C17orf80 5685

Name: C17orf80	Sequence: fasta or formatted (583aa)		NCBI GI: 154800469
Description: lung cancer-related protein 8 isoform c		Referenced in: Lung
Other entries for this name: alt prot [573aa] lung cancer-related protein 8 isoform b alt prot [609aa] lung cancer-related protein 8 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 28 4 C cysteine 2.6 15 2 D aspartate 3.6 21 1 E glutamate 6.9 40 2 F phenylalanine 2.9 17 1 G glycine 6.2 36 2 H histidine 1.9 11 1 I isoleucine 2.9 17 1 K lysine 9.4 55 2 L leucine 9.9 58 2 M methionine 2.6 15 1 N asparagine 3.4 20 1 P proline 7.2 42 2 Q glutamine 5.5 32 1 R arginine 5.1 30 2 S serine 10.3 60 3 T threonine 7.7 45 2 V valine 4.6 27 2 W tryptophan 0.9 5 1 Y tyrosine 1.5 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lung cancer-related protein 8 isoform c C17orf80 0.988 lung cancer-related protein 8 isoform a C17orf80 0.914 lung cancer-related protein 8 isoform b ATP5J2 0.015 ATP synthase, H+ transporting, mitochondrial F0 compl... ATP5J2 0.014 ATP synthase, H+ transporting, mitochondrial F0 comp... NEFH 0.012 neurofilament, heavy polypeptide 200kDa MAP1B 0.010 microtubule-associated protein 1B LIG1 0.009 DNA ligase I SLC3A2 0.009 solute carrier family 3, member 2 isoform c C22orf30 0.009 hypothetical protein LOC253143 PHACTR2 0.009 phosphatase and actin regulator 2 isoform 3 PHACTR2 0.009 phosphatase and actin regulator 2 isoform 1 SLC3A2 0.008 solute carrier family 3, member 2 isoform d BDP1 0.008 transcription factor-like nuclear regulator CDC42BPA 0.008 CDC42-binding protein kinase alpha isoform B CDC42BPA 0.008 CDC42-binding protein kinase alpha isoform A CHD9 0.008 chromodomain helicase DNA binding protein 9 HMHA1 0.007 minor histocompatibility antigen HA-1 MTDH 0.007 metadherin CAST 0.007 calpastatin isoform g CAST 0.007 calpastatin isoform a CENPF 0.007 centromere protein F BTBD12 0.007 BTB (POZ) domain containing 12 AKAP6 0.007 A-kinase anchor protein 6 MAMLD1 0.007 mastermind-like domain containing 1 TNRC18 0.006 trinucleotide repeat containing 18 ARHGAP26 0.006 GTPase regulator associated with the focal adhesion k... ZAN 0.006 zonadhesin isoform 3 ZAN 0.006 zonadhesin isoform 6 DPCR1 0.006 diffuse panbronchiolitis critical region 1 protein ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.