Guide to the Human Genome
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Name: ATP6V0E2 Sequence: fasta or formatted (213aa) NCBI GI: 154689796
Description:

ATPase, H+ transporting, V0 subunit isoform 2

Referenced in:

Kidney
Lysosomes and Related Organelles

Other entries for this name:
alt prot [130aa] ATPase, H+ transporting, V0 subunit isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         19           2
 C cysteine            3.3          7           2
 D aspartate           1.9          4           1
 E glutamate           0.5          1           1
 F phenylalanine       2.3          5           1
 G glycine            11.7         25           1
 H histidine           1.9          4           1
 I isoleucine          3.3          7           2
 K lysine              0.9          2           1
 L leucine            15.0         32           3
 M methionine          2.8          6           1
 N asparagine          0.5          1           1
 P proline            12.2         26           1
 Q glutamine           4.2          9           1
 R arginine            5.2         11           1
 S serine             10.8         23           2
 T threonine           5.2         11           2
 V valine              6.1         13           1
 W tryptophan          2.3          5           1
 Y tyrosine            0.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, H+ transporting, V0 subunit isoform 2 [Homo... 
ATP6V0E2              0.439   ATPase, H+ transporting, V0 subunit isoform 1 [Homo...
ATP6V0E1              0.130   ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e...
LOC100292475          0.077   PREDICTED: similar to ATPase, H+ transporting, lyso...
LOC100291038          0.077   PREDICTED: hypothetical protein XP_002346425 
LOC100287946          0.077   PREDICTED: hypothetical protein XP_002342123 
NKX1-1                0.027   PREDICTED: NK1 homeobox 1 
MAFF                  0.019   transcription factor MAFF isoform b 
MAFF                  0.019   transcription factor MAFF isoform a 
MAFF                  0.019   transcription factor MAFF isoform a 
MAFF                  0.019   transcription factor MAFF isoform a 
LOC400558             0.019   PREDICTED: hypothetical protein LOC400558 
LOC400558             0.019   PREDICTED: hypothetical protein LOC400558 
LOC400558             0.017   PREDICTED: hypothetical protein LOC400558 
C6orf132              0.017   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.017   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.017   PREDICTED: hypothetical protein LOC647024 
GPR179                0.017   GPR158-like 1 
MICALL1               0.017   molecule interacting with Rab13 
LOC100130655          0.017   PREDICTED: hypothetical protein 
GRIN2C                0.017   N-methyl-D-aspartate receptor subunit 2C precursor [...
ZNF828                0.017   zinc finger protein 828 
GPR20                 0.017   G protein-coupled receptor 20 
PRDM1                 0.014   PR domain containing 1, with ZNF domain isoform 1 [...
PRDM1                 0.014   PR domain containing 1, with ZNF domain isoform 2 [H...
GPR143                0.014   G protein-coupled receptor 143 
LGALS3                0.014   galectin 3 
ZXDC                  0.014   ZXD family zinc finger C isoform 2 
ZXDC                  0.014   ZXD family zinc finger C isoform 1 
PHC2                  0.014   polyhomeotic-like 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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