Guide to the Human Genome
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Name: ZXDC Sequence: fasta or formatted (858aa) NCBI GI: 98961133
Description:

ZXD family zinc finger C isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [710aa] ZXD family zinc finger C isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         84           3
 C cysteine            2.9         25           2
 D aspartate           4.1         35           3
 E glutamate           4.8         41           1
 F phenylalanine       3.4         29           1
 G glycine            10.3         88           3
 H histidine           3.7         32           1
 I isoleucine          1.6         14           1
 K lysine              4.2         36           2
 L leucine             9.6         82           3
 M methionine          1.0          9           1
 N asparagine          2.1         18           2
 P proline            10.0         86           3
 Q glutamine           4.7         40           2
 R arginine            5.6         48           3
 S serine             10.8         93           3
 T threonine           5.0         43           2
 V valine              5.0         43           2
 W tryptophan          0.3          3           1
 Y tyrosine            1.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ZXD family zinc finger C isoform 1 
ZXDC                  0.827   ZXD family zinc finger C isoform 2 
ZXDB                  0.459   zinc finger, X-linked, duplicated B 
ZXDA                  0.458   zinc finger, X-linked, duplicated A 
ZNF782                0.089   zinc finger protein 782 
ZNF235                0.088   zinc finger protein 93 homolog 
ZNF629                0.083   zinc finger protein 629 
ZNF182                0.082   zinc finger protein 21 isoform 2 
ZNF182                0.082   zinc finger protein 21 isoform 1 
ZNF408                0.082   zinc finger protein 408 
ZNF41                 0.081   zinc finger protein 41 
ZNF41                 0.081   zinc finger protein 41 
ZNF180                0.081   zinc finger protein 180 
ZNF425                0.081   zinc finger protein 425 
LOC100287429          0.080   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.080   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.080   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.080   zinc finger protein 84 
ZNF84                 0.080   zinc finger protein 84 
ZNF681                0.080   zinc finger protein 681 
ZFP37                 0.079   zinc finger protein 37 homolog 
ZFP62                 0.079   zinc finger protein 62 homolog 
ZNF143                0.079   zinc finger protein 143 
ZNF333                0.079   zinc finger protein 333 
ZNF544                0.079   zinc finger protein 544 
ZNF658                0.079   zinc finger protein 658 
ZNF267                0.078   zinc finger protein 267 
ZNF568                0.078   zinc finger protein 568 
ZNF835                0.078   zinc finger protein 835 
ZNF774                0.078   zinc finger protein 774 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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