PDGFA 5199

Name: PDGFA	Sequence: fasta or formatted (196aa)		NCBI GI: 15208656
Description: platelet-derived growth factor alpha isoform 2 preproprotein		Referenced in: Platelets and Megakaryocytes
Other entries for this name: alt prot [211aa] platelet-derived growth factor alpha isoform 1 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 13 1 C cysteine 5.1 10 2 D aspartate 4.1 8 1 E glutamate 9.7 19 2 F phenylalanine 0.5 1 1 G glycine 2.6 5 1 H histidine 4.1 8 2 I isoleucine 5.1 10 1 K lysine 6.1 12 2 L leucine 9.7 19 4 M methionine 0.5 1 1 N asparagine 1.5 3 1 P proline 6.1 12 2 Q glutamine 2.6 5 1 R arginine 10.2 20 2 S serine 7.1 14 2 T threonine 5.6 11 2 V valine 10.2 20 1 W tryptophan 0.5 1 1 Y tyrosine 2.0 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 platelet-derived growth factor alpha isoform 2 prepr... PDGFA 0.984 platelet-derived growth factor alpha isoform 1 prepr... PDGFB 0.327 platelet-derived growth factor beta isoform 1 preprop... PDGFB 0.306 platelet-derived growth factor beta isoform 2 prepro... VEGFB 0.067 vascular endothelial growth factor B FIGF 0.056 vascular endothelial growth factor D preproprotein [H... PGF 0.054 placental growth factor, vascular endothelial growth... VEGFC 0.048 vascular endothelial growth factor C preproprotein [H... PDGFC 0.040 platelet-derived growth factor C precursor VEGFA 0.038 vascular endothelial growth factor A isoform f precu... VEGFA 0.038 vascular endothelial growth factor A isoform e precu... VEGFA 0.038 vascular endothelial growth factor A isoform d precu... VEGFA 0.038 vascular endothelial growth factor A isoform c precu... VEGFA 0.038 vascular endothelial growth factor A isoform b precu... VEGFA 0.038 vascular endothelial growth factor A isoform a precu... VEGFA 0.038 vascular endothelial growth factor A isoform g precu... PDGFD 0.029 platelet derived growth factor D isoform 1 precursor... PDGFD 0.029 platelet derived growth factor D isoform 2 precursor... APC2 0.016 adenomatosis polyposis coli 2 C1orf68 0.013 skin-specific protein 32 TBCKL 0.011 TBC domain-containing protein kinase-like NF2 0.008 neurofibromin 2 isoform 7 NF2 0.008 neurofibromin 2 isoform 2 NF2 0.008 neurofibromin 2 isoform 2 NF2 0.008 neurofibromin 2 isoform 7 NF2 0.008 neurofibromin 2 isoform 6 NF2 0.008 neurofibromin 2 isoform 5 NF2 0.008 neurofibromin 2 isoform 2 NF2 0.008 neurofibromin 2 isoform 1 SLIT3 0.008 slit homolog 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.