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Search of human proteins with 153791218
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153791218 hypothetical protein LOC115749 [Homo sapiens]
(462 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153791218 hypothetical protein LOC115749 [Homo sapiens] 905 0.0
gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 ... 35 0.14
gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 K... 35 0.14
gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens] 34 0.24
gi|31982906 cingulin-like 1 [Homo sapiens] 32 0.93
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 32 1.2
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 32 1.2
gi|117647226 RNA (guanine-9-) methyltransferase domain containin... 32 1.6
gi|148792970 TAF4b RNA polymerase II, TATA box binding protein (... 31 2.7
gi|157785668 coiled-coil domain containing 39 [Homo sapiens] 30 3.5
gi|28872812 MORC family CW-type zinc finger 3 [Homo sapiens] 30 4.6
gi|126032350 protein kinase, DNA-activated, catalytic polypeptid... 30 6.0
gi|13654237 protein kinase, DNA-activated, catalytic polypeptide... 30 6.0
gi|239757430 PREDICTED: similar to lactation elevated 1 (predict... 30 6.0
gi|113430845 PREDICTED: similar to protein kinase, DNA-activated... 30 6.0
gi|239751946 PREDICTED: hypothetical protein XP_002348046 [Homo ... 30 6.0
gi|239746429 PREDICTED: hypothetical protein XP_002344210 [Homo ... 30 6.0
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 30 6.0
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 30 6.0
gi|148664197 coiled-coil domain containing 40 [Homo sapiens] 30 6.0
gi|23503243 Ras association (RalGDS/AF-6) domain family (N-termi... 30 6.0
gi|203096856 kinesin family member 7 [Homo sapiens] 29 7.9
>gi|153791218 hypothetical protein LOC115749 [Homo sapiens]
Length = 462
Score = 905 bits (2338), Expect = 0.0
Identities = 462/462 (100%), Positives = 462/462 (100%)
Query: 1 MASPLPSGFPARRNSRLDVFLRRHLPPEVYDAVRAYEPCIVVSNSENHILKYVVLSDRLV 60
MASPLPSGFPARRNSRLDVFLRRHLPPEVYDAVRAYEPCIVVSNSENHILKYVVLSDRLV
Sbjct: 1 MASPLPSGFPARRNSRLDVFLRRHLPPEVYDAVRAYEPCIVVSNSENHILKYVVLSDRLV 60
Query: 61 YLTENPPKSIRRVVALRDVVAIDLIDDYPEFLSSPDREISQHIRIIYSSTVLKKECKKSN 120
YLTENPPKSIRRVVALRDVVAIDLIDDYPEFLSSPDREISQHIRIIYSSTVLKKECKKSN
Sbjct: 61 YLTENPPKSIRRVVALRDVVAIDLIDDYPEFLSSPDREISQHIRIIYSSTVLKKECKKSN 120
Query: 121 SVRKFLFPFHHTKANNKKVKEEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFL 180
SVRKFLFPFHHTKANNKKVKEEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFL
Sbjct: 121 SVRKFLFPFHHTKANNKKVKEEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFL 180
Query: 181 KDNSLRRILSLLMELKVAAQKNFILKRLFWKTSDLFYFIVNKLHEYLPESRDKNALQNQS 240
KDNSLRRILSLLMELKVAAQKNFILKRLFWKTSDLFYFIVNKLHEYLPESRDKNALQNQS
Sbjct: 181 KDNSLRRILSLLMELKVAAQKNFILKRLFWKTSDLFYFIVNKLHEYLPESRDKNALQNQS 240
Query: 241 QRVDELVACIEIIQTLVLMFRETETESSRLNTLAAKKGALFNLLVILISEPQIPKSCPVF 300
QRVDELVACIEIIQTLVLMFRETETESSRLNTLAAKKGALFNLLVILISEPQIPKSCPVF
Sbjct: 241 QRVDELVACIEIIQTLVLMFRETETESSRLNTLAAKKGALFNLLVILISEPQIPKSCPVF 300
Query: 301 DIQLVADSALVRMSFDAELQKLILEYTNTATALLYEILLVFQQGNLGLGSTKFAISWIMS 360
DIQLVADSALVRMSFDAELQKLILEYTNTATALLYEILLVFQQGNLGLGSTKFAISWIMS
Sbjct: 301 DIQLVADSALVRMSFDAELQKLILEYTNTATALLYEILLVFQQGNLGLGSTKFAISWIMS 360
Query: 361 FLQSCPPIITFVASIVKQVVRGLSASFQLLSPCQAVLLYQQFYILKSCLRHSRTLAEYIR 420
FLQSCPPIITFVASIVKQVVRGLSASFQLLSPCQAVLLYQQFYILKSCLRHSRTLAEYIR
Sbjct: 361 FLQSCPPIITFVASIVKQVVRGLSASFQLLSPCQAVLLYQQFYILKSCLRHSRTLAEYIR 420
Query: 421 NNYREEFRYFIHMPALQKRLPLCYPITQPTIQLFHEVLKLVE 462
NNYREEFRYFIHMPALQKRLPLCYPITQPTIQLFHEVLKLVE
Sbjct: 421 NNYREEFRYFIHMPALQKRLPLCYPITQPTIQLFHEVLKLVE 462
>gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
isoform 1 [Homo sapiens]
Length = 953
Score = 35.0 bits (79), Expect = 0.14
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 152 KESRSLKESPLRSEEKIKHF----SQLKSELFLKDNSLRRILSLLMELKVAAQKNFILKR 207
K++++L E EE+++H SQL+ EL +KD L+ S E + + + LKR
Sbjct: 138 KKNKTLTERNELLEEQVEHIREEVSQLRHELSMKDELLQFYTSAAEESEPESVCSTPLKR 197
Query: 208 LFWKTSDLFYFIVNKLHEYLPESRDKNAL--QNQSQRVDELVACIE----IIQTLVLMFR 261
+S YF ++ L + L + ++N + SQ E + E ++ V R
Sbjct: 198 NESSSSVQNYFHLDSLQKKLKDLEEENVVLRSEASQLKTETITYEEKEQQLVNDCVKELR 257
Query: 262 ETETESSRLNTLAAKK--------GALFNLLVILISEPQIPKSCPVFDIQLVADSALVR- 312
+ + + ++ AKK + +LL ++ + K+C V + +LV +
Sbjct: 258 DANVQIASISEELAKKTEDAARQQEEITHLLSQIVDLQKKAKACAVENEELVQHLGAAKD 317
Query: 313 --MSFDAELQKLILEY 326
AEL++L +Y
Sbjct: 318 AQRQLTAELRELEDKY 333
>gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
isoform 2 [Homo sapiens]
Length = 686
Score = 35.0 bits (79), Expect = 0.14
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 152 KESRSLKESPLRSEEKIKHF----SQLKSELFLKDNSLRRILSLLMELKVAAQKNFILKR 207
K++++L E EE+++H SQL+ EL +KD L+ S E + + + LKR
Sbjct: 80 KKNKTLTERNELLEEQVEHIREEVSQLRHELSMKDELLQFYTSAAEESEPESVCSTPLKR 139
Query: 208 LFWKTSDLFYFIVNKLHEYLPESRDKNAL--QNQSQRVDELVACIE----IIQTLVLMFR 261
+S YF ++ L + L + ++N + SQ E + E ++ V R
Sbjct: 140 NESSSSVQNYFHLDSLQKKLKDLEEENVVLRSEASQLKTETITYEEKEQQLVNDCVKELR 199
Query: 262 ETETESSRLNTLAAKK--------GALFNLLVILISEPQIPKSCPVFDIQLVADSALVR- 312
+ + + ++ AKK + +LL ++ + K+C V + +LV +
Sbjct: 200 DANVQIASISEELAKKTEDAARQQEEITHLLSQIVDLQKKAKACAVENEELVQHLGAAKD 259
Query: 313 --MSFDAELQKLILEY 326
AEL++L +Y
Sbjct: 260 AQRQLTAELRELEDKY 275
>gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens]
Length = 1260
Score = 34.3 bits (77), Expect = 0.24
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 158 KESPLRSEEKIKHFSQLKSELF----------LKDNSLRRILSLLMELKVAAQKNFILKR 207
KE+ L +E+ +K+ ++ F ++D+S + L+ L V++ KN I+K
Sbjct: 1115 KENNLENEKMVKNKPDFYTKAFRSLSEIHSPNIQDSSFDSVREGLVPLSVSSGKNVIIKE 1174
Query: 208 LFWKTSDLFYFIVNKLHEYLPESRDKNALQNQSQRVDELVAC-IEIIQTLVLMFRETETE 266
F + + + HE + + + K + Q +D C I ++ + L+ + +
Sbjct: 1175 NFALECSPAFQVSDDEHEKMNKMKFKVNRRTQKSGIDHYRTCQIPVLFQITLLNLKISQK 1234
Query: 267 SSRLNTLAAKKGALFNLLVILISE 290
N A ++G L ++L SE
Sbjct: 1235 IYLQNGQAEEEGVLLSILKSQASE 1258
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 32.3 bits (72), Expect = 0.93
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 135 NNKKVKEEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRRILSLLME 194
N + +KEE R + +L+E + EK++ S L+ L + LR+ L L +
Sbjct: 636 NQQNIKEE-------RERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQ 688
Query: 195 LKVAAQKNFILKRLFWKTSDLFYFIVNKLHEYL-----PESRDKNALQNQSQRVDELVAC 249
+K+ +++ + DL ++++H+ L E R+K AL ++EL+
Sbjct: 689 VKMEREQHQT------EIRDL-QDQLSEMHDELDSAKRSEDREKGAL------IEELLQA 735
Query: 250 IEIIQTLVLMFRETE-TESSRLNTLAAKKGAL 280
+ +Q L++ E E R L A KGAL
Sbjct: 736 KQDLQDLLIAKEEQEDLLRKRERELTALKGAL 767
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 32.0 bits (71), Expect = 1.2
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 151 SKESRSLKESPLRS---EEKIKHFSQLKSELFLKDNSLRRILSLLMELK 196
SKE S + P+ EEK++ +L++ L L+D +L++IL+L +K
Sbjct: 2269 SKEFVSFSDKPVDQIAVEEKLQKLQELENRLSLQDGTLKKILALAKSVK 2317
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 32.0 bits (71), Expect = 1.2
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 151 SKESRSLKESPLRS---EEKIKHFSQLKSELFLKDNSLRRILSLLMELK 196
SKE S + P+ EEK++ +L++ L L+D +L++IL+L +K
Sbjct: 2269 SKEFVSFSDKPVDQIAVEEKLQKLQELENRLSLQDGTLKKILALAKSVK 2317
>gi|117647226 RNA (guanine-9-) methyltransferase domain containing 1
[Homo sapiens]
Length = 403
Score = 31.6 bits (70), Expect = 1.6
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 97 REISQHIRIIYSSTVLKKECKKSNSVRKFLFPFHHTKANNKKVKEEKNGLAFWRSKESRS 156
RE+ +HI T++ EC + + +K+L + +TK KK ++ K + +E+++
Sbjct: 106 REVPEHITEEELKTLM--ECVSNTAKKKYL-KYLYTKEKVKKARQIKKEMKAAAREEAKN 162
Query: 157 LKESPLRSEEKIKHFSQLK 175
+K E+K K+F L+
Sbjct: 163 IKLLETTEEDKQKNFLFLR 181
Score = 29.3 bits (64), Expect = 7.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 162 LRSEEKIKHFSQLKSELFLKDNSLRRILSLLMELKVAAQKNFILKRLFWKTSDL 215
L ++EK+K Q+K E+ + + LL + QKNF+ RL+ + D+
Sbjct: 136 LYTKEKVKKARQIKKEMKAAAREEAKNIKLLETTEEDKQKNFLFLRLWDRNMDI 189
>gi|148792970 TAF4b RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 105kDa [Homo sapiens]
Length = 862
Score = 30.8 bits (68), Expect = 2.7
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 99 ISQHIRIIYSSTVLKKECKKSNSVRKFLFPFHHTKANNKKVKEEKNGLAFWRSKESRSLK 158
I+QH Y ++ C + S KFL + K ++E + L ++ +SRS K
Sbjct: 702 IAQHRMTTYKASENYILCSDTRSQLKFLEKLDQLEKQRKDLEEREMLL---KAAKSRSNK 758
Query: 159 ESP--LRSEEKIKHFSQLK 175
E P LR ++K K QL+
Sbjct: 759 EDPEQLRLKQKAKELQQLE 777
>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
Length = 941
Score = 30.4 bits (67), Expect = 3.5
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 136 NKKVKEEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRRILSLLMEL 195
NK ++++ + L R+ L+E R HF +K EL S+ + L E
Sbjct: 24 NKLLEDQLSKLKDERASLQDELREYEERINSMTSHFKNVKQEL-----SITQSLCKARER 78
Query: 196 KVAAQKNF--ILKRLFWKTSDLFYFIVNKLHEYLPESRDK-NALQNQSQRVDEL 246
+ ++++F I +R + D + N++ L + DK N + +Q++D L
Sbjct: 79 ETESEEHFKAIAQRELGRVKDEIQRLENEMASILEKKSDKENGIFKATQKLDGL 132
>gi|28872812 MORC family CW-type zinc finger 3 [Homo sapiens]
Length = 939
Score = 30.0 bits (66), Expect = 4.6
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 AIDLIDDYPEFLSSPDREISQHIRIIYSSTVLKKECKKSNSVRKFLFPFHHTKANNKKVK 140
A+ L++ SPD +SQ+ + + LKK+C V+ ++ +N + K
Sbjct: 752 AVFLLESINGKSESPDHMVSQYQQALEEIERLKKQCSALQHVKA-----ECSQCSNNESK 806
Query: 141 EEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRRILSLLMELKVAAQ 200
E + +A R L + + + Q KSE+ L + +I S ELK +
Sbjct: 807 SEMDEMAVQLDDVFRQLDKCSIERD-------QYKSEVELLEMEKSQIRSQCEELKTEVE 859
Query: 201 K 201
+
Sbjct: 860 Q 860
>gi|126032350 protein kinase, DNA-activated, catalytic polypeptide
isoform 2 [Homo sapiens]
Length = 4097
Score = 29.6 bits (65), Expect = 6.0
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 141 EEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRRI----LSLLMELK 196
+EK L + R + +E ++SE K+K +Q+ + L I SL+ L+
Sbjct: 2736 QEKLSLMYARKGVAEQKREKEIKSELKMKQDAQVVLYRSYRHGDLPDIQIKHSSLITPLQ 2795
Query: 197 VAAQKN-FILKRLFWKTSDLFYFIVNKLHEYLPESRDKNALQNQSQ 241
AQ++ I K+LF S LF I+ ++ ++ S N Q Q
Sbjct: 2796 AVAQRDPIIAKQLF---SSLFSGILKEMDKFKTLSEKNNITQKLLQ 2838
>gi|13654237 protein kinase, DNA-activated, catalytic polypeptide
isoform 1 [Homo sapiens]
Length = 4128
Score = 29.6 bits (65), Expect = 6.0
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 141 EEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRRI----LSLLMELK 196
+EK L + R + +E ++SE K+K +Q+ + L I SL+ L+
Sbjct: 2736 QEKLSLMYARKGVAEQKREKEIKSELKMKQDAQVVLYRSYRHGDLPDIQIKHSSLITPLQ 2795
Query: 197 VAAQKN-FILKRLFWKTSDLFYFIVNKLHEYLPESRDKNALQNQSQ 241
AQ++ I K+LF S LF I+ ++ ++ S N Q Q
Sbjct: 2796 AVAQRDPIIAKQLF---SSLFSGILKEMDKFKTLSEKNNITQKLLQ 2838
>gi|239757430 PREDICTED: similar to lactation elevated 1 (predicted)
[Homo sapiens]
Length = 132
Score = 29.6 bits (65), Expect = 6.0
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 145 GLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRRILSLLMELKVAAQK 201
G W S LKE L +++K+ + +L NSL + ++ LMELK A++
Sbjct: 46 GFRRWVITNSSKLKEHVLTQCKEVKNLEKRLDKLLTGINSLEKNINDLMELKNTARE 102
>gi|113430845 PREDICTED: similar to protein kinase, DNA-activated,
catalytic polypeptide [Homo sapiens]
Length = 4096
Score = 29.6 bits (65), Expect = 6.0
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 141 EEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRRI----LSLLMELK 196
+EK L + R + +E ++SE K+K +Q+ + L I SL+ L+
Sbjct: 2735 QEKLSLMYARKGVAEQKREKEIKSELKMKQDAQVVLYRSYRHGDLPDIQIKHSSLITPLQ 2794
Query: 197 VAAQKN-FILKRLFWKTSDLFYFIVNKLHEYLPESRDKNALQNQSQ 241
AQ++ I K+LF S LF I+ ++ ++ S N Q Q
Sbjct: 2795 AVAQRDPIIAKQLF---SSLFSGILKEMDKFKTLSEKNNITQKLLQ 2837
>gi|239751946 PREDICTED: hypothetical protein XP_002348046 [Homo
sapiens]
Length = 132
Score = 29.6 bits (65), Expect = 6.0
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 145 GLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRRILSLLMELKVAAQK 201
G W S LKE L +++K+ + +L NSL + ++ LMELK A++
Sbjct: 46 GFRRWVITNSSKLKEHVLTQCKEVKNLEKRLDKLLTGINSLEKNINDLMELKNTARE 102
>gi|239746429 PREDICTED: hypothetical protein XP_002344210 [Homo
sapiens]
Length = 132
Score = 29.6 bits (65), Expect = 6.0
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 145 GLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRRILSLLMELKVAAQK 201
G W S LKE L +++K+ + +L NSL + ++ LMELK A++
Sbjct: 46 GFRRWVITNSSKLKEHVLTQCKEVKNLEKRLDKLLTGINSLEKNINDLMELKNTARE 102
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 29.6 bits (65), Expect = 6.0
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 93 SSPDREISQHIRIIYSSTV---------LKKECKKSNSVRKFLFPFHHTKAN-NKKVKEE 142
S P+ EI Q I + S + LK+ +KS V P +KK K+
Sbjct: 55 SLPNEEIVQKIEEVLSGVLDTELRYKPDLKEGSRKSRCVSVQTDPTDEIPTKKSKKHKKH 114
Query: 143 KNGLAFWRSKESRSLKESPLRSEEKIKHFS----QLKSELFLKDNS 184
KN + ++ + K P SE K K L+S+ FLK +S
Sbjct: 115 KNKKKKKKKEKEKKYKRQPEESESKTKSHDDGNIDLESDSFLKFDS 160
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 29.6 bits (65), Expect = 6.0
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 93 SSPDREISQHIRIIYSSTV---------LKKECKKSNSVRKFLFPFHHTKAN-NKKVKEE 142
S P+ EI Q I + S + LK+ +KS V P +KK K+
Sbjct: 55 SLPNEEIVQKIEEVLSGVLDTELRYKPDLKEGSRKSRCVSVQTDPTDEIPTKKSKKHKKH 114
Query: 143 KNGLAFWRSKESRSLKESPLRSEEKIKHFS----QLKSELFLKDNS 184
KN + ++ + K P SE K K L+S+ FLK +S
Sbjct: 115 KNKKKKKKKEKEKKYKRQPEESESKTKSHDDGNIDLESDSFLKFDS 160
>gi|148664197 coiled-coil domain containing 40 [Homo sapiens]
Length = 1142
Score = 29.6 bits (65), Expect = 6.0
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 165 EEKIKHFSQLKSELFLKDNSLRRILSLL-MELKVAAQKNFILKRLFWKTSDLFYFIVNKL 223
EE++ K EL + + R+ S + E K + +K L +DL KL
Sbjct: 792 EEQLASLDASKKELHIMEQKKLRVESKIEQEKKEQKEIEHHMKDL---DNDL-----KKL 843
Query: 224 HEYLPESRDKNALQNQSQRVDELVACIEIIQTLVLMFRETETESSRLNTLAAKKGALFNL 283
+ + ++R + Q+ RV E E +++L RET +LN L+ +K L N
Sbjct: 844 NMLMNKNRCSSEELEQNNRVTEN----EFVRSLKASERETIKMQDKLNQLSEEKATLLNQ 899
Query: 284 LV 285
LV
Sbjct: 900 LV 901
>gi|23503243 Ras association (RalGDS/AF-6) domain family
(N-terminal) member 8 [Homo sapiens]
Length = 392
Score = 29.6 bits (65), Expect = 6.0
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 116 CKKSNSVRKFLFPFHHTKANN--KKVKEEKNGLAFWRSKESRSLKESPLRSEEKIKHFS- 172
CK + K L K + K+++ + + FW K + +L+E +R E+KIK
Sbjct: 159 CKTTADELKKLIRLQTEKLQSIEKQLESNEIEIRFWEQKYNSNLEEEIVRLEQKIKRNDV 218
Query: 173 QLKSELFLKDNSLRRILSLLMELKVAAQKNFILKRLFWKTSDLFYFIVNKLHEYLPESR 231
+++ E F ++ EL++ + LK + NKL +YL + R
Sbjct: 219 EIEEEEFWEN-----------ELQIEQENEKQLKDQLQEIRQKITECENKLKDYLAQIR 266
>gi|203096856 kinesin family member 7 [Homo sapiens]
Length = 1343
Score = 29.3 bits (64), Expect = 7.9
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 134 ANNKKVKEEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSELFLKDNSLRR 187
A + + +EK GL R + S++L E +R +++H L+ EL K LR+
Sbjct: 944 AKKEALMQEKTGLESKRLRSSQALNEDIVRVSSRLEH---LEKELSEKSGQLRQ 994
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,746,139
Number of Sequences: 37866
Number of extensions: 629674
Number of successful extensions: 2498
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2484
Number of HSP's gapped (non-prelim): 29
length of query: 462
length of database: 18,247,518
effective HSP length: 106
effective length of query: 356
effective length of database: 14,233,722
effective search space: 5067205032
effective search space used: 5067205032
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.