [Homo sapiens] 90 2e-17
gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens] 79 5e-14
gi|38788372 aquarius [Homo sapiens] 59 4e-08
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 37 0.15
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 37 0.20
gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens] 36 0.45
gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens] 36 0.45
gi|19913396 smoothelin isoform b [Homo sapiens] 35 0.77
gi|19913394 smoothelin isoform c [Homo sapiens] 35 0.77
gi|19913398 smoothelin isoform a [Homo sapiens] 35 0.77
gi|115527120 nebulin [Homo sapiens] 34 1.3
gi|30795231 brain abundant, membrane attached signal protein 1 [... 34 1.7
gi|24308527 stereocilin [Homo sapiens] 34 1.7
gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo s... 33 2.2
gi|7657455 pescadillo homolog 1, containing BRCT domain [Homo sa... 33 2.2
gi|5031579 A-kinase anchor protein 8 [Homo sapiens] 33 2.2
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 4207 bits (10911), Expect = 0.0
Identities = 2080/2080 (100%), Positives = 2080/2080 (100%)
Query: 1 MSSSPSRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQA 60
MSSSPSRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQA
Sbjct: 1 MSSSPSRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQA 60
Query: 61 FRPPTRAELARHRVVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTR 120
FRPPTRAELARHRVVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTR
Sbjct: 61 FRPPTRAELARHRVVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTR 120
Query: 121 LVLAGDHMQVTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAI 180
LVLAGDHMQVTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAI
Sbjct: 121 LVLAGDHMQVTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAI 180
Query: 181 VSFISRHFYVAKGNPIHARGKVPPHPRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVE 240
VSFISRHFYVAKGNPIHARGKVPPHPRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVE
Sbjct: 181 VSFISRHFYVAKGNPIHARGKVPPHPRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVE 240
Query: 241 KVQEAYNTWPSCWGGREQRCICVVSHGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRV 300
KVQEAYNTWPSCWGGREQRCICVVSHGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRV
Sbjct: 241 KVQEAYNTWPSCWGGREQRCICVVSHGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRV 300
Query: 301 VVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWE 360
VVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWE
Sbjct: 301 VVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWE 360
Query: 361 SFIRECVERHSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQA 420
SFIRECVERHSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQA
Sbjct: 361 SFIRECVERHSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQA 420
Query: 421 AVVTAMVKAEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGV 480
AVVTAMVKAEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGV
Sbjct: 421 AVVTAMVKAEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGV 480
Query: 481 ESTEAEDAEADFWPWDGELNADDAILRELLDESQKVMVTVGEDGLLDTVARPESLQQARL 540
ESTEAEDAEADFWPWDGELNADDAILRELLDESQKVMVTVGEDGLLDTVARPESLQQARL
Sbjct: 481 ESTEAEDAEADFWPWDGELNADDAILRELLDESQKVMVTVGEDGLLDTVARPESLQQARL 540
Query: 541 YENLPPAALRKLLHAEPERYRHCSFVPETFERASAIPLDDASSGPIQVRGRLDCGMAFAG 600
YENLPPAALRKLLHAEPERYRHCSFVPETFERASAIPLDDASSGPIQVRGRLDCGMAFAG
Sbjct: 541 YENLPPAALRKLLHAEPERYRHCSFVPETFERASAIPLDDASSGPIQVRGRLDCGMAFAG 600
Query: 601 DEVLVQLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVA 660
DEVLVQLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVA
Sbjct: 601 DEVLVQLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVA 660
Query: 661 ELKDPSQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPE 720
ELKDPSQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPE
Sbjct: 661 ELKDPSQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPE 720
Query: 721 ASTWEQGLRILGLEYSLRVPPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQG 780
ASTWEQGLRILGLEYSLRVPPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQG
Sbjct: 721 ASTWEQGLRILGLEYSLRVPPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQG 780
Query: 781 ACNLDDALSVRDLGPRCEVAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPA 840
ACNLDDALSVRDLGPRCEVAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPA
Sbjct: 781 ACNLDDALSVRDLGPRCEVAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPA 840
Query: 841 SLCQDVLSLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHP 900
SLCQDVLSLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHP
Sbjct: 841 SLCQDVLSLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHP 900
Query: 901 GAGRELPARLDSVDACVVAACYFSRLLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYM 960
GAGRELPARLDSVDACVVAACYFSRLLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYM
Sbjct: 901 GAGRELPARLDSVDACVVAACYFSRLLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYM 960
Query: 961 IQFNRLVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGG 1020
IQFNRLVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGG
Sbjct: 961 IQFNRLVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGG 1020
Query: 1021 SPPDTRLHLLASLWKQVQFAARTQDYEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGR 1080
SPPDTRLHLLASLWKQVQFAARTQDYEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGR
Sbjct: 1021 SPPDTRLHLLASLWKQVQFAARTQDYEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGR 1080
Query: 1081 CARGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQA 1140
CARGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQA
Sbjct: 1081 CARGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQA 1140
Query: 1141 FSLQHALAQSYQRRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPC 1200
FSLQHALAQSYQRRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPC
Sbjct: 1141 FSLQHALAQSYQRRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPC 1200
Query: 1201 PVPYGSLQLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWK 1260
PVPYGSLQLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWK
Sbjct: 1201 PVPYGSLQLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWK 1260
Query: 1261 QLLELVELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGT 1320
QLLELVELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGT
Sbjct: 1261 QLLELVELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGT 1320
Query: 1321 SLQHGFLVPSPQLWTVAPGFSLCLEHVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFC 1380
SLQHGFLVPSPQLWTVAPGFSLCLEHVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFC
Sbjct: 1321 SLQHGFLVPSPQLWTVAPGFSLCLEHVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFC 1380
Query: 1381 ALESATGAVAENDSVTLQHLSVSWEASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLC 1440
ALESATGAVAENDSVTLQHLSVSWEASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLC
Sbjct: 1381 ALESATGAVAENDSVTLQHLSVSWEASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLC 1440
Query: 1441 IRLEGLPAPTASPRPGPSSLGPGLNVDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLF 1500
IRLEGLPAPTASPRPGPSSLGPGLNVDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLF
Sbjct: 1441 IRLEGLPAPTASPRPGPSSLGPGLNVDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLF 1500
Query: 1501 VHHMGMEKVPEEVLRPGTLFTVELLPKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQP 1560
VHHMGMEKVPEEVLRPGTLFTVELLPKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQP
Sbjct: 1501 VHHMGMEKVPEEVLRPGTLFTVELLPKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQP 1560
Query: 1561 LCRVIPSRFLERQTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVF 1620
LCRVIPSRFLERQTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVF
Sbjct: 1561 LCRVIPSRFLERQTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVF 1620
Query: 1621 WFHKSNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQA 1680
WFHKSNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQA
Sbjct: 1621 WFHKSNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQA 1680
Query: 1681 EASEFPVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGE 1740
EASEFPVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGE
Sbjct: 1681 EASEFPVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGE 1740
Query: 1741 LFSREDLVWYKKVLWEARKFELDRHEVILCTCSCAASASLKILDVRQILVDEAGMATEPE 1800
LFSREDLVWYKKVLWEARKFELDRHEVILCTCSCAASASLKILDVRQILVDEAGMATEPE
Sbjct: 1741 LFSREDLVWYKKVLWEARKFELDRHEVILCTCSCAASASLKILDVRQILVDEAGMATEPE 1800
Query: 1801 TLIPLVQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHE 1860
TLIPLVQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHE
Sbjct: 1801 TLIPLVQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHE 1860
Query: 1861 GICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNEN 1920
GICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNEN
Sbjct: 1861 GICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNEN 1920
Query: 1921 SKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSIT 1980
SKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSIT
Sbjct: 1921 SKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSIT 1980
Query: 1981 KSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIG 2040
KSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIG
Sbjct: 1981 KSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIG 2040
Query: 2041 DHLLLRCCPLWRSLLDFCEAQQTLVPAGQVRVCRRPTMPS 2080
DHLLLRCCPLWRSLLDFCEAQQTLVPAGQVRVCRRPTMPS
Sbjct: 2041 DHLLLRCCPLWRSLLDFCEAQQTLVPAGQVRVCRRPTMPS 2080
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 4195 bits (10879), Expect = 0.0
Identities = 2073/2075 (99%), Positives = 2074/2075 (99%)
Query: 6 SRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPT 65
+ SAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPT
Sbjct: 575 TNSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPT 634
Query: 66 RAELARHRVVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAG 125
RAELARHRVVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAG
Sbjct: 635 RAELARHRVVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAG 694
Query: 126 DHMQVTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFIS 185
DHMQVTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFIS
Sbjct: 695 DHMQVTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFIS 754
Query: 186 RHFYVAKGNPIHARGKVPPHPRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEKVQEA 245
RHFYVAKGNPIHARGKVPPHPRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEKVQEA
Sbjct: 755 RHFYVAKGNPIHARGKVPPHPRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEKVQEA 814
Query: 246 YNTWPSCWGGREQRCICVVSHGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLST 305
YNTWPSCWGGREQRCICVVSHGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLST
Sbjct: 815 YNTWPSCWGGREQRCICVVSHGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLST 874
Query: 306 VHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRE 365
VHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRE
Sbjct: 875 VHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRE 934
Query: 366 CVERHSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTA 425
CVERHSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTA
Sbjct: 935 CVERHSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTA 994
Query: 426 MVKAEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEA 485
MVKAEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEA
Sbjct: 995 MVKAEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEA 1054
Query: 486 EDAEADFWPWDGELNADDAILRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLP 545
EDAEADFWPWDGELNADDAILRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLP
Sbjct: 1055 EDAEADFWPWDGELNADDAILRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLP 1114
Query: 546 PAALRKLLHAEPERYRHCSFVPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLV 605
PAALRKLLHAEPERYRHCSFVPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLV
Sbjct: 1115 PAALRKLLHAEPERYRHCSFVPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLV 1174
Query: 606 QLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDP 665
QLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDP
Sbjct: 1175 QLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDP 1234
Query: 666 SQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWE 725
SQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWE
Sbjct: 1235 SQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWE 1294
Query: 726 QGLRILGLEYSLRVPPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLD 785
QGLRILGLEYSLRVPPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLD
Sbjct: 1295 QGLRILGLEYSLRVPPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLD 1354
Query: 786 DALSVRDLGPRCEVAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQD 845
DALSVRDLGPRCEVAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQD
Sbjct: 1355 DALSVRDLGPRCEVAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQD 1414
Query: 846 VLSLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRE 905
VLSLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRE
Sbjct: 1415 VLSLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRE 1474
Query: 906 LPARLDSVDACVVAACYFSRLLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNR 965
LPARLDSVDACVVAACYFSRLLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNR
Sbjct: 1475 LPARLDSVDACVVAACYFSRLLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNR 1534
Query: 966 LVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDT 1025
LVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDT
Sbjct: 1535 LVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDT 1594
Query: 1026 RLHLLASLWKQVQFAARTQDYEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGH 1085
RLHLLASLWKQVQFAARTQDYEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGH
Sbjct: 1595 RLHLLASLWKQVQFAARTQDYEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGH 1654
Query: 1086 QQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQH 1145
QQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQH
Sbjct: 1655 QQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQH 1714
Query: 1146 ALAQSYQRRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYG 1205
ALAQSYQRRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYG
Sbjct: 1715 ALAQSYQRRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYG 1774
Query: 1206 SLQLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLEL 1265
SLQLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLEL
Sbjct: 1775 SLQLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLEL 1834
Query: 1266 VELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHG 1325
VELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHG
Sbjct: 1835 VELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHG 1894
Query: 1326 FLVPSPQLWTVAPGFSLCLEHVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESA 1385
FLVPSPQLWTVAPGFSLCLEHVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESA
Sbjct: 1895 FLVPSPQLWTVAPGFSLCLEHVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESA 1954
Query: 1386 TGAVAENDSVTLQHLSVSWEASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEG 1445
TGAVAENDSVTLQHLSVSWEASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEG
Sbjct: 1955 TGAVAENDSVTLQHLSVSWEASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEG 2014
Query: 1446 LPAPTASPRPGPSSLGPGLNVDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLFVHHMG 1505
LPAPTASPRPGPSSLGPGLNVDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLFVHHMG
Sbjct: 2015 LPAPTASPRPGPSSLGPGLNVDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLFVHHMG 2074
Query: 1506 MEKVPEEVLRPGTLFTVELLPKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVI 1565
MEKVPEEVLRPGTLFTVELLPKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVI
Sbjct: 2075 MEKVPEEVLRPGTLFTVELLPKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVI 2134
Query: 1566 PSRFLERQTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKS 1625
PSRFLERQTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKS
Sbjct: 2135 PSRFLERQTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKS 2194
Query: 1626 NQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEF 1685
NQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEF
Sbjct: 2195 NQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEF 2254
Query: 1686 PVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSRE 1745
PVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSRE
Sbjct: 2255 PVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSRE 2314
Query: 1746 DLVWYKKVLWEARKFELDRHEVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPL 1805
DLVWYKKVLWEARKFELDRHEVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPL
Sbjct: 2315 DLVWYKKVLWEARKFELDRHEVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPL 2374
Query: 1806 VQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAF 1865
VQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAF
Sbjct: 2375 VQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAF 2434
Query: 1866 PSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANL 1925
PSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANL
Sbjct: 2435 PSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANL 2494
Query: 1926 EEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGS 1985
EEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGS
Sbjct: 2495 EEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGS 2554
Query: 1986 EWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLL 2045
EWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLL
Sbjct: 2555 EWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLL 2614
Query: 2046 RCCPLWRSLLDFCEAQQTLVPAGQVRVCRRPTMPS 2080
RCCPLWRSLLDFCEAQQTLVPAGQVRVCRRPTMPS
Sbjct: 2615 RCCPLWRSLLDFCEAQQTLVPAGQVRVCRRPTMPS 2649
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 272 bits (696), Expect = 2e-72
Identities = 160/398 (40%), Positives = 233/398 (58%), Gaps = 30/398 (7%)
Query: 6 SRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPT 65
S SAAD+YI++Y H +V G+P+A PLRV + +R + PV QYC ++ F+ P
Sbjct: 699 SNSAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQ 758
Query: 66 RAELARHRVVVTTTSQAR---ELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLV 122
+ ++ +HRVVV T + ++ +L + GFF+HIL+DEAAQ +ECE + PLA A+ TR+V
Sbjct: 759 KEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIV 818
Query: 123 LAGDHMQVTPRLFS-VARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIV 181
LAGDHMQ++P ++S AR R +LL RL+ Y E R++ ENYR +AI+
Sbjct: 819 LAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEF-----PCRILLCENYRSHEAII 873
Query: 182 SFISRHFYVAKGNPIHARGKVPPHPRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEK 241
++ S FY K + A GK P H YPL F G ++ + ++ N AE+ +VVE+
Sbjct: 874 NYTSELFYEGK---LMASGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVER 930
Query: 242 VQEAYNTWPSCWGGREQRCICVVS-HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRV 300
V+E WP WG + I VV+ + QV +R ELR++ L V+V + G+QFRV
Sbjct: 931 VEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRV 990
Query: 301 VVLSTV---HTCQSLLSP------------GALAPEFFTDARVLNTVLTRAQSQLVVVGD 345
+ LSTV HTC+ +P L F ++ ++LNT +TRAQS + VVGD
Sbjct: 991 LFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD 1050
Query: 346 AVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVE 383
+ALCS G C K WE FI C E S+ G++ EQ++
Sbjct: 1051 PIALCSIGRCRKFWERFIALCHENSSL--HGITFEQIK 1086
Score = 113 bits (282), Expect = 2e-24
Identities = 100/336 (29%), Positives = 149/336 (44%), Gaps = 45/336 (13%)
Query: 1758 RKFELDRHEVILCTCSCAASASLKILDVR-----QILVDEAGMATEPETLIPLVQFPQAE 1812
+K ++ +H V++ T + S L LD+ IL+DEA A E ET++PL Q
Sbjct: 758 QKEDILKHRVVVVTLN--TSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNT 815
Query: 1813 KVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHED-------AHMLDTQYRMHEGICAF 1865
++VL GDH QL P V +E + L SL +R +E +L YR HE I +
Sbjct: 816 RIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINY 875
Query: 1866 PSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANL 1925
S FY+ KL S A K+ P+ F +G + E N + N
Sbjct: 876 TSELFYEGKLMA--------SGKQPAHKDFYPLTFFTARGED------VQEKNSTAFYNN 921
Query: 1926 EEVAEVVRITKQL-----TLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSIT 1980
EV EVV ++L ++ I V+TPY Q I LR++ ++ V V +
Sbjct: 922 AEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVL 981
Query: 1981 KSQGSEWRYVLVSTVRTCAKSDLDQRPTK--------SWLKKFLGFVVDPNQVNVAVTRA 2032
QG ++R + +STVRT Q P K S GF+ + +N A+TRA
Sbjct: 982 NVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRA 1041
Query: 2033 QEGLCLIGDHLLL----RCCPLWRSLLDFCEAQQTL 2064
Q + ++GD + L RC W + C +L
Sbjct: 1042 QSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSL 1077
>gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens]
Length = 1118
Score = 184 bits (467), Expect = 8e-46
Identities = 157/514 (30%), Positives = 239/514 (46%), Gaps = 86/514 (16%)
Query: 1565 IPSRFLERQTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHK 1624
+P RF + G LN SQ AV+ L++P ++IQGPPGTGKT+ IV+ +
Sbjct: 459 LPKRFTAQ-------GLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLAR 511
Query: 1625 SNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASE 1684
Q GP +L C PSN +VD L + + LK +R+ ++ EA +
Sbjct: 512 ------QGNGP-----------VLVCAPSNIAVDQLTEKI-HQTGLKVVRLCAKSREAID 553
Query: 1685 FPVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSR 1744
PV + LH++IR + + K + + GEL S
Sbjct: 554 SPVS----------------------FLALHNQIRNMDSMPELQ-KLQQLKDETGELSSA 590
Query: 1745 EDLVWYKKVLWEARKFELDRHEVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIP 1804
++ Y+ + A + L +VI CTC A L + R IL+DE+ ATEPE ++P
Sbjct: 591 DEKR-YRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVP 649
Query: 1805 LVQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHE---DAHMLDTQYRMHEG 1861
+V A++++L+GDH QL PVV ++ GL +SLFER L QYRMH
Sbjct: 650 VVL--GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPA 707
Query: 1862 ICAFPSVAFYKSKLKTWQGLRRPPSVLGHAG----KESCPVIFGHVQGHERSLLVSTDEG 1917
+ AFPS FY+ L+ G+ V + P+ F QG E T
Sbjct: 708 LSAFPSNIFYEGSLQN--GVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYL 765
Query: 1918 NENSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQAS------EISKALRREGI 1971
N AN+E++ TK L G +P I ++TPY Q S + S +L +
Sbjct: 766 NRTEAANVEKIT-----TKLLKAG--AKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 818
Query: 1972 AGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTR 2031
V ++S+ QG E ++++S VR + GF+ DP ++NVA+TR
Sbjct: 819 QEVEIASVDAFQGREKDFIILSCVRANEHQGI-------------GFLNDPRRLNVALTR 865
Query: 2032 AQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV 2065
A+ G+ ++G+ L PLW LL++ + Q+ LV
Sbjct: 866 ARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV 899
Score = 61.2 bits (147), Expect = 1e-08
Identities = 80/303 (26%), Positives = 120/303 (39%), Gaps = 38/303 (12%)
Query: 62 RPPTRAELARHRVVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRL 121
R R L V+ T A + R+ F ILIDE+ Q E E + P+ + +L
Sbjct: 600 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAK--QL 657
Query: 122 VLAGDHMQVTPRLFSVARARAA-EHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAI 180
+L GDH Q+ P + A+A +L RL + R RL YR A+
Sbjct: 658 ILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG-------IRPIRL--QVQYRMHPAL 708
Query: 181 VSFISRHFYVAK-GNPIHARGKVP-------PHPRHYPLMFCHVAGSPDRDMSMASWLNL 232
+F S FY N + A +V P P P+ F G + S S+LN
Sbjct: 709 SAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDK-PMFFYVTQGQEEIASSGTSYLNR 767
Query: 233 AEIAQVVEKVQEAYNTWPSCWGGREQRCICVVSHGAQVSALRQ------ELRRRDLGQVS 286
E A V + + G + + + + Q S L Q L + +V
Sbjct: 768 TEAANVEKITTKLLKA-----GAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVE 822
Query: 287 VGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDA 346
+ S + GR+ ++LS V + F D R LN LTRA+ +++VG+
Sbjct: 823 IASVDAFQGREKDFIILSCVRANEHQ------GIGFLNDPRRLNVALTRARYGVIIVGNP 876
Query: 347 VAL 349
AL
Sbjct: 877 KAL 879
>gi|14251207 MOV10-like 1 [Homo sapiens]
Length = 1211
Score = 131 bits (329), Expect = 8e-30
Identities = 145/507 (28%), Positives = 215/507 (42%), Gaps = 120/507 (23%)
Query: 1584 LNPSQNVAVREALE---KPFT-VIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGE 1639
LN +Q +AV+ L +P ++ GPPGTGKT+ + V H +
Sbjct: 745 LNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFA-------------- 790
Query: 1640 KRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKS 1699
L IL C PSN + D++ LR E K L+ P V
Sbjct: 791 --LPDSRILVCAPSNSAADLVC---LRLHESKVLQ-----------PATMV--------- 825
Query: 1700 PREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARK 1759
R N + R + A PY + ED+ W+A +
Sbjct: 826 ----RVNATCR---FEEIVIDAVKPYCRD---------------GEDI-------WKASR 856
Query: 1760 FELDRHEVILCTCSCAA---SASLKILDVRQILVDEAGMATEPETLIPL-VQFPQAEKVV 1815
F +I+ TCS + +++ + VDEAG A+EPE LIPL + + ++V
Sbjct: 857 FR-----IIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISGQIV 911
Query: 1816 LLGDHKQLRPVVKNERLQNLGLDRSLFER------YHED--------AH------MLDTQ 1855
L GD QL PV+K+ GL+ S ER Y D AH L
Sbjct: 912 LAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVKN 971
Query: 1856 YRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLG--HAGKESCPVIFGHVQGHERSLLVS 1913
YR HE + PS FY +L+ S+LG K+ P+IF V+G E
Sbjct: 972 YRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEKLPKKGFPLIFHGVRGSEAR---- 1027
Query: 1914 TDEGNENSKANLEEVAEVVRITKQL--TLGRTVEPQDIAVLTPYNAQASEISKALRREGI 1971
EG S N E +V+R L ++ V DI V+TPY Q +I LR +
Sbjct: 1028 --EGKSPSWFNPAEAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQVEKIRILLRNVDL 1085
Query: 1972 AGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTR 2031
+ V S+ + QG E+ +++STVR+ D R FLGF+ + + NVA+TR
Sbjct: 1086 MDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDR-------YFLGFLSNSKRFNVAITR 1138
Query: 2032 AQEGLCLIGD-HLLLRCCPLWRSLLDF 2057
+ L ++G+ H+L+R P + +LL++
Sbjct: 1139 PKALLIVLGNPHVLVR-DPCFGALLEY 1164
Score = 107 bits (267), Expect = 1e-22
Identities = 118/409 (28%), Positives = 182/409 (44%), Gaps = 42/409 (10%)
Query: 4 SPSRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRP 63
+PS SAAD+ S V AT +RV T R YC +D
Sbjct: 800 APSNSAADLVCLRLHESKVL---QPATMVRVNATCRFEEIVIDAVKPYCRDGEDIW---- 852
Query: 64 PTRAELARHRVVVTTTSQAR---ELRVPVGFFSHILIDEAAQMLECEALTPLAYASH-GT 119
+ +R R+++TT S + ++ V VG F+H+ +DEA Q E E L PL S
Sbjct: 853 ----KASRFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISG 908
Query: 120 RLVLAGDHMQVTPRLFS-VARARAAEHTLLHRLFL--CYQQE--------THEVARQSRL 168
++VLAGD MQ+ P + S +A A + L RL YQ++ H ++L
Sbjct: 909 QIVLAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKL 968
Query: 169 VFHENYRCTDAIVSFISRHFYVAK----GNPIHARG-----KVPPHPRHYPLMFCHVAGS 219
V +NYR +A++ SR FY + +P K+P + +PL+F V GS
Sbjct: 969 V--KNYRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEKLPK--KGFPLIFHGVRGS 1024
Query: 220 PDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVSHGAQVSALRQELRR 279
R+ SW N AE QV+ ++ S + I + QV +R LR
Sbjct: 1025 EAREGKSPSWFNPAEAVQVLRYCCLLAHSISSQVSASDIGVI--TPYRKQVEKIRILLRN 1082
Query: 280 RDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQ 339
DL + VGS E G+++ V+++STV + + F ++++ N +TR ++
Sbjct: 1083 VDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKAL 1142
Query: 340 LVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGL-SMEQVEQGVA 387
L+V+G+ L G L E I V P L S++ +GVA
Sbjct: 1143 LIVLGNPHVLVRDPCFGALLEYSITNGVYMGCDLPPALQSLQNCGEGVA 1191
>gi|219521928 DIS3 mitotic control homolog (S. cerevisiae)-like
isoform 1 [Homo sapiens]
Length = 1054
Score = 130 bits (326), Expect = 2e-29
Identities = 154/633 (24%), Positives = 264/633 (41%), Gaps = 98/633 (15%)
Query: 586 IQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPR 645
I + G + GD V+V+LL P+ +GR + + + + A P
Sbjct: 277 ILIHGMKARNRSIHGDVVVVELL-----PKNEWKGRTVALCENDCDDKA-----SGESPS 326
Query: 646 IMVPINGSVTKIFVAELKD-----PSQVPIYSLRKG-----------RLQRVGLERLTAE 689
+P G V I +D PS+ + S K R+ ++ + AE
Sbjct: 327 EPMP-TGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAE 385
Query: 690 ARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITK 749
V+I W YP G VL E + + +E S+ V P +A + +
Sbjct: 386 TLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQMCE 445
Query: 750 VLQKYHTELGRVAGRREDCR-----AFLTFTVDPQGACNLDDALSVRDLGP-RCEVAVHI 803
+ +V+ E R + L F++DP+G ++DD LSVR L E+ VHI
Sbjct: 446 MPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHI 505
Query: 804 TDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLT 863
DV FV + +D+EAR + +Y R MLP+ L D+ SLL G DR A+S+
Sbjct: 506 ADVTHFVAPNSYIDIEARTRATTYYLADRR-YDMLPSVLSADLCSLLGGVDRYAVSIMWE 564
Query: 864 MEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELP--------ARLDSVDA 915
++KAS ++K + + ++++S +L YE A+E++ + ++P +R ++
Sbjct: 565 LDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEE 624
Query: 916 CVVAACYFSRLLRRHRLRSD-C---------FYEQPDEDGTLGFRAAHIMVKEYMIQFNR 965
V A + + R R + D C Q D+ + H ++ + ++ +
Sbjct: 625 LVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNI-----HDLIPKQPLEVHE 679
Query: 966 LVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDT 1025
VAE ++ V W+ P +AL +H PP
Sbjct: 680 TVAECMI--LANHWVAKKIWESFPH----QALLRQH-------------------PPPHQ 714
Query: 1026 RLHL-LASLWKQVQFAARTQDYEQMVD-LVTTDDMH-PFLAPAGRDLRKALERSAF---- 1078
L K F T+ + + D L +D H P + R + +A
Sbjct: 715 EFFSELRECAKAKGFFIDTRSNKTLADSLDNANDPHDPIVNRLLRSMATQAMSNALYFST 774
Query: 1079 GRCARGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHG------GSAYSAR 1132
G CA +++ HY L +D YT TSPIRRY D+V+ R ++ A+ G+ +S +
Sbjct: 775 GSCA---EEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLFSNK 831
Query: 1133 DIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK 1165
D++ LC+ + ++ AQ Q+++ L + K
Sbjct: 832 DLEELCRHINNRNQAAQHSQKQSTELFQCMYFK 864
>gi|19115966 DIS3 mitotic control homolog (S. cerevisiae)-like isoform
2 [Homo sapiens]
Length = 971
Score = 130 bits (326), Expect = 2e-29
Identities = 154/633 (24%), Positives = 264/633 (41%), Gaps = 98/633 (15%)
Query: 586 IQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPR 645
I + G + GD V+V+LL P+ +GR + + + + A P
Sbjct: 194 ILIHGMKARNRSIHGDVVVVELL-----PKNEWKGRTVALCENDCDDKA-----SGESPS 243
Query: 646 IMVPINGSVTKIFVAELKD-----PSQVPIYSLRKG-----------RLQRVGLERLTAE 689
+P G V I +D PS+ + S K R+ ++ + AE
Sbjct: 244 EPMP-TGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAE 302
Query: 690 ARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITK 749
V+I W YP G VL E + + +E S+ V P +A + +
Sbjct: 303 TLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQMCE 362
Query: 750 VLQKYHTELGRVAGRREDCR-----AFLTFTVDPQGACNLDDALSVRDLGP-RCEVAVHI 803
+ +V+ E R + L F++DP+G ++DD LSVR L E+ VHI
Sbjct: 363 MPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHI 422
Query: 804 TDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLT 863
DV FV + +D+EAR + +Y R MLP+ L D+ SLL G DR A+S+
Sbjct: 423 ADVTHFVAPNSYIDIEARTRATTYYLADRR-YDMLPSVLSADLCSLLGGVDRYAVSIMWE 481
Query: 864 MEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELP--------ARLDSVDA 915
++KAS ++K + + ++++S +L YE A+E++ + ++P +R ++
Sbjct: 482 LDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEE 541
Query: 916 CVVAACYFSRLLRRHRLRSD-C---------FYEQPDEDGTLGFRAAHIMVKEYMIQFNR 965
V A + + R R + D C Q D+ + H ++ + ++ +
Sbjct: 542 LVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQLDDKKNI-----HDLIPKQPLEVHE 596
Query: 966 LVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDT 1025
VAE ++ V W+ P +AL +H PP
Sbjct: 597 TVAECMI--LANHWVAKKIWESFPH----QALLRQH-------------------PPPHQ 631
Query: 1026 RLHL-LASLWKQVQFAARTQDYEQMVD-LVTTDDMH-PFLAPAGRDLRKALERSAF---- 1078
L K F T+ + + D L +D H P + R + +A
Sbjct: 632 EFFSELRECAKAKGFFIDTRSNKTLADSLDNANDPHDPIVNRLLRSMATQAMSNALYFST 691
Query: 1079 GRCARGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHG------GSAYSAR 1132
G CA +++ HY L +D YT TSPIRRY D+V+ R ++ A+ G+ +S +
Sbjct: 692 GSCA---EEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLFSNK 748
Query: 1133 DIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK 1165
D++ LC+ + ++ AQ Q+++ L + K
Sbjct: 749 DLEELCRHINNRNQAAQHSQKQSTELFQCMYFK 781
>gi|190014625 DIS3 mitotic control isoform b [Homo sapiens]
Length = 928
Score = 119 bits (297), Expect = 4e-26
Identities = 136/568 (23%), Positives = 224/568 (39%), Gaps = 87/568 (15%)
Query: 620 GRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQ 679
GRV+G++KR W P G ++K + E S+ +++ R+
Sbjct: 313 GRVVGIIKRN------------WRPYC-----GMLSKSDIKE----SRRHLFTPADKRIP 351
Query: 680 RVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRV 739
R+ +E A R V I W + YP G L + E +L LE+ +
Sbjct: 352 RIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETETEVLLLEHDVPH 411
Query: 740 PPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDL-GPRCE 798
P QA ++ + + + + RED R +VDP G ++DDAL R+L E
Sbjct: 412 QPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLE 471
Query: 799 VAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAI 858
V VHI DV+ F+ LD E+ R+G Y + + M+P L ++ SL DRLA
Sbjct: 472 VGVHIADVSHFIRPGNALDQESARRGTTVYLCEKR-IDMVPELLSSNLCSLKCDVDRLAF 530
Query: 859 SLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVV 918
S M + LK+ +F SV+ S L+Y EA+ I + D + +
Sbjct: 531 SCIWEMNHNAEILKT-KFTKSVINSKASLTYAEAQLRI--------DSANMNDDITTSLR 581
Query: 919 AACYFSRLLRRHRLRS--------------DCFYEQPDEDGTLGFRAAHIMVKEYMIQFN 964
+++L++ R+ D P + T R + MV+E+M+ N
Sbjct: 582 GLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLAN 641
Query: 965 RLVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPD 1024
VA K + E+ + L H +PP
Sbjct: 642 ISVA--------------------------KKIHEEFSEHALLRKH---------PAPPP 666
Query: 1025 TRLHLLASLWKQVQFAARTQDYEQMVDLV--TTDDMHPFLAPAGRDLRKALERSAFGRCA 1082
+ +L + +T + + + + P+L R L A C+
Sbjct: 667 SNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPTFPYLNTLLRILATRCMMQAVYFCS 726
Query: 1083 RGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARD---IDGLCQ 1139
G HY L YT TSPIRRY DV++ R + +A+G + D + +C+
Sbjct: 727 -GMDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTDKHKLADICK 785
Query: 1140 AFSLQHALAQSYQRRARSLHLAVQLKAQ 1167
+ +H +AQ QR + + H + K++
Sbjct: 786 NLNFRHKMAQYAQRASVAFHTQLFFKSK 813
>gi|190014623 DIS3 mitotic control isoform a [Homo sapiens]
Length = 958
Score = 119 bits (297), Expect = 4e-26
Identities = 136/568 (23%), Positives = 224/568 (39%), Gaps = 87/568 (15%)
Query: 620 GRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQ 679
GRV+G++KR W P G ++K + E S+ +++ R+
Sbjct: 343 GRVVGIIKRN------------WRPYC-----GMLSKSDIKE----SRRHLFTPADKRIP 381
Query: 680 RVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRV 739
R+ +E A R V I W + YP G L + E +L LE+ +
Sbjct: 382 RIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETETEVLLLEHDVPH 441
Query: 740 PPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDL-GPRCE 798
P QA ++ + + + + RED R +VDP G ++DDAL R+L E
Sbjct: 442 QPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLE 501
Query: 799 VAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAI 858
V VHI DV+ F+ LD E+ R+G Y + + M+P L ++ SL DRLA
Sbjct: 502 VGVHIADVSHFIRPGNALDQESARRGTTVYLCEKR-IDMVPELLSSNLCSLKCDVDRLAF 560
Query: 859 SLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVV 918
S M + LK+ +F SV+ S L+Y EA+ I + D + +
Sbjct: 561 SCIWEMNHNAEILKT-KFTKSVINSKASLTYAEAQLRI--------DSANMNDDITTSLR 611
Query: 919 AACYFSRLLRRHRLRS--------------DCFYEQPDEDGTLGFRAAHIMVKEYMIQFN 964
+++L++ R+ D P + T R + MV+E+M+ N
Sbjct: 612 GLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLAN 671
Query: 965 RLVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPD 1024
VA K + E+ + L H +PP
Sbjct: 672 ISVA--------------------------KKIHEEFSEHALLRKH---------PAPPP 696
Query: 1025 TRLHLLASLWKQVQFAARTQDYEQMVDLV--TTDDMHPFLAPAGRDLRKALERSAFGRCA 1082
+ +L + +T + + + + P+L R L A C+
Sbjct: 697 SNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPTFPYLNTLLRILATRCMMQAVYFCS 756
Query: 1083 RGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARD---IDGLCQ 1139
G HY L YT TSPIRRY DV++ R + +A+G + D + +C+
Sbjct: 757 -GMDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTDKHKLADICK 815
Query: 1140 AFSLQHALAQSYQRRARSLHLAVQLKAQ 1167
+ +H +AQ QR + + H + K++
Sbjct: 816 NLNFRHKMAQYAQRASVAFHTQLFFKSK 843
>gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 117 bits (294), Expect = 9e-26
Identities = 140/524 (26%), Positives = 216/524 (41%), Gaps = 133/524 (25%)
Query: 1585 NPSQNVAVREALE-----KPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGE 1639
NP Q A+R + P+ +I GPPGTGKT+ + + +QV
Sbjct: 500 NPEQLQAMRHIVTGTTRPAPY-IIFGPPGTGKTVTLVEAI--------KQVV-------- 542
Query: 1640 KRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKS 1699
K L IL C PSN D+L L R+ L P +Y A + + +R
Sbjct: 543 KHLPKAHILACAPSNSGADLLCQRL--RVHL-PSSIYRLLAPSRD-----------IRMV 588
Query: 1700 PREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARK 1759
P + +P + ++GE ++ A+K
Sbjct: 589 PEDIKP-------------------------CCNWDAKKGEY------------VFPAKK 611
Query: 1760 FELDRHEVILCTCSCAA---SASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEK--- 1813
+L + V++ T A SA I I +DEAG EPE+L+ + + ++
Sbjct: 612 -KLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGD 670
Query: 1814 ----VVLLGDHKQLRPVVKNERLQNLGLDRSLFER-------YHEDAHMLDTQ------- 1855
+VL GD +QL PV+++ Q GL SL ER Y + D Q
Sbjct: 671 PGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLR 730
Query: 1856 -YRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAG--KESCPVIFGHVQGHERSLLV 1912
YR H I P+ +Y+ +L+ + AG ++ P+IF V G +
Sbjct: 731 NYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDER--- 787
Query: 1913 STDEGNENSKANLEEVAEVVRITKQLTLGRT------VEPQDIAVLTPYNAQASEISKAL 1966
EGN S N EE A V K L + + P+ + V++PY Q +I +
Sbjct: 788 ---EGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCI 844
Query: 1967 RR--------EGIAGVAVSSITKSQGSEWRYVLVSTVRTC---AKSDLDQRPTKSWLKKF 2015
+ + I + V S+ + QG E +L+STVR+ + DLD
Sbjct: 845 TKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFN--------- 895
Query: 2016 LGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCE 2059
LGF+ +P + NVAVTRA+ L ++G+ LLL P W+ L+FC+
Sbjct: 896 LGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCK 939
Score = 86.7 bits (213), Expect = 2e-16
Identities = 106/414 (25%), Positives = 184/414 (44%), Gaps = 56/414 (13%)
Query: 1 MSSSPSRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQA 60
++ +PS S AD+ + H ++ R++ R + P ++ CC D ++
Sbjct: 551 LACAPSNSGADLLCQRL------RVHLPSSIYRLLAPSRDIRMV-PEDIKPCCNWDAKKG 603
Query: 61 -FRPPTRAELARHRVVVTTTSQAREL---RVPVGFFSHILIDEAAQMLECEALTPLA--- 113
+ P + +L +RV++TT A L + P+ F+HI IDEA +E E+L +A
Sbjct: 604 EYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLM 663
Query: 114 ----YASHGTRLVLAGDHMQVTPRLFS-VARARAAEHTLLHRLFL---CYQQETHEVARQ 165
G +LVLAGD Q+ P L S + + ++LL RL Y++ Q
Sbjct: 664 EVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQ 723
Query: 166 SRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRH----------YPLMFCH 215
NYR I+ ++ +Y + + A V R +P++F
Sbjct: 724 FITKLLRNYRSHPTILDIPNQLYYEGE---LQACADVVDRERFCRWAGLPRQGFPIIFHG 780
Query: 216 VAGSPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQ---RCICVVS-HGAQVS 271
V G +R+ + S+ N E A V ++ PS G+ + R + V+S + QV
Sbjct: 781 VMGKDEREGNSPSFFNPEEAATVTSYLKLLLA--PSSKKGKARLSPRSVGVISPYRKQVE 838
Query: 272 ALR-------QELR-RRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGA-LAPEF 322
+R +ELR D+ + VGS E G++ V+++STV + QS + F
Sbjct: 839 KIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGF 898
Query: 323 FTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVER--HSVCP 374
+ + N +TRA++ L++VG+ + L W+ F+ C E ++ CP
Sbjct: 899 LKNPKRFNVAVTRAKALLIIVGNPLLL----GHDPDWKVFLEFCKENGGYTGCP 948
>gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 117 bits (294), Expect = 9e-26
Identities = 140/524 (26%), Positives = 216/524 (41%), Gaps = 133/524 (25%)
Query: 1585 NPSQNVAVREALE-----KPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGE 1639
NP Q A+R + P+ +I GPPGTGKT+ + + +QV
Sbjct: 500 NPEQLQAMRHIVTGTTRPAPY-IIFGPPGTGKTVTLVEAI--------KQVV-------- 542
Query: 1640 KRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKS 1699
K L IL C PSN D+L L R+ L P +Y A + + +R
Sbjct: 543 KHLPKAHILACAPSNSGADLLCQRL--RVHL-PSSIYRLLAPSRD-----------IRMV 588
Query: 1700 PREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARK 1759
P + +P + ++GE ++ A+K
Sbjct: 589 PEDIKP-------------------------CCNWDAKKGEY------------VFPAKK 611
Query: 1760 FELDRHEVILCTCSCAA---SASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEK--- 1813
+L + V++ T A SA I I +DEAG EPE+L+ + + ++
Sbjct: 612 -KLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGD 670
Query: 1814 ----VVLLGDHKQLRPVVKNERLQNLGLDRSLFER-------YHEDAHMLDTQ------- 1855
+VL GD +QL PV+++ Q GL SL ER Y + D Q
Sbjct: 671 PGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLR 730
Query: 1856 -YRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAG--KESCPVIFGHVQGHERSLLV 1912
YR H I P+ +Y+ +L+ + AG ++ P+IF V G +
Sbjct: 731 NYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDER--- 787
Query: 1913 STDEGNENSKANLEEVAEVVRITKQLTLGRT------VEPQDIAVLTPYNAQASEISKAL 1966
EGN S N EE A V K L + + P+ + V++PY Q +I +
Sbjct: 788 ---EGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCI 844
Query: 1967 RR--------EGIAGVAVSSITKSQGSEWRYVLVSTVRTC---AKSDLDQRPTKSWLKKF 2015
+ + I + V S+ + QG E +L+STVR+ + DLD
Sbjct: 845 TKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFN--------- 895
Query: 2016 LGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCE 2059
LGF+ +P + NVAVTRA+ L ++G+ LLL P W+ L+FC+
Sbjct: 896 LGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCK 939
Score = 86.7 bits (213), Expect = 2e-16
Identities = 106/414 (25%), Positives = 184/414 (44%), Gaps = 56/414 (13%)
Query: 1 MSSSPSRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQA 60
++ +PS S AD+ + H ++ R++ R + P ++ CC D ++
Sbjct: 551 LACAPSNSGADLLCQRL------RVHLPSSIYRLLAPSRDIRMV-PEDIKPCCNWDAKKG 603
Query: 61 -FRPPTRAELARHRVVVTTTSQAREL---RVPVGFFSHILIDEAAQMLECEALTPLA--- 113
+ P + +L +RV++TT A L + P+ F+HI IDEA +E E+L +A
Sbjct: 604 EYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLM 663
Query: 114 ----YASHGTRLVLAGDHMQVTPRLFS-VARARAAEHTLLHRLFL---CYQQETHEVARQ 165
G +LVLAGD Q+ P L S + + ++LL RL Y++ Q
Sbjct: 664 EVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQ 723
Query: 166 SRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRH----------YPLMFCH 215
NYR I+ ++ +Y + + A V R +P++F
Sbjct: 724 FITKLLRNYRSHPTILDIPNQLYYEGE---LQACADVVDRERFCRWAGLPRQGFPIIFHG 780
Query: 216 VAGSPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQ---RCICVVS-HGAQVS 271
V G +R+ + S+ N E A V ++ PS G+ + R + V+S + QV
Sbjct: 781 VMGKDEREGNSPSFFNPEEAATVTSYLKLLLA--PSSKKGKARLSPRSVGVISPYRKQVE 838
Query: 272 ALR-------QELR-RRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGA-LAPEF 322
+R +ELR D+ + VGS E G++ V+++STV + QS + F
Sbjct: 839 KIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGF 898
Query: 323 FTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVER--HSVCP 374
+ + N +TRA++ L++VG+ + L W+ F+ C E ++ CP
Sbjct: 899 LKNPKRFNVAVTRAKALLIIVGNPLLL----GHDPDWKVFLEFCKENGGYTGCP 948
>gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 115 bits (289), Expect = 3e-25
Identities = 146/547 (26%), Positives = 218/547 (39%), Gaps = 113/547 (20%)
Query: 1544 ASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNVAVREAL-EKPFTV 1602
AS L+ + GR P P + P F L+ SQ AV AL +K +
Sbjct: 163 ASSLI-EVLFGRSAPSPASEIHPLTFFNTC----------LDTSQKEAVLFALSQKELAI 211
Query: 1603 IQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAG 1662
I GPPGTGKT + I+ K G +L C PSN +VD L
Sbjct: 212 IHGPPGTGKTTTVVEIILQAVKQ------------------GLKVLCCAPSNIAVDNL-- 251
Query: 1663 LLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAP 1722
+ R+ L R+ R G P + L SI H
Sbjct: 252 --VERLALCKQRIL------------------------RLGHPARLLESIQQHSLDAVLA 285
Query: 1723 NPYSSEIKAFDTRLQRGELFS--------------REDLVWYKKVLWEARKF----ELDR 1764
S++I A D R ++F R ++ +K L E + L
Sbjct: 286 RSDSAQIVA-DIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTS 344
Query: 1765 HEVILCT-CSCAASASLKILDVRQ---ILVDEAGMATEPETLIPLVQFPQAEKVVLLGDH 1820
V+L T +A LK+L +++DE A E IPL++ A K +L GDH
Sbjct: 345 ANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLK---ARKCILAGDH 401
Query: 1821 KQLRPVVKNERLQNLGLDRSLFERYHED-----AHMLDTQYRMHEGICAFPSVAFYKSKL 1875
KQL P + + GL SL ER E+ L QYRMH+ I + S Y +L
Sbjct: 402 KQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQL 461
Query: 1876 KTWQG-----LRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAE 1930
LR P V + P++ G L +E +E SK N EV
Sbjct: 462 TAHSSVARHLLRDLPGVAA-TEETGVPLLLVDTAG---CGLFELEEEDEQSKGNPGEV-R 516
Query: 1931 VVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYV 1990
+V + Q + V +DIAV++PYN Q + ++L + + S+ QG E V
Sbjct: 517 LVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRH-PELEIKSVDGFQGREKEAV 575
Query: 1991 LVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPL 2050
++S VR+ K + +GF+ + ++NVAVTRA+ + +I D +
Sbjct: 576 ILSFVRSNRKGE-------------VGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAF 622
Query: 2051 WRSLLDF 2057
++L+++
Sbjct: 623 LKTLVEY 629
Score = 59.3 bits (142), Expect = 4e-08
Identities = 100/416 (24%), Positives = 159/416 (38%), Gaps = 65/416 (15%)
Query: 87 VPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAA-EH 145
+P +F ++IDE AQ LE PL A + +LAGDH Q+ P S A A
Sbjct: 364 LPESYFDVVVIDECAQALEASCWIPLLKAR---KCILAGDHKQLPPTTVSHKAALAGLSL 420
Query: 146 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH 205
+L+ RL E + YR AI+ + S Y+ + + A V H
Sbjct: 421 SLMERL-------AEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQ---LTAHSSVARH 470
Query: 206 ------------PRHYPLMFCHVAGS---PDRDMSMASWLNLAEIAQVVEKVQEAYNTWP 250
PL+ AG + S N E+ V +Q +
Sbjct: 471 LLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVD--- 527
Query: 251 SCWGGREQRCICVVS-HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTC 309
G R I VVS + QV LRQ L R ++ + S + GR+ V+LS V +
Sbjct: 528 ---AGVPARDIAVVSPYNLQVDLLRQSLVHRH-PELEIKSVDGFQGREKEAVILSFVRSN 583
Query: 310 QSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVER 369
+ G + F + R +N +TRA+ + V+ D+ + + L E F + R
Sbjct: 584 RK----GEVG--FLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVR 637
Query: 370 HSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKA 429
+ E ++ V P + + G+ AA +P G + T +
Sbjct: 638 -------TAFEYLDDIV------PENYSHENSQGSSHAATKPQGPATSTR----TGSQRQ 680
Query: 430 EPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEA 485
E G EA +PA + ++ A+ AP+ ++ G G + GV+ A
Sbjct: 681 EGGQEAAAPARQGRKKPAGKSLASEAPSQPSLN-----GGSPEGVESQDGVDHFRA 731
>gi|113722133 senataxin [Homo sapiens]
Length = 2677
Score = 109 bits (273), Expect = 2e-23
Identities = 135/530 (25%), Positives = 229/530 (43%), Gaps = 107/530 (20%)
Query: 1602 VIQGPPGTGK--TIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDV 1659
+I GPPGTGK TIVGL + + Q + ++ +L C PSN +VD
Sbjct: 1960 LIHGPPGTGKSKTIVGL----LYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2015
Query: 1660 LAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLR---SITLHH 1716
L ++++ L+ + E+ + + P+ G L+R P + ++ L+ ++H
Sbjct: 2016 L----MKKIILE----FKEKCKDKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNH 2067
Query: 1717 RIRQAPNPYSSEIKAFDTR-----------------------LQRGELFS--------RE 1745
R+++ S ++A R +QR EL R+
Sbjct: 2068 RMKKE---LPSHVQAMHKRKEFLDYQLDELSRQRALCRGGREIQRQELDENISKVSKERQ 2124
Query: 1746 DLVW-YKKVLWEARKFE----LDRHEVILCTCSCAASASLKILDVRQ-------ILVDEA 1793
+L K+V +K + L+ H +I CT S + L+ Q ++VDEA
Sbjct: 2125 ELASKIKEVQGRPQKTQSIIILESH-IICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEA 2183
Query: 1794 GMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERY----HEDA 1849
G + E ETL PL+ + K++L+GD KQL P V + + Q G D+S+ R+ E+
Sbjct: 2184 GQSCEIETLTPLIH--RCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENV 2241
Query: 1850 H----------MLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKESCP-V 1898
L QYRMH IC FPS Y LKT R+ ++ + P +
Sbjct: 2242 EHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKT---NRQTEAIRCSSDWPFQPYL 2298
Query: 1899 IFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGR-TVEPQDIAVLTPYNA 1957
+F G ER + +S N++E+ V+ I K + R V ++I ++T Y A
Sbjct: 2299 VFDVGDGSERR--------DNDSYINVQEIKLVMEIIKLIKDKRKDVSFRNIGIITHYKA 2350
Query: 1958 QASEISKALRRE--GIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKF 2015
Q + I K L +E V ++ QG + V+V+ VR + ++
Sbjct: 2351 QKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRA------------NSIQGS 2398
Query: 2016 LGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV 2065
+GF+ ++NV +TRA+ L ++G L W L+ + + ++
Sbjct: 2399 IGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAII 2448
Score = 55.5 bits (132), Expect = 5e-07
Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 26/290 (8%)
Query: 92 FSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSV-ARARAAEHTLLHR 150
FS +++DEA Q E E LTPL + + +L+L GD Q+ P + S+ A+ + +++ R
Sbjct: 2175 FSCVIVDEAGQSCEIETLTPLIHRCN--KLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 151 LFLCYQQ--ETHEVARQSRLVFHENYRCTDAIVSFISRHFY---VAKGNPIHARGKVPPH 205
++ E + ++R L YR I F S + Y + A
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDW 2292
Query: 206 PRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS 265
P L+F GS RD S++N+ EI V+E ++ + R I +++
Sbjct: 2293 PFQPYLVFDVGDGSERRDND--SYINVQEIKLVMEIIKLIKDKRKDV----SFRNIGIIT 2346
Query: 266 H-GAQVSALRQELRRR--DLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEF 322
H AQ + ++++L + G V + + GRQ V+++ V S G F
Sbjct: 2347 HYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIG-----F 2401
Query: 323 FTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSV 372
+ LN +TRA+ L ++G L + W I++ +R ++
Sbjct: 2402 LASLQRLNVTITRAKYSLFILGHLRTLME----NQHWNQLIQDAQKRGAI 2447
>gi|134288890 DIS3 mitotic control homolog (S. cerevisiae)-like 2
[Homo sapiens]
Length = 885
Score = 102 bits (254), Expect = 4e-21
Identities = 139/519 (26%), Positives = 215/519 (41%), Gaps = 76/519 (14%)
Query: 695 LFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITKVLQKY 754
LF +IV W++ + LG + + L +A E + EY + + + Q
Sbjct: 300 LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGL 359
Query: 755 HTELG-RVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGP-RCEVAVHITDVASFVPR 812
+ +R D R FT+DP A +LDDALS + L +V VHI DV+ FVP
Sbjct: 360 PWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPE 419
Query: 813 DGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTMEKASGQLK 872
LD A + + Y ++ VPMLP LC+++ SL P D+L S+ T+ G++
Sbjct: 420 GSDLDKVAAERATSVYLV-QKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTL-TPEGKIL 477
Query: 873 SLRFAPSVVQSDRQLSYEEAEEVIRQ--HPGAGRELPA-----RLDSVDACVVAACYFSR 925
F ++++S +LSYE A+ +I +ELP + V V+ ++
Sbjct: 478 DEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKELPPISPEHSSEEVHQAVLNLHGIAK 537
Query: 926 LLRRHR-----LRSDCFYEQPDEDGTLGF-RAAHIMVKEYMIQFNRLVAEFLVGSECTRT 979
LR+ R LR D D G + HI EY + N+LV EF++ +
Sbjct: 538 QLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIY--EYR-ESNKLVEEFMLLAN---- 590
Query: 980 VTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQF 1039
A+ K P L H PP TR+ L V+F
Sbjct: 591 ---------------MAVAHKIHRAFPEQALLRRH------PPPQTRM-----LSDLVEF 624
Query: 1040 AARTQDYEQM---VDLVTTDDMHPFLAPAGRDLRKALERSAF--GRCARGHQQ------- 1087
+QM VD + ++ L D + +L R C+R Q
Sbjct: 625 C------DQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSG 678
Query: 1088 ------QGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARD-IDGLCQA 1140
Q HY+L V YT TSPIRR+ DV++ R + ALG+ A D +
Sbjct: 679 LLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGYRERLDMAPDTLQKQADH 738
Query: 1141 FSLQHALAQSYQRRARSLHLAVQLK-AQPLDKLGFVVDV 1178
+ + ++ Q + SL AV +K + PL+ V+ +
Sbjct: 739 CNDRRMASKRVQELSTSLFFAVLVKESGPLESEAMVMGI 777
>gi|122937299 DNA replication helicase 2 homolog [Homo sapiens]
Length = 1146
Score = 90.1 bits (222), Expect = 2e-17
Identities = 93/348 (26%), Positives = 155/348 (44%), Gaps = 43/348 (12%)
Query: 1742 FSREDLVWYKKVLWEARKFELDRHEVILCTCSCAASA---SLKILDVRQILVDEAGMATE 1798
F+ +++ K + A EL ++I+ T + S KI D +VDEA ++
Sbjct: 798 FTEQEICRSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKIFDF--CIVDEASQISQ 855
Query: 1799 PETLIPLVQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAH---MLDTQ 1855
P L PL + + VL+GDH+QL P+V N + LG+ SLF+R ++ L Q
Sbjct: 856 PICLGPLFF---SRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQ 912
Query: 1856 YRMHEGICAFPSVAFYKSKLKTWQ--------GLRRPPSVL----GHAGKESCPVIFGHV 1903
YRM+ I + + Y+ KL+ LR V +A P + G
Sbjct: 913 YRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVF 972
Query: 1904 QGHERSLLVSTD------EGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNA 1957
+ + ++TD + + +N+ E +V +T + + P DI ++ PY
Sbjct: 973 EPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLT-SIFVKAGCSPSDIGIIAPYRQ 1031
Query: 1958 QASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLG 2017
Q I+ L R I V V+++ K QG + VLVS VR+ + + K W
Sbjct: 1032 QLKIINDLLAR-SIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGEL-LKDW------ 1083
Query: 2018 FVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV 2065
++NVA+TRA+ L L+G L C P LL+ +++ ++
Sbjct: 1084 -----RRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLII 1126
Score = 50.4 bits (119), Expect = 2e-05
Identities = 68/317 (21%), Positives = 127/317 (40%), Gaps = 44/317 (13%)
Query: 68 ELARHRVVVTTTSQARELRVPV---GFFSHILIDEAAQMLECEALTPLAYASHGTRLVLA 124
EL +++V TT + P+ F ++DEA+Q+ + L PL ++ R VL
Sbjct: 817 ELYNSQLIVATTCMG--INHPIFSRKIFDFCIVDEASQISQPICLGPLFFSR---RFVLV 871
Query: 125 GDHMQVTPRLFS-VARARAAEHTLLHR----------LFLCYQQETHEVARQSRLVFHEN 173
GDH Q+ P + + ARA +L R L + Y+ + ++ ++L +
Sbjct: 872 GDHQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGK 931
Query: 174 YRC-----TDAIVSF-------ISRHFYVAKGNPIHARGKVPPHPRHYPLMFCHVAGSPD 221
C +A+++ + FY + G P + P+ F + P
Sbjct: 932 LECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEP---NNPVCFLNTDKVPA 988
Query: 222 RDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVSHGAQVSALRQELRRRD 281
+ + ++ V E + T G I +++ Q + +L R
Sbjct: 989 PEQ-----VEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARS 1043
Query: 282 LGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLV 341
+G V V + + GR +V++S V + + E D R LN +TRA+ +L+
Sbjct: 1044 IGMVEVNTVDKYQGRDKSIVLVSFVRS-----NKDGTVGELLKDWRRLNVAITRAKHKLI 1098
Query: 342 VVGDAVALCSFGACGKL 358
++G +L + KL
Sbjct: 1099 LLGCVPSLNCYPPLEKL 1115
>gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens]
Length = 1918
Score = 79.0 bits (193), Expect = 5e-14
Identities = 84/300 (28%), Positives = 135/300 (45%), Gaps = 37/300 (12%)
Query: 1780 LKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNERL-QNLGLD 1838
L+ ++ R ++V+EA E T+ L + + ++L+GDH+QLRP L +N L+
Sbjct: 995 LQKVEPRIVIVEEAAEVLEAHTIATLSK--ACQHLILIGDHQQLRPSANVYDLAKNFNLE 1052
Query: 1839 RSLFERYHE---DAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKE- 1894
SLFER + L+ Q+RM I + Y Q L PSVL + +
Sbjct: 1053 VSLFERLVKVNIPFVRLNYQHRMCPEIARLLTPHIY-------QDLENHPSVLKYEKIKG 1105
Query: 1895 -SCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLT 1953
S + F E+ + EG S N E VV + K L + P I +LT
Sbjct: 1106 VSSNLFFVEHNFPEQEI----QEGK--SHQNQHEAHFVVELCKYF-LCQEYLPSQITILT 1158
Query: 1954 PYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLK 2013
Y Q + K + + AGV V + K QG E +L+S VR+ +
Sbjct: 1159 TYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGK----------- 1207
Query: 2014 KFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQVRVC 2073
+GF+ N++ VA++RA++G+ IG+ +L PLW ++ + P +R+C
Sbjct: 1208 --VGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGP--MLRLC 1263
Score = 44.7 bits (104), Expect = 0.001
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 1583 KLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIV 1619
KL+ SQ A++ AL + +IQGPPGTGKT VGL IV
Sbjct: 597 KLDDSQMEALQFALTRELAIIQGPPGTGKTYVGLKIV 633
Score = 34.3 bits (77), Expect = 1.3
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 95 ILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTP--RLFSVARARAAEHTLLHRL 151
++++EAA++LE + L+ A L+L GDH Q+ P ++ +A+ E +L RL
Sbjct: 1003 VIVEEAAEVLEAHTIATLSKACQ--HLILIGDHQQLRPSANVYDLAKNFNLEVSLFERL 1059
>gi|38788372 aquarius [Homo sapiens]
Length = 1485
Score = 59.3 bits (142), Expect = 4e-08
Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 44/304 (14%)
Query: 1766 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLVQ------FPQAEKVV 1815
++I TC+ AA ++ + IL++EA E ET IPL+ F + ++ +
Sbjct: 1033 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1092
Query: 1816 LLGDHKQLRPVVKNERLQNL-GLDRSLFERYHE---DAHMLDTQYRMHEGICAFPSVAFY 1871
++GDH QL PV+KN Q +++SLF R+ LD Q R +C Y
Sbjct: 1093 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC-----NLY 1147
Query: 1872 KSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEV 1931
+ K L + + + + + E V E N NL E V
Sbjct: 1148 NWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYV 1207
Query: 1932 VRITKQLTLGRTVEPQD-IAVLTPYNAQASEISKALRR----EGIAG--VAVSSITKSQG 1984
V + + L P D I++LT YN Q I + R + G V+++ + QG
Sbjct: 1208 VALFMYMCL--LGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQG 1265
Query: 1985 SEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLL 2044
+ Y+L+S VRT A +G + D ++ VA++RA+ GL + L
Sbjct: 1266 QQNDYILLSLVRTRA----------------VGHLRDVRRLVVAMSRARLGLYIFARVSL 1309
Query: 2045 LRCC 2048
+ C
Sbjct: 1310 FQNC 1313
Score = 34.7 bits (78), Expect = 1.0
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 1587 SQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQ 1629
+Q A+R ++ T++ GPPGTGKT V + I+ + + EQ
Sbjct: 805 TQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQ 847
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 37.4 bits (85), Expect = 0.15
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 26/209 (12%)
Query: 416 AEEQAAV---VTAMVKAEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAA 472
A E+A + + A KA G S + + A A AG + GA A
Sbjct: 1865 AGEEAMICSRIEAENKASSGSWIRSEEVAYMGSCVGAEAGAGAEAGAGAEAGAGAGA-EA 1923
Query: 473 GAAAAAGVESTEAEDAEADFWPWDGELNADDAIL---RELLDESQKVMVTVGEDGLLDTV 529
GA A AG + ++ A W WDG+ ++ L E ES + VGED L
Sbjct: 1924 GAEAGAGAGAGPGTESGAGVWSWDGDATTVESRLGAGEEAGVESWTLARNVGEDEL---- 1979
Query: 530 ARPESLQQARLYENLPPAALRKLLHAEPER---YRHCSFVPETFERASAIPLDDAS-SGP 585
+R S ++ +LR L AE E +R S +FE + D+ S
Sbjct: 1980 SRESS-------PDIEEISLRSLFWAESENSNTFRSKSGKDASFESGAG---DNTSIKDK 2029
Query: 586 IQVRGRLDCGMAF-AGDEVLVQLLSGDKA 613
+ G +D G F AG+E + S KA
Sbjct: 2030 FEAAGGVDIGSWFCAGNENTSEDKSAPKA 2058
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 37.0 bits (84), Expect = 0.20
Identities = 45/149 (30%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 351 SFGACGKLWESFIRECVERHSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGA-AGNWEAAP 409
S A G++ +S E SV EG + VE G G +AG AG+ A
Sbjct: 219 SVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEAGDPAGD-----GVEAGVPAGDSVEAE 273
Query: 410 EPVGDLAEEQAAVVTAM-VKAEP---GDEALSPASRDITATTAQTEAAAAP---AGDAVK 462
P GD + + A V EP GD +LSP + I ++ A +P A DA +
Sbjct: 274 GPAGDSMDAEGPAGRARRVSGEPQQSGDGSLSPQAEAIEVAAGES-AGRSPGELAWDAAE 332
Query: 463 EDVVPGACAAGAAAAAGVESTEAEDAEAD 491
E VPG + AA + ED D
Sbjct: 333 EAEVPGVKGSEEAAPGDARADAGEDRVGD 361
Score = 31.6 bits (70), Expect = 8.5
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 384 QGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAE-EQAAVVTAMVKAEPGD--EALSPA- 439
Q A++R P G+ +G AG+ A P+GD E E A + + GD +A PA
Sbjct: 138 QEEAEQRPEVPEGSASGEAGDSVDAEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAEGPAG 197
Query: 440 -SRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEAD 491
S D A PAGD+V + G + A AG +S +AE D
Sbjct: 198 DSVDAEGPLGDNIQAEGPAGDSVDAEGRVGD-SVDAEGPAG-DSVDAEGRVGD 248
>gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens]
Length = 274
Score = 35.8 bits (81), Expect = 0.45
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 374 PEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPV----GDLAEEQAAV-VTAMVK 428
P +E+ +G P G++ G P GD A EQAA A +
Sbjct: 109 PVADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAPQAPASSE 168
Query: 429 AEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAE 486
+ G A++ T + ++A APA + K+ VP A A AA E A+
Sbjct: 169 EKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAEDAAAK 226
>gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens]
Length = 238
Score = 35.8 bits (81), Expect = 0.45
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 374 PEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPV----GDLAEEQAAV-VTAMVK 428
P +E+ +G P G++ G P GD A EQAA A +
Sbjct: 73 PVADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAPQAPASSE 132
Query: 429 AEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAE 486
+ G A++ T + ++A APA + K+ VP A A AA E A+
Sbjct: 133 EKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAEDAAAK 190
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 35.0 bits (79), Expect = 0.77
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 375 EGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDE 434
+GL+ ++EQ P R Q A + P P G + VT +++A PG
Sbjct: 146 KGLAAHRLEQCEV-----PEREEQEQQAEVSKPTPTPEG--TSQDVTTVTLLLRAPPGST 198
Query: 435 ALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGA 469
+ SPAS + T A E PA VPG+
Sbjct: 199 SSSPASPSSSPTPASPEPPLEPAEAQCLTAEVPGS 233
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 35.0 bits (79), Expect = 0.77
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 375 EGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDE 434
+GL+ ++EQ P R Q A + P P G + VT +++A PG
Sbjct: 146 KGLAAHRLEQCEV-----PEREEQEQQAEVSKPTPTPEG--TSQDVTTVTLLLRAPPGST 198
Query: 435 ALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGA 469
+ SPAS + T A E PA VPG+
Sbjct: 199 SSSPASPSSSPTPASPEPPLEPAEAQCLTAEVPGS 233
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 35.0 bits (79), Expect = 0.77
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 375 EGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDE 434
+GL+ ++EQ P R Q A + P P G + VT +++A PG
Sbjct: 146 KGLAAHRLEQCEV-----PEREEQEQQAEVSKPTPTPEG--TSQDVTTVTLLLRAPPGST 198
Query: 435 ALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGA 469
+ SPAS + T A E PA VPG+
Sbjct: 199 SSSPASPSSSPTPASPEPPLEPAEAQCLTAEVPGS 233
>gi|115527120 nebulin [Homo sapiens]
Length = 6669
Score = 34.3 bits (77), Expect = 1.3
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 1312 DTLQVQLGTSLQHGFLVPSPQLWTVAPGF----SLCLEHVERPGDCFSGRVYRAPRDRYR 1367
D +Q + LQ + S W G+ S+ +E V+R G+ S R YR P D+ +
Sbjct: 3611 DVIQARKAYDLQSDAIYKSDLEWLRGIGWVPIGSVEVEKVKRAGEILSDRKYRQPADQLK 3670
Query: 1368 DVDEYACVWEPFCALESATGAVAENDSVTL-QHL-SVSWEASRT 1409
C ++ +A+N+++T+ +HL + +W+A +T
Sbjct: 3671 FT----------CITDTPEIVLAKNNALTMSKHLYTEAWDADKT 3704
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 33.9 bits (76), Expect = 1.7
Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Query: 364 RECVERHSVCPEGLSMEQV-EQGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAV 422
+E E+ EG + E+ E+ A + P+ G EA EP +EQAA
Sbjct: 52 KEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAA- 110
Query: 423 VTAMVKAEPGDEALSPASRDITATTAQTEAAAAPAG-DAVKEDVVPGACAAGAAAAAGVE 481
PG A A + A A E+AA AG + KE+ P A AA AA +
Sbjct: 111 --------PGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAA--Q 160
Query: 482 STEAEDAEA 490
T+++ A A
Sbjct: 161 ETKSDGAPA 169
Score = 33.5 bits (75), Expect = 2.2
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 384 QGVAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDI 443
+G A+ + PP+ A +AAP P E A A AE A
Sbjct: 91 EGAAEAKAEPPK-----APEQEQAAPGPAAG-GEAPKAAEAAAAPAESAAPAAGEEPSKE 144
Query: 444 TATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDA 488
+TEA AAPA K D P + + ++ A S E A
Sbjct: 145 EGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKETPAA 189
>gi|24308527 stereocilin [Homo sapiens]
Length = 1775
Score = 33.9 bits (76), Expect = 1.7
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
Query: 563 CSFVPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRV 622
C PE E S +PL D + GP++ RG L+C +G +PEGR+ +
Sbjct: 934 CFLSPE--ELQSLVPLSDPT-GPVE-RGLLECAA------------NGTLSPEGRVAYEL 977
Query: 623 LGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDP 665
LGVL+ + + + R+ P+ + F+ EL +P
Sbjct: 978 LGVLRSSGGAV-----LSPRELRVWAPLFSQLGLRFLQELSEP 1015
>gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 33.5 bits (75), Expect = 2.2
Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 28/135 (20%)
Query: 1441 IRLEGLPAPTASPRPGPSSL---GPGLNVDPGTY--TWVAHGQTQD-----WDQERRA-- 1488
++L+GLP P +PGP+ G G+ P + W GQ W+ + A
Sbjct: 272 LQLDGLPGPCTVGQPGPAQARPQGQGVLAIPASQGSPWWGWGQGPQVARAAWEPQAGAAP 331
Query: 1489 DRQEAPRRVHLFVHHMGMEKVPEEVLR-PG-------------TLFTVELLPKQLPDLRK 1534
RQ AP + M VP EVL+ PG L + E L + LP L
Sbjct: 332 PRQPAPPEASAWQGQMQGIPVPTEVLQEPGRSSALPSGLLLHELLVSQEFLQQGLPFLET 391
Query: 1535 EE--AVRGLEEASPL 1547
E + LEEA+ L
Sbjct: 392 EAPGELEALEEAASL 406
>gi|7657455 pescadillo homolog 1, containing BRCT domain [Homo
sapiens]
Length = 588
Score = 33.5 bits (75), Expect = 2.2
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 448 AQTEAAAAPAGDAV-KEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAIL 506
AQ EA A A+ E + A A+ A V E+AE D +P DGE++A +
Sbjct: 254 AQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEFPTDGEMSAQEEDR 313
Query: 507 RELLDESQK 515
R+ L+ +K
Sbjct: 314 RKELEAQEK 322
>gi|5031579 A-kinase anchor protein 8 [Homo sapiens]
Length = 692
Score = 33.5 bits (75), Expect = 2.2
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 403 GNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEAL------SPASRDITATTAQTEAAAAP 456
G APE G+ AE++ TA ++P E L + + A++EAA A
Sbjct: 591 GEGAPAPESSGEPAEDEGPTDTAEAGSDPQAEQLLEEQVPCGTAHEKGVPKARSEAAEAG 650
Query: 457 AG----DAVKEDVVPGACAAGAAAAAGVESTEAEDAEA 490
G A E A AAA A VE T+AE +A
Sbjct: 651 NGAETMAAEAESAQTRVAPAPAAADAEVEQTDAESKDA 688
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,650,354
Number of Sequences: 37866
Number of extensions: 4312711
Number of successful extensions: 12259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 12022
Number of HSP's gapped (non-prelim): 179
length of query: 2080
length of database: 18,247,518
effective HSP length: 118
effective length of query: 1962
effective length of database: 13,779,330
effective search space: 27035045460
effective search space used: 27035045460
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.