UBB 572

Name: UBB	Sequence: fasta or formatted (229aa)		NCBI GI: 11024714
Description: ubiquitin B precursor		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.6 6 1 C cysteine 0.4 1 1 D aspartate 6.6 15 1 E glutamate 7.9 18 1 F phenylalanine 2.6 6 1 G glycine 7.9 18 2 H histidine 1.3 3 1 I isoleucine 9.2 21 1 K lysine 9.2 21 1 L leucine 11.8 27 1 M methionine 1.3 3 1 N asparagine 2.6 6 1 P proline 3.9 9 2 Q glutamine 7.9 18 2 R arginine 5.2 12 1 S serine 3.9 9 1 T threonine 9.2 21 1 V valine 5.2 12 1 W tryptophan 0.0 0 0 Y tyrosine 1.3 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin B precursor UBC 0.991 ubiquitin C UBA52 0.298 ubiquitin and ribosomal protein L40 precursor UBA52 0.298 ubiquitin and ribosomal protein L40 precursor RPS27A 0.298 ubiquitin and ribosomal protein S27a precursor [Hom... RPS27A 0.298 ubiquitin and ribosomal protein S27a precursor LOC100128355 0.258 PREDICTED: similar to hCG1790904 LOC100128355 0.258 PREDICTED: similar to hCG1790904 LOC100128355 0.258 PREDICTED: similar to hCG1790904 NEDD8 0.168 neural precursor cell expressed, developmentally down... UBD 0.139 ubiquitin D ISG15 0.123 ISG15 ubiquitin-like modifier ANUBL1 0.111 AN1, ubiquitin-like, homolog ANUBL1 0.111 AN1, ubiquitin-like, homolog OASL 0.109 2'-5'-oligoadenylate synthetase-like isoform a [Homo... UBL4A 0.090 ubiquitin-like 4 RAD23B 0.064 UV excision repair protein RAD23 homolog B UHRF1 0.061 ubiquitin-like with PHD and ring finger domains 1 i... UHRF1 0.061 ubiquitin-like with PHD and ring finger domains 1 i... PARK2 0.059 parkin isoform 2 PARK2 0.059 parkin isoform 1 FAU 0.059 ubiquitin-like protein fubi and ribosomal protein S30... UHRF2 0.057 ubiquitin-like with PHD and ring finger domains 2 [H... UBL4B 0.057 ubiquitin-like 4B SF3A1 0.054 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... SF3A1 0.054 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... UBTD1 0.054 ubiquitin domain containing 1 BAT3 0.052 HLA-B associated transcript-3 isoform b BAT3 0.052 HLA-B associated transcript-3 isoform b BAT3 0.052 HLA-B associated transcript-3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.