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Search of human proteins with 150378541
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|150378541 enoyl Coenzyme A hydratase domain containing 2
[Homo sapiens]
(261 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Hom... 507 e-144
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 242 3e-64
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 100 1e-21
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 75 4e-14
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 69 5e-12
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 66 3e-11
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 61 1e-09
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof... 52 4e-07
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof... 52 4e-07
gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... 47 1e-05
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [... 47 1e-05
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 47 2e-05
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 46 4e-05
gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 43 3e-04
gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 43 3e-04
gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 43 3e-04
gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Hom... 42 4e-04
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 42 5e-04
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 42 5e-04
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 42 5e-04
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 42 5e-04
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 41 0.001
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 41 0.001
gi|50593027 enoyl Coenzyme A hydratase domain containing 1 isofo... 39 0.005
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof... 36 0.030
gi|8922873 GTPase, IMAP family member 4 [Homo sapiens] 31 1.2
gi|153792298 piwi-like 3 [Homo sapiens] 29 3.6
>gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Homo
sapiens]
Length = 261
Score = 507 bits (1306), Expect = e-144
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MLRVLCLLRPWRPLRARGCASDGAAGGSEIQVRALAGPDQGITEILMNRPSARNALGNVF 60
MLRVLCLLRPWRPLRARGCASDGAAGGSEIQVRALAGPDQGITEILMNRPSARNALGNVF
Sbjct: 1 MLRVLCLLRPWRPLRARGCASDGAAGGSEIQVRALAGPDQGITEILMNRPSARNALGNVF 60
Query: 61 VSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFVQRLRGLMND 120
VSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFVQRLRGLMND
Sbjct: 61 VSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFVQRLRGLMND 120
Query: 121 IASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAV 180
IASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAV
Sbjct: 121 IASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAV 180
Query: 181 AQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGTEVDIASGMAIEGMCYAQNIPT 240
AQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGTEVDIASGMAIEGMCYAQNIPT
Sbjct: 181 AQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGTEVDIASGMAIEGMCYAQNIPT 240
Query: 241 RDRLEGMAAFREKRTPKFVGK 261
RDRLEGMAAFREKRTPKFVGK
Sbjct: 241 RDRLEGMAAFREKRTPKFVGK 261
>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
Length = 339
Score = 242 bits (617), Expect = 3e-64
Identities = 127/280 (45%), Positives = 182/280 (65%), Gaps = 32/280 (11%)
Query: 13 PLRARGCASDGAAGGSEIQVRALAGPDQGITEILMNRPSARNALGNVFVSELLETLAQLR 72
P RG +S+ E++VR L ++GI + +NR +N+L + L + + L+
Sbjct: 61 PAPKRGYSSEMKTE-DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALK 119
Query: 73 EDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFVQRLRGLMNDIA---------- 122
D++VR ++ RS V G+FCAGADLKER +MS +EVG FV ++R ++NDIA
Sbjct: 120 SDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAI 179
Query: 123 ---------------------SSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFT 161
SSA MGL+ET ++PG GGTQRLPR +G++LAKELIF+
Sbjct: 180 DGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFS 239
Query: 162 GRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGTEV 221
R L G EA +GL++H + QN+EGDAAY++A LA+E LPQ P+A+R+ K+AI++G EV
Sbjct: 240 ARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEV 299
Query: 222 DIASGMAIEGMCYAQNIPTRDRLEGMAAFREKRTPKFVGK 261
D+ +G+AIE CYAQ IPT+DRLEG+ AF+EKR P++ G+
Sbjct: 300 DLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE 339
>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
precursor [Homo sapiens]
Length = 290
Score = 100 bits (249), Expect = 1e-21
Identities = 85/289 (29%), Positives = 125/289 (43%), Gaps = 37/289 (12%)
Query: 2 LRVL--CLLRPWRP-LRARGCASDGAAGGSEIQVRALAGPDQGITEILMNRPSARNALGN 58
LRVL C+ P RP +R + E + G + + I +NRP A NAL +
Sbjct: 4 LRVLLSCVRGPLRPPVRCPAWRPFASGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCD 63
Query: 59 VFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEV----------- 107
+ EL + L ED V ++ G K F AGAD+KE + +S +
Sbjct: 64 GLIDELNQALKTFEEDPAVGAIVLTGGDKA-FAAGADIKEMQNLSFQDCYSSKFLKHWDH 122
Query: 108 -----GVFVQRLRG----------LMNDI---ASSAVMGLIETTRGLLPGAGGTQRLPRC 149
+ + G +M DI A E G +PGAGGTQRL R
Sbjct: 123 LTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRA 182
Query: 150 LGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEILPQAPIAVR 209
+G +LA E++ TG R+S +A GLV+ + + A A++I + I V
Sbjct: 183 VGKSLAMEMVLTGDRISAQDAKQAGLVSKICPV----ETLVEEAIQCAEKIASNSKIVVA 238
Query: 210 LGKVAIDRGTEVDIASGMAIEGMCYAQNIPTRDRLEGMAAFREKRTPKF 258
+ K +++ E+ + G +E + T DR EGM AF EKR F
Sbjct: 239 MAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANF 287
>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
sapiens]
Length = 303
Score = 75.5 bits (184), Expect = 4e-14
Identities = 78/290 (26%), Positives = 124/290 (42%), Gaps = 47/290 (16%)
Query: 5 LCLLR-PWRPLRARGCASDGA-AGGSEIQVRALAGPD-QGITEILMNRPSARNALGNVFV 61
+CL R PW L AR C+ D A AG E + R + GI I+++ P RN L +
Sbjct: 16 MCLRRGPWAQLPARFCSRDPAGAGRRESEPRPTSARQLDGIRNIVLSNPKKRNTLSLAML 75
Query: 62 SELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKE--REQMSEAEVGVF------VQR 113
L + + ++V++ S VF +G DLKE EQ + VF +
Sbjct: 76 KSLQSDILHDADSNDLKVIII-SAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMH 134
Query: 114 LRG-------LMNDIASSAVMGLIET-------------TRGL-------LPGAGGTQRL 146
+R ++N +A++A L+ + T G+ PG + +
Sbjct: 135 IRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVALARAV 194
Query: 147 PRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEILPQAPI 206
PR +A E++FTG +S EA + GL++ V + E + + AR +A P
Sbjct: 195 PR----KVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRP---- 246
Query: 207 AVRLGKVAIDRGTEVDIASGMAIEGMCYAQNIPTRDRLEGMAAFREKRTP 256
V LGK + D+ + + N+ RD EG+ AF +KR P
Sbjct: 247 VVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKP 296
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 68.6 bits (166), Expect = 5e-12
Identities = 71/275 (25%), Positives = 109/275 (39%), Gaps = 46/275 (16%)
Query: 4 VLCLLRPWRPLRARGCASDGAAGGSEIQVRALA--GPDQGITEILMNRPSAR-NALGNVF 60
+L +R LR+RG G S + R G + + +N P+++ N L
Sbjct: 9 ILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSKVNTLSKEL 68
Query: 61 VSELLETLAQLREDRQVRVLLFRSGVKGVFCAGAD---------LKEREQMSEAEVGVFV 111
SE E + ++ Q+R + S G F AGAD L+E Q+S+ E V
Sbjct: 69 HSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTLQEVTQLSQ-EAQRIV 127
Query: 112 QRLRGLMNDIASS--------------------------AVMGLIETTRGLLPGAGGTQR 145
++L I ++ V+G E G LPGAGGTQR
Sbjct: 128 EKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQR 187
Query: 146 LPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEG-DAAYQRARALAQEILPQA 204
LP+ +GV A +++ TGR + A +GLV+ V G +R +E
Sbjct: 188 LPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPGLKPPEERTIEYLEE----- 242
Query: 205 PIAVRLGKVAIDRGTEVDIASGMAIEGMCYAQNIP 239
+A+ K D+ G+ + YA IP
Sbjct: 243 -VAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
Length = 328
Score = 66.2 bits (160), Expect = 3e-11
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 47/261 (18%)
Query: 42 ITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQ 101
+ + +NRP+ RNA+ VF E++E ++ D R ++ SG +F AG DL +
Sbjct: 67 VLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVI-SGAGKMFTAGIDLMDMAS 125
Query: 102 MSEAEVGVFVQRLRGLMNDI---------------------------------------- 121
G V R+ + DI
Sbjct: 126 DILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIR 185
Query: 122 --ASSAVMGLIETTRGLLPGAGGTQRLPRCLG-VALAKELIFTGRRLSGTEAHVLGLVNH 178
A A + E GL G QRLP+ +G +L EL FT R++ EA GLV+
Sbjct: 186 YCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSR 245
Query: 179 AVAQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGTEVDIASGMAIEGMCYAQNI 238
E A ALA EI ++P+AV+ KV + + +A + +
Sbjct: 246 VFPDKE---VMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSML 302
Query: 239 PTRDRLEGMAAFREKRTPKFV 259
T+D ++ + A E + K V
Sbjct: 303 QTQDLVKSVQATTENKELKTV 323
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 60.8 bits (146), Expect = 1e-09
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 27/153 (17%)
Query: 54 NALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLK---------------- 97
NA+ + ++ E L + D ++ ++ G +G F AGAD++
Sbjct: 22 NAISTTLLRDIKEGLQKAVIDHTIKAIVI-CGAEGKFSAGADIRGFSAPRTFGLTLGHVV 80
Query: 98 EREQMSEAEVGVFVQRLR---------GLMNDIA-SSAVMGLIETTRGLLPGAGGTQRLP 147
+ Q +E V +Q + G IA + A +GL E T GLLPGA GTQ LP
Sbjct: 81 DEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLP 140
Query: 148 RCLGVALAKELIFTGRRLSGTEAHVLGLVNHAV 180
R GV A +LI +GRR+ EA LG+++ V
Sbjct: 141 RLTGVPAALDLITSGRRILADEALKLGILDKVV 173
>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
1 [Homo sapiens]
Length = 301
Score = 52.4 bits (124), Expect = 4e-07
Identities = 49/224 (21%), Positives = 90/224 (40%), Gaps = 34/224 (15%)
Query: 39 DQGITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKE 98
D GI + +N PS NA V + +LLE + +L + + L+ R G K F +G+DL
Sbjct: 55 DNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVR-GAKNTFSSGSDLNA 113
Query: 99 REQMSEAEVGVFV-----------QRLRGLMNDIASSAVMG------------------- 128
+ + E G+ V RL + + +G
Sbjct: 114 VKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESK 173
Query: 129 --LIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEG 186
+ G++P GGT RL +G A +++ +L A +G+V V Q+ +
Sbjct: 174 IRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEE-VLQSSDE 232
Query: 187 DAAYQRARALAQEILPQAPIAVRLGKVAIDRGTEVDIASGMAIE 230
+ + A+ ++ + P +R K ++ G E+ + + E
Sbjct: 233 TKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNE 276
>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
5 [Homo sapiens]
Length = 307
Score = 52.4 bits (124), Expect = 4e-07
Identities = 49/224 (21%), Positives = 90/224 (40%), Gaps = 34/224 (15%)
Query: 39 DQGITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKE 98
D GI + +N PS NA V + +LLE + +L + + L+ R G K F +G+DL
Sbjct: 61 DNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVR-GAKNTFSSGSDLNA 119
Query: 99 REQMSEAEVGVFV-----------QRLRGLMNDIASSAVMG------------------- 128
+ + E G+ V RL + + +G
Sbjct: 120 VKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESK 179
Query: 129 --LIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEG 186
+ G++P GGT RL +G A +++ +L A +G+V V Q+ +
Sbjct: 180 IRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEE-VLQSSDE 238
Query: 187 DAAYQRARALAQEILPQAPIAVRLGKVAIDRGTEVDIASGMAIE 230
+ + A+ ++ + P +R K ++ G E+ + + E
Sbjct: 239 TKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNE 282
>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
Length = 338
Score = 47.4 bits (111), Expect = 1e-05
Identities = 42/170 (24%), Positives = 64/170 (37%), Gaps = 35/170 (20%)
Query: 45 ILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLK---EREQ 101
I +NRP NAL + ++ L + +D + +++ + FCAG D++ E E+
Sbjct: 49 ITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEK 108
Query: 102 MSEAEVGVFVQRLRGLMNDIAS-------------------------------SAVMGLI 130
+ VF + L N + S + +
Sbjct: 109 AKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMP 168
Query: 131 ETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAV 180
ET GL P GG LPR G L L TG RL G + + G+ H V
Sbjct: 169 ETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFV 217
>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
[Homo sapiens]
Length = 386
Score = 47.4 bits (111), Expect = 1e-05
Identities = 42/170 (24%), Positives = 64/170 (37%), Gaps = 35/170 (20%)
Query: 45 ILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLK---EREQ 101
I +NRP NAL + ++ L + +D + +++ + FCAG D++ E E+
Sbjct: 49 ITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEK 108
Query: 102 MSEAEVGVFVQRLRGLMNDIAS-------------------------------SAVMGLI 130
+ VF + L N + S + +
Sbjct: 109 AKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMP 168
Query: 131 ETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAV 180
ET GL P GG LPR G L L TG RL G + + G+ H V
Sbjct: 169 ETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFV 217
>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
Length = 506
Score = 47.0 bits (110), Expect = 2e-05
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 38/175 (21%)
Query: 39 DQGITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADL- 96
++G T IL++ + S NAL + E+ L D +LL S V VFC+G D
Sbjct: 257 EEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLL--SAVGSVFCSGLDYS 314
Query: 97 -----------KEREQMSEAE---VGVFVQRLRGL-----------------MNDIASSA 125
KE +++EA V F+Q + + + DI ++
Sbjct: 315 YLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWAS 374
Query: 126 VMGLIET---TRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
+T T L P + P+ LGVALA E++F GR+L+ EA GLV+
Sbjct: 375 EKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLVS 429
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 45.8 bits (107), Expect = 4e-05
Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 43/213 (20%)
Query: 39 DQGITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADL-- 96
+ GIT+I+ NRP +NA+ E++ L +D + +L +G + +G DL
Sbjct: 117 EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNG--DYYSSGNDLTN 174
Query: 97 -------------KEREQMSEAEVGVFVQRLRGLMNDIASSAVMGLIETTRGLLPGAGGT 143
K + VG F+ + L+ + AV G+ T GL +
Sbjct: 175 FTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAV-GISVTLLGLFDAVYAS 233
Query: 144 QR---------------------LPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQ 182
R P+ + A A E++ G++L+ EA GLV
Sbjct: 234 DRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPD 293
Query: 183 NEEGDAAYQRARALAQEILPQAPIAVRLGKVAI 215
+ + R +A A+ LP P A+R+ K I
Sbjct: 294 STFQKEVWTRLKAFAK--LP--PNALRISKEVI 322
>gi|221307494 chromodomain protein, Y chromosome-like isoform a
[Homo sapiens]
Length = 544
Score = 42.7 bits (99), Expect = 3e-04
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 38/173 (21%)
Query: 41 GITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADL--- 96
G T IL++ + S N+L + E+ L+ D VLL S V VFC G D
Sbjct: 297 GFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLL--SAVGSVFCCGLDFIYF 354
Query: 97 -------KEREQMSEAE-----VGVFVQRLRGLMNDIASSAV------MGLIE------- 131
++RE AE V F+Q + ++ + A+ + L +
Sbjct: 355 IRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEK 414
Query: 132 -------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
TT G P T P+ +G A A E++ +GR+L+ EA GLV+
Sbjct: 415 AWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVS 467
>gi|221136756 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 42.7 bits (99), Expect = 3e-04
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 38/173 (21%)
Query: 41 GITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADL--- 96
G T IL++ + S N+L + E+ L+ D VLL S V VFC G D
Sbjct: 165 GFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLL--SAVGSVFCCGLDFIYF 222
Query: 97 -------KEREQMSEAE-----VGVFVQRLRGLMNDIASSAV------MGLIE------- 131
++RE AE V F+Q + ++ + A+ + L +
Sbjct: 223 IRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEK 282
Query: 132 -------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
TT G P T P+ +G A A E++ +GR+L+ EA GLV+
Sbjct: 283 AWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVS 335
>gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 42.7 bits (99), Expect = 3e-04
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 38/173 (21%)
Query: 41 GITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADL--- 96
G T IL++ + S N+L + E+ L+ D VLL S V VFC G D
Sbjct: 165 GFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLL--SAVGSVFCCGLDFIYF 222
Query: 97 -------KEREQMSEAE-----VGVFVQRLRGLMNDIASSAV------MGLIE------- 131
++RE AE V F+Q + ++ + A+ + L +
Sbjct: 223 IRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEK 282
Query: 132 -------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
TT G P T P+ +G A A E++ +GR+L+ EA GLV+
Sbjct: 283 AWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVS 335
>gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Homo
sapiens]
Length = 302
Score = 42.4 bits (98), Expect = 4e-04
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 12 RPLRARGCASDGAAGGSEIQVRALAGPDQGITEILMN-RPSARNALGNVFVSELLETLAQ 70
R RA G GS+ R L PD G +M + N+L F++EL+ +L +
Sbjct: 28 RTERAAGGGDGARRFGSQ---RVLVEPDAGAGVAVMKFKNPPVNSLSLEFLTELVISLEK 84
Query: 71 LREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFVQRLRGLMNDIASSAVMGLI 130
L D+ R ++ S GVF AG DL E S A + + ++ L + S ++ L+
Sbjct: 85 LENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLV-LV 143
Query: 131 ETTRGLLPGAG 141
G P G
Sbjct: 144 SAINGACPAGG 154
>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
[Homo sapiens]
Length = 554
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 38/175 (21%)
Query: 39 DQGITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGAD-- 95
+ G T+I+++ R + +NAL + E++ L D VL +G VFC G D
Sbjct: 291 EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAG--SVFCCGLDFG 348
Query: 96 -----LKEREQMSEAE--------VGVFVQRLRGLMNDIASSAV------MGLIE----- 131
L+ + E V F+Q + ++ + A+ + L +
Sbjct: 349 YFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWAN 408
Query: 132 ---------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
TT G P + P+ +G A A E++ GR+L+ EA GLV+
Sbjct: 409 EKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVS 463
>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
a [Homo sapiens]
Length = 540
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 38/175 (21%)
Query: 39 DQGITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGAD-- 95
+ G T+I+++ R + +NAL + E++ L D VL +G VFC G D
Sbjct: 291 EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAG--SVFCCGLDFG 348
Query: 96 -----LKEREQMSEAE--------VGVFVQRLRGLMNDIASSAV------MGLIE----- 131
L+ + E V F+Q + ++ + A+ + L +
Sbjct: 349 YFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWAN 408
Query: 132 ---------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
TT G P + P+ +G A A E++ GR+L+ EA GLV+
Sbjct: 409 EKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVS 463
>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
sapiens]
Length = 554
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 38/175 (21%)
Query: 39 DQGITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGAD-- 95
+ G T+I+++ R + +NAL + E++ L D VL +G VFC G D
Sbjct: 291 EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAG--SVFCCGLDFG 348
Query: 96 -----LKEREQMSEAE--------VGVFVQRLRGLMNDIASSAV------MGLIE----- 131
L+ + E V F+Q + ++ + A+ + L +
Sbjct: 349 YFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWAN 408
Query: 132 ---------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
TT G P + P+ +G A A E++ GR+L+ EA GLV+
Sbjct: 409 EKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVS 463
>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
sapiens]
Length = 540
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 38/175 (21%)
Query: 39 DQGITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGAD-- 95
+ G T+I+++ R + +NAL + E++ L D VL +G VFC G D
Sbjct: 291 EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAG--SVFCCGLDFG 348
Query: 96 -----LKEREQMSEAE--------VGVFVQRLRGLMNDIASSAV------MGLIE----- 131
L+ + E V F+Q + ++ + A+ + L +
Sbjct: 349 YFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWAN 408
Query: 132 ---------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
TT G P + P+ +G A A E++ GR+L+ EA GLV+
Sbjct: 409 EKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVS 463
>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
Length = 541
Score = 41.2 bits (95), Expect = 0.001
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 38/175 (21%)
Query: 39 DQGITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGAD-- 95
+ G T+I+++ R + +NAL + E++ L D VL +G VFC G D
Sbjct: 292 EDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAG--SVFCCGLDFG 349
Query: 96 -----LKEREQMSEAE--------VGVFVQRLRGLMNDIASSAV------MGLIE----- 131
L+ + E V F+Q + ++ + A+ + L +
Sbjct: 350 YFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWAN 409
Query: 132 ---------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
TT G P + P+ +G A A E++ GR+L+ EA GLV+
Sbjct: 410 EKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVS 464
>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
Length = 541
Score = 41.2 bits (95), Expect = 0.001
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 38/175 (21%)
Query: 39 DQGITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGAD-- 95
+ G T+I+++ R + +NAL + E++ L D VL +G VFC G D
Sbjct: 292 EDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAG--SVFCCGLDFG 349
Query: 96 -----LKEREQMSEAE--------VGVFVQRLRGLMNDIASSAV------MGLIE----- 131
L+ + E V F+Q + ++ + A+ + L +
Sbjct: 350 YFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWAN 409
Query: 132 ---------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
TT G P + P+ +G A A E++ GR+L+ EA GLV+
Sbjct: 410 EKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVS 464
>gi|50593027 enoyl Coenzyme A hydratase domain containing 1 isoform
2 [Homo sapiens]
Length = 145
Score = 38.9 bits (89), Expect = 0.005
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 39 DQGITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKE 98
D GI + +N PS NA V + +LLE + +L + + L+ R G K F +G+DL
Sbjct: 55 DNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVR-GAKNTFSSGSDLNA 113
Query: 99 REQMSEAE 106
+ + E
Sbjct: 114 VKSLGTPE 121
>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
3 [Homo sapiens]
Length = 226
Score = 36.2 bits (82), Expect = 0.030
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 34/200 (17%)
Query: 63 ELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFV----------- 111
+LLE + +L + + L+ R G K F +G+DL + + E G+ V
Sbjct: 4 QLLEKVIELENWTEGKGLIVR-GAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLTRF 62
Query: 112 QRLRGLMNDIASSAVMG---------------------LIETTRGLLPGAGGTQRLPRCL 150
RL + + +G + G++P GGT RL +
Sbjct: 63 MRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEII 122
Query: 151 GVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEILPQAPIAVRL 210
G A +++ +L A +G+V V Q+ + + + A+ ++ + P +R
Sbjct: 123 GSRQALKVLSGALKLDSKNALNIGMVEE-VLQSSDETKSLEEAQEWLKQFIQGPPEVIRA 181
Query: 211 GKVAIDRGTEVDIASGMAIE 230
K ++ G E+ + + E
Sbjct: 182 LKKSVCSGRELYLEEALQNE 201
>gi|8922873 GTPase, IMAP family member 4 [Homo sapiens]
Length = 329
Score = 30.8 bits (68), Expect = 1.2
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 161 TGRRLSGTEAHVLGLVNHAVAQNEEG---DAAYQRARALAQEILPQAPIAVRLGKVAIDR 217
TG A +LGL+ V +N+EG + YQRA +EI Q L +V ++R
Sbjct: 194 TGAEQEAQRAQLLGLIQRVVRENKEGCYTNRMYQRAE---EEIQKQTQAMQELHRVELER 250
>gi|153792298 piwi-like 3 [Homo sapiens]
Length = 882
Score = 29.3 bits (64), Expect = 3.6
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 7 LLRPWRPLRARGCASDGAAGGSEIQVRALAGPDQGITEILMNRPSARNALGNVFVSELLE 66
++RP +P ARG GA GG++ Q GP+ G L P +G VF ++
Sbjct: 54 VVRPLQPRAARG----GAGGGAQSQGVKEPGPEAG----LHTAPLQERRIGGVFQDLVVN 105
Query: 67 TLAQLR 72
T ++
Sbjct: 106 TRQDMK 111
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,626,394
Number of Sequences: 37866
Number of extensions: 331378
Number of successful extensions: 832
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 788
Number of HSP's gapped (non-prelim): 36
length of query: 261
length of database: 18,247,518
effective HSP length: 100
effective length of query: 161
effective length of database: 14,460,918
effective search space: 2328207798
effective search space used: 2328207798
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.