Guide to the Human Genome
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Name: KIAA1045 Sequence: fasta or formatted (400aa) NCBI GI: 149944593
Description:

hypothetical protein LOC23349

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         32           2
 C cysteine            3.2         13           1
 D aspartate           5.2         21           3
 E glutamate          10.8         43           3
 F phenylalanine       3.8         15           1
 G glycine             5.0         20           1
 H histidine           2.5         10           1
 I isoleucine          2.8         11           1
 K lysine              3.2         13           1
 L leucine             8.8         35           4
 M methionine          1.5          6           1
 N asparagine          1.5          6           1
 P proline             6.0         24           2
 Q glutamine           4.8         19           2
 R arginine            9.8         39           2
 S serine              9.0         36           4
 T threonine           5.2         21           1
 V valine              6.2         25           2
 W tryptophan          1.5          6           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23349 
SP100                 0.013   nuclear antigen Sp100 isoform 1 
RREB1                 0.013   ras responsive element binding protein 1 isoform 2 [...
RREB1                 0.013   ras responsive element binding protein 1 isoform 1 [...
SP140L                0.011   SP140 nuclear body protein-like 
SP140                 0.010   SP140 nuclear body protein isoform 1 
NFX1                  0.010   nuclear transcription factor, X-box binding 1 isofor...
NFX1                  0.010   nuclear transcription factor, X-box binding 1 isofor...
NFX1                  0.010   nuclear transcription factor, X-box binding 1 isofor...
MLPH                  0.010   melanophilin isoform 2 
MLPH                  0.010   melanophilin isoform 1 
FBXL19                0.009   F-box and leucine-rich repeat protein 19 
ZMYND8                0.009   zinc finger, MYND-type containing 8 isoform c 
ARFGEF1               0.009   brefeldin A-inhibited guanine nucleotide-exchange pr...
ZMYND8                0.009   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.009   zinc finger, MYND-type containing 8 isoform b 
AIRE                  0.008   autoimmune regulator isoform 1 
CDCA7                 0.008   cell division cycle associated 7 isoform 1 
CDCA7                 0.008   cell division cycle associated 7 isoform 2 
RBM19                 0.006   RNA binding motif protein 19 
RBM19                 0.006   RNA binding motif protein 19 
RBM19                 0.006   RNA binding motif protein 19 
PPARGC1B              0.006   peroxisome proliferator-activated receptor gamma, co...
BRPF3                 0.006   bromodomain and PHD finger containing, 3 
NAP1L5                0.006   nucleosome assembly protein 1-like 5 
SCNM1                 0.006   sodium channel modifier 1 
KAT2B                 0.006   K(lysine) acetyltransferase 2B 
AMFR                  0.006   autocrine motility factor receptor 
FAM184B               0.006   hypothetical protein LOC27146 
ZNHIT6                0.006   zinc finger, HIT type 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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