| Name: UBD | Sequence: fasta or formatted (165aa) | NCBI GI: 222352096 | |
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Description: ubiquitin D
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Referenced in: Ubiquitin and Related Protein Modifications
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.8 8 1 C cysteine 3.0 5 1 D aspartate 5.5 9 1 E glutamate 6.7 11 2 F phenylalanine 1.8 3 1 G glycine 6.1 10 2 H histidine 2.4 4 1 I isoleucine 6.1 10 2 K lysine 10.3 17 2 L leucine 10.9 18 3 M methionine 3.0 5 2 N asparagine 2.4 4 1 P proline 4.2 7 1 Q glutamine 3.0 5 1 R arginine 5.5 9 2 S serine 7.9 13 3 T threonine 4.8 8 1 V valine 8.5 14 2 W tryptophan 0.6 1 1 Y tyrosine 2.4 4 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 ubiquitin D UBB 0.193 ubiquitin B precursor UBC 0.193 ubiquitin C UBA52 0.088 ubiquitin and ribosomal protein L40 precursor UBA52 0.088 ubiquitin and ribosomal protein L40 precursor RPS27A 0.082 ubiquitin and ribosomal protein S27a precursor [Hom... RPS27A 0.082 ubiquitin and ribosomal protein S27a precursor ISG15 0.065 ISG15 ubiquitin-like modifier LOC100128355 0.062 PREDICTED: similar to hCG1790904 LOC100128355 0.062 PREDICTED: similar to hCG1790904 LOC100128355 0.062 PREDICTED: similar to hCG1790904 OASL 0.059 2'-5'-oligoadenylate synthetase-like isoform a [Homo... NEDD8 0.056 neural precursor cell expressed, developmentally down... FAU 0.049 ubiquitin-like protein fubi and ribosomal protein S30... UBQLN1 0.046 ubiquilin 1 isoform 2 UBQLN1 0.046 ubiquilin 1 isoform 1 UBQLN4 0.046 ataxin-1 ubiquitin-like interacting protein RAD23B 0.039 UV excision repair protein RAD23 homolog B UBQLN2 0.036 ubiquilin 2 UBQLN3 0.033 ubiquilin 3 UBL4A 0.033 ubiquitin-like 4 LOC100291851 0.029 PREDICTED: similar to Putative ubiquitin-like prote... LOC100290696 0.029 PREDICTED: hypothetical protein XP_002347291 SHARPIN 0.020 shank-interacting protein-like 1 UBL4B 0.020 ubiquitin-like 4B ATRX 0.016 transcriptional regulator ATRX isoform 2 ATRX 0.016 transcriptional regulator ATRX isoform 1 UHRF1 0.013 ubiquitin-like with PHD and ring finger domains 1 i... DDI2 0.013 DNA-damage inducible protein 2 UHRF1 0.010 ubiquitin-like with PHD and ring finger domains 1 i...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
