Search of human proteins with 150010673

Search of human proteins with 150010673

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|150010673 hypothetical protein LOC414318 [Homo sapiens]
         (232 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|150010673 hypothetical protein LOC414318 [Homo sapiens]            520   e-148
gi|42821110 hypothetical protein LOC340602 [Homo sapiens]              39   0.005
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi...    34   0.093
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo...    34   0.093
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo...    34   0.093
gi|9945318 MAX binding protein [Homo sapiens]                          34   0.093
gi|239755724 PREDICTED: hypothetical protein [Homo sapiens]            33   0.27 
gi|89363020 nuclear transcription factor, X-box binding-like 1 [...    32   0.35 
gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo sapi...    32   0.46 
gi|32699048 family with sequence similarity 70, member B [Homo s...    32   0.46 
gi|67089160 promyelocytic leukemia protein isoform 11 [Homo sapi...    32   0.60 
gi|27886561 nuclear factor of activated T-cells, cytoplasmic, ca...    32   0.60 
gi|27886559 nuclear factor of activated T-cells, cytoplasmic, ca...    32   0.60 
gi|27886555 nuclear factor of activated T-cells, cytoplasmic, ca...    32   0.60 
gi|4758804 nuclear factor of activated T-cells, cytoplasmic, cal...    32   0.60 
gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens]    32   0.60 
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]            31   0.79 
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ...    31   0.79 
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...    31   0.79 
gi|116063534 ankyrin repeat domain 27 (VPS9 domain) [Homo sapiens]     31   1.0  
gi|148727264 transcription elongation regulator 1-like [Homo sap...    31   1.0  
gi|110431348 deleted in colorectal carcinoma [Homo sapiens]            30   1.3  
gi|11415052 retinoid X receptor, beta [Homo sapiens]                   30   1.3  
gi|148612857 sickle tail isoform 3 [Homo sapiens]                      30   1.3  
gi|148612813 sickle tail isoform 2 [Homo sapiens]                      30   1.3  
gi|50843820 sickle tail isoform 1 [Homo sapiens]                       30   1.3  
gi|95147555 microtubule-associated protein 1A [Homo sapiens]           30   1.3  
gi|188219571 putative homeodomain transcription factor 2 isoform...    30   1.3  
gi|188219569 putative homeodomain transcription factor 2 isoform...    30   1.3  
gi|188219565 putative homeodomain transcription factor 2 isoform...    30   1.3  

>gi|150010673 hypothetical protein LOC414318 [Homo sapiens]
          Length = 232

 Score =  520 bits (1339), Expect = e-148
 Identities = 232/232 (100%), Positives = 232/232 (100%)

Query: 1   MAYVALSDKPHLSGEVGEEACSSWNPPLFSPRPLPRLWPLPGTPFLPIRALPFSASSSGK 60
           MAYVALSDKPHLSGEVGEEACSSWNPPLFSPRPLPRLWPLPGTPFLPIRALPFSASSSGK
Sbjct: 1   MAYVALSDKPHLSGEVGEEACSSWNPPLFSPRPLPRLWPLPGTPFLPIRALPFSASSSGK 60

Query: 61  SSLVPSPSSSAHSGFRTPCLGPDCLLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHL 120
           SSLVPSPSSSAHSGFRTPCLGPDCLLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHL
Sbjct: 61  SSLVPSPSSSAHSGFRTPCLGPDCLLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHL 120

Query: 121 NPLLCDPGSQVEPSWPWHPGLEQAAASWVGNHVSPAHRQALRGHSLGSALRALMPGGHCP 180
           NPLLCDPGSQVEPSWPWHPGLEQAAASWVGNHVSPAHRQALRGHSLGSALRALMPGGHCP
Sbjct: 121 NPLLCDPGSQVEPSWPWHPGLEQAAASWVGNHVSPAHRQALRGHSLGSALRALMPGGHCP 180

Query: 181 LCVPCKRGCNLRGGRGKHGPRPCCPLLRKFPVLPVHPWPFPCAVWDSGWSCR 232
           LCVPCKRGCNLRGGRGKHGPRPCCPLLRKFPVLPVHPWPFPCAVWDSGWSCR
Sbjct: 181 LCVPCKRGCNLRGGRGKHGPRPCCPLLRKFPVLPVHPWPFPCAVWDSGWSCR 232


>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
          Length = 503

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 9/119 (7%)

Query: 19  EACSSWNPP---LFSPRPLPRLWPLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSGF 75
           +A  +  PP   LF P PLP     P +P     + P S +S+   +  P P+  +H+  
Sbjct: 155 QAAPAQKPPGRRLF-PEPLP-----PSSPGFRPSSYPCSGASTSSQATQPGPALLSHASE 208

Query: 76  RTPCLGPDCLLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHLNPLLCDPGSQVEPS 134
             P       L               +  C A+  P  P    HL+P    P S   P+
Sbjct: 209 ARPATRSRITLVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPA 267


>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
           sapiens]
          Length = 422

 Score = 34.3 bits (77), Expect = 0.093
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 111 PGDPQEVRHLNPLLCDPGSQVEPSWPWHPGLEQAAASW 148
           PG  Q V H   +L  P SQ  P W W  G + A  +W
Sbjct: 286 PGPAQAVPHGQGVLAPPASQWSPCWGWGRGPQVAGVAW 323


>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 34.3 bits (77), Expect = 0.093
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 21  CSSWNPPLFSPRPLPRLWPLPG-TPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTPC 79
           C+   PP   P+P P  +  P  + F P   +P S+SSS  SS   S SSS+ S   +  
Sbjct: 60  CAPGPPPQPPPQPPPPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQA 119

Query: 80  LGPD 83
             PD
Sbjct: 120 KKPD 123


>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 34.3 bits (77), Expect = 0.093
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 21  CSSWNPPLFSPRPLPRLWPLPG-TPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTPC 79
           C+   PP   P+P P  +  P  + F P   +P S+SSS  SS   S SSS+ S   +  
Sbjct: 60  CAPGPPPQPPPQPPPPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQA 119

Query: 80  LGPD 83
             PD
Sbjct: 120 KKPD 123


>gi|9945318 MAX binding protein [Homo sapiens]
          Length = 582

 Score = 34.3 bits (77), Expect = 0.093
 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 22  SSWNPPLFSPRPLP-RLWPLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTPCL 80
           S+  PP  +P PLP    P P +  LP   LP       + + +P+P     +  +T   
Sbjct: 366 STLPPPSTTPAPLPPHPHPHPHSVALPPAHLPVQQQQPQQKTPLPAPPPPPAAPAQTLVP 425

Query: 81  GPDCLLCTQG----CELHEGRNHMAVHSCVARAWPG-DPQEVRHLNPLLCDPGSQVEPSW 135
            P  L+ T G       H    H +V   V     G   + + H+ P    P  Q+ P+ 
Sbjct: 426 APAHLVATAGGGSTVIAHTATTHASVIQTVNHVLQGPGGKHIAHIAPSAPSPAVQLAPAT 485

Query: 136 P 136
           P
Sbjct: 486 P 486


>gi|239755724 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 481

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 19  EACSSWNPPLFSPRPLPRLWPLPGTPFLPIRALPFSASSSGKSSLVP----SPSSSAHSG 74
           EA +  +PPL  P  LPR  PL   P L + AL  S  S   + L+      PS+ A+  
Sbjct: 145 EADTLLSPPL--PSLLPRWPPLTEEPMLILTALESSTESCMSTFLLSLCWWRPSAGAYPR 202

Query: 75  FRTPCLGPDCLLCTQ 89
            R P     C+ C Q
Sbjct: 203 LRVPSDSSLCVQCNQ 217


>gi|89363020 nuclear transcription factor, X-box binding-like 1
           [Homo sapiens]
          Length = 911

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 81  GPDCLLCTQGCELHEGRNHMAVHSCVARAWPGD 113
           GP+CL C +GC   + R    +H C+ R  PG+
Sbjct: 695 GPECLHCEEGCS--KSRPLGCLHPCILRCHPGE 725


>gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo
           sapiens]
          Length = 267

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 33/94 (35%), Positives = 35/94 (37%), Gaps = 9/94 (9%)

Query: 110 WPGDPQEVRHLNPLLCDP-GSQVEPSWPWHPGLEQAAASWVGNHVSPAHRQALRGHSLGS 168
           W G   E   L PL     GSQ  PS    P      A   G+   P       G +L  
Sbjct: 50  WGGQTLEGEWLRPLHPGAEGSQTRPSGA--PQFTTLLALAAGSPWRPWRP----GPALAG 103

Query: 169 ALRALMPGGHCPLCVPCKRGCNLRGGRGKHGPRP 202
           ALR   PG H  LC P   G  L  GR   G RP
Sbjct: 104 ALR--FPGAHGRLCAPPPPGLGLGQGRAGAGLRP 135


>gi|32699048 family with sequence similarity 70, member B [Homo
           sapiens]
          Length = 326

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 30  SPRPLPRL--WPLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHS--GFRTPCLGP 82
           +P P+P    +PLP  P       P SA +S +    PSPSSS     G   PC  P
Sbjct: 256 TPEPVPTCSSYPLPLQPCSRFPVAPSSALASSEDLQPPSPSSSGSGLPGQAPPCYAP 312


>gi|67089160 promyelocytic leukemia protein isoform 11 [Homo
           sapiens]
          Length = 781

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 39/141 (27%), Positives = 52/141 (36%), Gaps = 18/141 (12%)

Query: 25  NPPLFSPRPLPRLWPLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTPCLGPDC 84
           +PP     P PR   +    FLP      S +   +  +V   SSS  S     C+ P  
Sbjct: 470 SPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVVVI-SSSEDSDAENSCMEP-- 526

Query: 85  LLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHL------NPLLCDPGSQVEPSWPWH 138
                  E  E ++  A HS  A + P     V+ L      + L C  G+   P+WP H
Sbjct: 527 ------METAEPQSSPA-HSSPAHSSPAHSSPVQSLLRAQGASSLPC--GTYHPPAWPPH 577

Query: 139 PGLEQAAASWVGNHVSPAHRQ 159
              EQAA      H  P   Q
Sbjct: 578 QPAEQAATPDAEPHSEPPDHQ 598


>gi|27886561 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 1 [Homo sapiens]
          Length = 1075

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 39  PLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSG 74
           PL G P   ++ +P+ + SSG +S  PSP++  HSG
Sbjct: 938 PLSGPPSPQLQPMPYQSPSSGTAS-SPSPATRMHSG 972


>gi|27886559 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 4 [Homo sapiens]
          Length = 1045

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 39  PLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSG 74
           PL G P   ++ +P+ + SSG +S  PSP++  HSG
Sbjct: 938 PLSGPPSPQLQPMPYQSPSSGTAS-SPSPATRMHSG 972


>gi|27886555 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 3 [Homo sapiens]
          Length = 1065

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 39  PLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSG 74
           PL G P   ++ +P+ + SSG +S  PSP++  HSG
Sbjct: 938 PLSGPPSPQLQPMPYQSPSSGTAS-SPSPATRMHSG 972


>gi|4758804 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 2 [Homo sapiens]
          Length = 1068

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 39  PLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSG 74
           PL G P   ++ +P+ + SSG +S  PSP++  HSG
Sbjct: 938 PLSGPPSPQLQPMPYQSPSSGTAS-SPSPATRMHSG 972


>gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens]
          Length = 829

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 39/141 (27%), Positives = 52/141 (36%), Gaps = 18/141 (12%)

Query: 25  NPPLFSPRPLPRLWPLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTPCLGPDC 84
           +PP     P PR   +    FLP      S +   +  +V   SSS  S     C+ P  
Sbjct: 518 SPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVVVI-SSSEDSDAENSCMEP-- 574

Query: 85  LLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHL------NPLLCDPGSQVEPSWPWH 138
                  E  E ++  A HS  A + P     V+ L      + L C  G+   P+WP H
Sbjct: 575 ------METAEPQSSPA-HSSPAHSSPAHSSPVQSLLRAQGASSLPC--GTYHPPAWPPH 625

Query: 139 PGLEQAAASWVGNHVSPAHRQ 159
              EQAA      H  P   Q
Sbjct: 626 QPAEQAATPDAEPHSEPPDHQ 646


>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 31.2 bits (69), Expect = 0.79
 Identities = 22/53 (41%), Positives = 25/53 (47%)

Query: 26  PPLFSPRPLPRLWPLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTP 78
           P  F   PL  L PL    F+P+  LP S+ SS  S    SPSSS  S    P
Sbjct: 148 PLFFLLLPLFLLLPLFLPLFIPLFLLPSSSPSSSSSPSYSSPSSSPSSSSPLP 200


>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
           sapiens]
          Length = 257

 Score = 31.2 bits (69), Expect = 0.79
 Identities = 22/53 (41%), Positives = 25/53 (47%)

Query: 26  PPLFSPRPLPRLWPLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTP 78
           P  F   PL  L PL    F+P+  LP S+ SS  S    SPSSS  S    P
Sbjct: 148 PLFFLLLPLFLLLPLFLPLFIPLFLLPSSSPSSSSSPSYSSPSSSPSSSSPLP 200


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
          sapiens]
          Length = 367

 Score = 31.2 bits (69), Expect = 0.79
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 25 NPPLFSPRPLPRL-WPLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAHS--GFRTPCLG 81
          +PPL +   +  +  PL    + P+ A P S+SSS  SS  PSP    H+  G + P  G
Sbjct: 19 SPPLAALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATG 78


>gi|116063534 ankyrin repeat domain 27 (VPS9 domain) [Homo sapiens]
          Length = 1050

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 13/78 (16%)

Query: 111  PGDPQEVRHLNPLLCDPGSQV----EPSWPWHPGLEQAAASWVGNHVSPAHRQALRGHSL 166
            PG        N L    GS         WP  PGL Q           P HR+ LR H++
Sbjct: 974  PGRQSVTLRQNNLPAQSGSHAAEKGNSDWPERPGLTQTG---------PGHRRMLRRHTV 1024

Query: 167  GSALRALMPGGHCPLCVP 184
              A+ +  P    PL  P
Sbjct: 1025 EDAVVSQGPEAAGPLSTP 1042


>gi|148727264 transcription elongation regulator 1-like [Homo
           sapiens]
          Length = 586

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)

Query: 26  PPLFSPRPLPRL--WPLPGTPFLPIRALPFSASSSGKSSLVPSPSSSAH--SGFRTPCLG 81
           PP  +P  LP L  WP P  P LP+  LP +  S+  ++  P P+       G  +P LG
Sbjct: 67  PPPAAPL-LPGLPGWPAPSEPVLPLLPLPSAPDSAAAAAAHPFPALHGQWLFGGHSPSLG 125


>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
          Length = 1447

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 10/64 (15%)

Query: 121  NPLLCDPGSQVEPSWPWHPGLEQAAASWVGNHVSPAHRQALRGHSLGSALRALMPGGHCP 180
            NPLL  P S +EP  P+ P L Q   +    HV  A        SLG A +A  P    P
Sbjct: 1347 NPLLPPPMSAIEPKVPYTPLLSQPGPTLPKTHVKTA--------SLGLAGKARSP--LLP 1396

Query: 181  LCVP 184
            + VP
Sbjct: 1397 VSVP 1400


>gi|11415052 retinoid X receptor, beta [Homo sapiens]
          Length = 533

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 16  VGEEACSSWNPPLFSPRPLPRLWPLPGTPFLPIRALPFSASSSGKSSLVPSP 67
           +G+    S +P   SP PLP+  P P  P  P+   P +A S G S   P P
Sbjct: 73  MGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLP--PSTAPSLGGSGAPPPP 122


>gi|148612857 sickle tail isoform 3 [Homo sapiens]
          Length = 1309

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 41   PGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTPCLGP 82
            P +P LP   +P  + SSGKSS +PS S  + +    P   P
Sbjct: 1158 PTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKP 1199


>gi|148612813 sickle tail isoform 2 [Homo sapiens]
          Length = 1264

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 41   PGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTPCLGP 82
            P +P LP   +P  + SSGKSS +PS S  + +    P   P
Sbjct: 1113 PTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKP 1154


>gi|50843820 sickle tail isoform 1 [Homo sapiens]
          Length = 1943

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 41   PGTPFLPIRALPFSASSSGKSSLVPSPSSSAHSGFRTPCLGP 82
            P +P LP   +P  + SSGKSS +PS S  + +    P   P
Sbjct: 1792 PTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKP 1833


>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
          Length = 2803

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 42/162 (25%), Positives = 52/162 (32%), Gaps = 28/162 (17%)

Query: 15   EVGEEACSSWNPPLFSPRPLPRLWPLPGTPFLPIR---------ALPFSASSSGKSSLVP 65
            E  E+   S +PP   P   P LWP       P           +L F AS+ G SSL P
Sbjct: 2116 EQPEKEAQSPSPPHPIPMGSPTLWPETEAHVSPPLDSHLGPARPSLDFPASAFGFSSLQP 2175

Query: 66   SPSS--SAHSGFRTPCLGPDCLLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHLNPL 123
            +P    S       PC          G     G   +A+        PG P   RH   L
Sbjct: 2176 APPQLPSPAEPRSAPC----------GSLAFSGDRALALA-------PGPPTRTRHDEYL 2218

Query: 124  LCDPGSQVEPSWPWHPGLEQAAASWVGNHVSPAHRQALRGHS 165
                   ++ S P  P      A  + N   PA      G S
Sbjct: 2219 EVTKAPSLDSSLPQLPSPSSPGAPLLSNLPRPASPALSEGSS 2260


>gi|188219571 putative homeodomain transcription factor 2 isoform 2
           [Homo sapiens]
          Length = 747

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 20/83 (24%)

Query: 84  CLLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHLNPLLCDPGSQVEPSWPW----HP 139
           C  C   C       +  ++ CV + +  DP    HL               PW    HP
Sbjct: 375 CAECHSSCTSETDVENHQINPCVKKEYRDDPFHQSHL---------------PWLHSSHP 419

Query: 140 GLEQ-AAASWVGNHVSPAHRQAL 161
           GLE+ +A  W GN    A    L
Sbjct: 420 GLEKISAIVWEGNDCKKADMSVL 442


>gi|188219569 putative homeodomain transcription factor 2 isoform 1
           [Homo sapiens]
          Length = 751

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 20/83 (24%)

Query: 84  CLLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHLNPLLCDPGSQVEPSWPW----HP 139
           C  C   C       +  ++ CV + +  DP    HL               PW    HP
Sbjct: 379 CAECHSSCTSETDVENHQINPCVKKEYRDDPFHQSHL---------------PWLHSSHP 423

Query: 140 GLEQ-AAASWVGNHVSPAHRQAL 161
           GLE+ +A  W GN    A    L
Sbjct: 424 GLEKISAIVWEGNDCKKADMSVL 446


>gi|188219565 putative homeodomain transcription factor 2 isoform 2
           [Homo sapiens]
          Length = 747

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 20/83 (24%)

Query: 84  CLLCTQGCELHEGRNHMAVHSCVARAWPGDPQEVRHLNPLLCDPGSQVEPSWPW----HP 139
           C  C   C       +  ++ CV + +  DP    HL               PW    HP
Sbjct: 375 CAECHSSCTSETDVENHQINPCVKKEYRDDPFHQSHL---------------PWLHSSHP 419

Query: 140 GLEQ-AAASWVGNHVSPAHRQAL 161
           GLE+ +A  W GN    A    L
Sbjct: 420 GLEKISAIVWEGNDCKKADMSVL 442


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.139    0.506 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,308,303
Number of Sequences: 37866
Number of extensions: 794906
Number of successful extensions: 3070
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 2974
Number of HSP's gapped (non-prelim): 172
length of query: 232
length of database: 18,247,518
effective HSP length: 99
effective length of query: 133
effective length of database: 14,498,784
effective search space: 1928338272
effective search space used: 1928338272
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.